BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0644700 Os06g0644700|AK070101
(477 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0644700 Amino acid/polyamine transporter II family pro... 866 0.0
Os06g0275800 Amino acid/polyamine transporter II family pro... 307 1e-83
Os02g0727100 Amino acid/polyamine transporter II family pro... 298 5e-81
Os06g0633800 Amino acid/polyamine transporter II family pro... 296 2e-80
Os02g0191300 Similar to Amino acid transporter-like protein 288 4e-78
Os01g0825800 Amino acid/polyamine transporter II family pro... 266 3e-71
Os09g0432800 76 5e-14
>Os06g0644700 Amino acid/polyamine transporter II family protein
Length = 477
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/477 (93%), Positives = 446/477 (93%)
Query: 1 MNTNYSSLPLTSIELQSNQRTSEVANGVGYNGHAKISKQDSFLVDGENDDLPLIGDGPAG 60
MNTNYSSLPLTSIELQSNQRTSEVANGVGYNGHAKISKQDSFLVDGENDDLPLIGDGPAG
Sbjct: 1 MNTNYSSLPLTSIELQSNQRTSEVANGVGYNGHAKISKQDSFLVDGENDDLPLIGDGPAG 60
Query: 61 PPEGSGVPAAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRFA 120
PPEGSGVPAAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRFA
Sbjct: 61 PPEGSGVPAAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRFA 120
Query: 121 VYCRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGSLKHIGVMDQL 180
VYCRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGSLKHIGVMDQL
Sbjct: 121 VYCRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGSLKHIGVMDQL 180
Query: 181 IGHGEWDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXXXXXXXXXXXXCIIALVKVV 240
IGHGEWDNRR SPLCALEKID CIIALVKVV
Sbjct: 181 IGHGEWDNRRLLILVVLVIFLSPLCALEKIDSLSLSSAASVALAVVFVVVSCIIALVKVV 240
Query: 241 EGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHNMYKIGRI 300
EGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHNMYKIGRI
Sbjct: 241 EGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHNMYKIGRI 300
Query: 301 TTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYVIHLVLVF 360
TTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYVIHLVLVF
Sbjct: 301 TTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYVIHLVLVF 360
Query: 361 PVVHFSLRQTVDSLIFGELAPHSRKKMLTLTVVLLALIYLGSTMIPNIWVAFKFTGATTG 420
PVVHFSLRQTVDSLIFGELAPHSRKKMLTLTVVLLALIYLGSTMIPNIWVAFKFTGATTG
Sbjct: 361 PVVHFSLRQTVDSLIFGELAPHSRKKMLTLTVVLLALIYLGSTMIPNIWVAFKFTGATTG 420
Query: 421 LALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVSIIGVIGNVYSLRSKSA 477
LALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVSIIGVIGNVYSLRSKSA
Sbjct: 421 LALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVSIIGVIGNVYSLRSKSA 477
>Os06g0275800 Amino acid/polyamine transporter II family protein
Length = 448
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/438 (40%), Positives = 258/438 (58%), Gaps = 26/438 (5%)
Query: 62 PEGSGVP----------------AAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVM 105
PEGS P AVFNL+T+I+GAGIMALPATMKVLG+A GLV+IL+
Sbjct: 10 PEGSSEPLLPTKREGGGGGGEFAGAVFNLSTTIVGAGIMALPATMKVLGLAPGLVAILLA 69
Query: 106 GILSEVTIELLVRFAVYCRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGD 165
+L++ +IELLVR + A SYG V+ A G + Q+CV++NN GV+IVY+IIIGD
Sbjct: 70 ALLTDASIELLVRSSRAAGAPSYGAVMGDAFGWWGRRLLQVCVVVNNIGVMIVYMIIIGD 129
Query: 166 VMSGSLK----HIGVMDQLIGHGEWDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXX 221
V+SG+ H GV++ G W+ R +PL L+++D
Sbjct: 130 VLSGTSSGGEHHYGVLEGWFGPQWWNGRFFVLLVTTLVVFTPLACLKRVDSLSYTSAISV 189
Query: 222 XXXXXXXXXXCIIALVKVVEGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQP 281
IA+VK+++G+I MP++ PD A++ +L +P++ AY+CH+NV P
Sbjct: 190 ALAVVFVIITAGIAIVKLIKGQIPMPKLFPDVPDLASIWELFTAVPVLVTAYVCHYNVHP 249
Query: 282 IYNELKEKTPHNMYKIGRITTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFS 341
I+NELK+ P + I + VLC VY T+ GYLLFGE T SDVL NFD +LGI +S
Sbjct: 250 IHNELKD--PSQIKPIVHTSLVLCSTVYITTSFFGYLLFGESTLSDVLANFDSNLGIPYS 307
