Os01g0121300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0121300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.81 | 0.369 | 10.8 | -0.143 | 1.12 | 0.987 | 0.204 | -1.58 | -0.0754 | 18.5 | 51 | 1003 | -- | -- |
| 62.14 | 0.367 | 10.8 | -0.218 | 1.12 | 0.6 | 0.242 | -- | -0.0635 | 18.6 | 52.06 | 996 | -- | -- |
| 61.89 | 0.366 | 10.8 | -0.144 | 1.12 | 0.996 | -- | -1.63 | -0.0752 | 18.5 | 51.04 | 980 | -- | -- |
| 61.98 | 0.367 | 10.8 | -0.243 | 1.12 | 0.49 | -- | -- | -0.0813 | 18.5 | 56 | 1048 | -- | -- |
| 126.74 | 0.524 | 10.8 | -0.188 | -- | 0.743 | -- | -0.847 | -0.107 | -- | 53 | 1176 | -- | -- |
| 68.58 | 0.388 | 10.8 | -0.334 | 1.13 | -- | 0.115 | -- | -0.0021 | 18.3 | -- | -- | -- | -- |
| 68.61 | 0.388 | 10.8 | -0.335 | 1.13 | -- | -- | -- | -0.00163 | 18.2 | -- | -- | -- | -- |
| 126.65 | 0.524 | 10.8 | -0.22 | -- | 0.515 | -- | -- | -0.12 | -- | 56 | 1191 | -- | -- |
| 63.47 | 0.371 | 10.8 | -- | 1.12 | 0.526 | -- | -- | -0.0613 | 18.5 | 55.35 | 1057 | -- | -- |
| 134.52 | 0.542 | 10.8 | -0.366 | -- | -- | -- | -- | -0.0262 | -- | -- | -- | -- | -- |
| 71.58 | 0.396 | 10.8 | -- | 1.13 | -- | -- | -- | 0.0357 | 18.2 | -- | -- | -- | -- |
| 128.32 | 0.528 | 10.8 | -- | -- | 0.571 | -- | -- | -0.103 | -- | 55 | 1192 | -- | -- |
| 138.05 | 0.548 | 10.7 | -- | -- | -- | -- | -- | 0.0144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.62 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 5 |
| 3 | 57.04 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 8 |
| 6 | 57.25 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 14 | 57.90 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 8 |
| 24 | 58.29 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 33 | 58.52 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 14 |
| 35 | 58.54 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 6 |
| 42 | 58.69 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 92 | 59.17 | humidity | 70.0 | 720 | > th | dose independent | sin | 13 | NA |
| 133 | 59.68 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 14 |
| 196 | 60.07 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 208 | 60.14 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 215 | 60.20 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 216 | 60.21 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 220 | 60.27 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 242 | 60.32 | radiation | 10.0 | 30 | < th | dose independent | rect. | 16 | 15 |
| 257 | 60.34 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 268 | 60.44 | humidity | 70.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 290 | 60.50 | humidity | 50.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 293 | 60.51 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 320 | 60.64 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 16 |
| 430 | 60.94 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 13 |
| 443 | 60.98 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 484 | 61.12 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 13 |
| 507 | 61.17 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 16 | 15 |
| 532 | 61.29 | humidity | 50.0 | 10 | > th | dose independent | rect. | 17 | 14 |
| 569 | 61.40 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 585 | 61.42 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 16 |
| 589 | 61.43 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 590 | 61.43 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 15 |
| 619 | 61.47 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 22 |
| 630 | 61.51 | humidity | 70.0 | 720 | < th | dose independent | sin | 12 | NA |
| 646 | 61.56 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 17 | 14 |
| 651 | 61.56 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 17 | 14 |
| 655 | 61.57 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 656 | 61.57 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 658 | 61.57 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 659 | 61.57 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 664 | 61.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 665 | 61.57 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 666 | 61.57 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 682 | 61.59 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 22 |
| 683 | 61.60 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 696 | 61.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 10 |
| 698 | 61.62 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 10 |
| 699 | 61.62 | wind | 9.0 | 30 | < th | dose independent | rect. | 17 | 14 |
| 700 | 61.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 17 | 14 |
| 707 | 61.64 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 10 |
| 711 | 61.64 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 10 |
| 717 | 61.66 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 10 |
| 748 | 61.70 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 753 | 61.71 | radiation | 10.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 755 | 61.71 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 10 |
| 756 | 61.71 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 760 | 61.71 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 768 | 61.73 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 778 | 61.75 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 17 | 14 |
| 782 | 61.76 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 784 | 61.76 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 794 | 61.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 14 |
| 801 | 61.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 814 | 61.80 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 7 | 10 |
| 827 | 61.81 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 828 | 61.81 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 837 | 61.83 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 838 | 61.83 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 14 |
| 840 | 61.83 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 852 | 61.85 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 855 | 61.85 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 10 |
| 897 | 61.92 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 930 | 61.96 | wind | 1.0 | 90 | > th | dose independent | rect. | 17 | 2 |
| 972 | 61.98 | temperature | 10.0 | 90 | > th | dose independent | rect. | 17 | 2 |
| 974 | 61.98 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 986 | 61.98 | wind | 1.0 | 90 | > th | dose dependent | rect. | 17 | 2 |