Query: 342 SILNFIVRIGYVIHLVLVFPVVHFSLRQTVD--SLIFGELAPHSRKKMLTLTVVLLALIY 399
+LN VR+ Y +HL+LVFP++ +LR +D ++ +T VLL +I+
Sbjct: 308 QMLNDAVRVSYAVHLMLVFPMIFHALRLNLDGLLFSSSSPLSSDNRRFSVMTAVLLLVIF 367
Query: 400 LGSTMIPNIWVAFKFTGATTGLALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMV 459
L + IP+IW AF+FTGAT + + FIFPA I LR D + K +++LSI M+ LA+V
Sbjct: 368 LSANFIPSIWDAFQFTGATAAVCIAFIFPAAITLR-DPHSIA-KKWDKILSIFMIVLAIV 425
Query: 460 VSIIGVIGNVYSLRSKSA 477
+++ V + YS+ + +
Sbjct: 426 SNVVAVYSDAYSMFHRKS 443
>Os02g0727100 Amino acid/polyamine transporter II family protein
Length = 448
Score = 298 bits (763), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/413 (40%), Positives = 252/413 (61%), Gaps = 11/413 (2%)
Query: 63 EGSGVPAAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRFAVY 122
+G+ AVFNL+T+I+GAGIMALPATMKVLG+ GL+ +++ +L++ +IELLVRF+
Sbjct: 34 DGASFSGAVFNLSTTIVGAGIMALPATMKVLGLVPGLILVMLAAVLTDASIELLVRFSRA 93
Query: 123 CRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGS-----LKHIGVM 177
A SYGE + A G + Q+CV++NN GV++VY+IIIGDV+SG + H GV+
Sbjct: 94 VGATSYGEAMGDAFGAFGRGLLQLCVVVNNVGVMVVYMIIIGDVLSGKSSSGGVHHHGVI 153
Query: 178 DQLIGHGEWDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXXXXXXXXXXXXCIIALV 237
+ G W+ R +PL +++D I +
Sbjct: 154 EGWFGPNRWNGRFSILVIVTLGVFTPLTCFKRVDSLKYTSALSVALAVVFVVITAGITTI 213
Query: 238 KVVEGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHNMYKI 297
K++ G+I MP++ PD ++ L P++ AYICH+NV PI+NELK+ + + I
Sbjct: 214 KLMRGQIPMPKLFPDVHDWSSTWRLFTAAPVLVTAYICHYNVHPIHNELKDHS--QIRPI 271
Query: 298 GRITTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYVIHLV 357
R + +LC+ VY T+ G+LLFGE T DVL NFD DLGI +S +L+ VR+ YV+HL+
Sbjct: 272 VRASLLLCLAVYTTTSFFGFLLFGEATLDDVLANFDSDLGIPYSLVLDDAVRVSYVLHLM 331
Query: 358 LVFPVVHFSLRQTVDSLIFGELAPHS--RKKMLTLTVVLLALIYLGSTMIPNIWVAFKFT 415
LVFP+V +LR +D L+F P S ++ +T LL +I+L + +PNIW AF+FT
Sbjct: 332 LVFPIVFHALRFNMDGLLFPSARPLSSDNRRFGAITAALLTVIFLAANFVPNIWDAFQFT 391
Query: 416 GATTGLALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVSIIGVIGN 468
GAT +A+ +IFPA +ALR D+ G + KG++ L++ M+ LA+V + + V +
Sbjct: 392 GATAAVAIAYIFPAGMALR-DRHGIAT-KGDKYLAVFMIVLALVANGVAVYSD 442
>Os06g0633800 Amino acid/polyamine transporter II family protein
Length = 458
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 257/423 (60%), Gaps = 18/423 (4%)
Query: 63 EGSGVPAAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRFAVY 122
G+ AVFNL+T+I+GAGIMALPA++K+LG+ G++ I+V+ +L+E +I++LVR +
Sbjct: 40 NGASFSGAVFNLSTTIVGAGIMALPASIKMLGIIPGILMIIVVALLTEASIDMLVRCSHQ 99
Query: 123 CRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGS----LKHIGVMD 178
+ SYG ++ +A G+ I Q V+INN GV+IVY+IIIGDV+SG+ + H G+++
Sbjct: 100 GKITSYGWLMGEAYGQWGRIALQASVVINNIGVMIVYMIIIGDVLSGTSSTGVHHRGILE 159
Query: 179 QLIGHGEWDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXXXXXXXXXXXXCIIALVK 238
G W++R +PL + +++D IA++K
Sbjct: 160 GWFGAHLWNSRAIVLLATTLFVFAPLVSFKRLDSLRYTSALSVALAVVFVVITAGIAIIK 219
Query: 239 VVEGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHNMYKIG 298
+ G ++MP++ P+ +++ L +P++ AYICH+NV I NEL+++T + I
Sbjct: 220 LFNGTVAMPKLFPELDGLSSIWKLFTAVPVLVTAYICHYNVHSIDNELEDRT--QIKPIV 277
Query: 299 RITTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYVIHLVL 358
R + LC VY T+ YLLFGE T DVL NFD +LGI FSS+ + IVR+ Y H++L
Sbjct: 278 RTSLFLCSSVYIATSFFAYLLFGEGTLDDVLANFDANLGIPFSSVFDDIVRVSYAAHVML 337
Query: 359 VFPVVHFSLRQTVDSLIFGELAPHSR------KKMLTLTVVLLALIYLGSTMIPNIWVAF 412
VFP+V F+LR +D L+F P SR K+ +T+ LL +IYL + IP+IW AF
Sbjct: 338 VFPIVFFALRLNLDGLLF----PTSRHISRDNKRFAIITISLLTVIYLAAIFIPSIWDAF 393
Query: 413 KFTGATTGLALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVSIIGVIGNVYSL 472
+FTGAT + +GFIFPA++ LR D G + K +++L++ M+ LA++ + + + + ++
Sbjct: 394 QFTGATAAVLIGFIFPAMVILR-DPYGIA-SKRDKILAVTMIVLAVLSNSVALYSDAMNI 451
Query: 473 RSK 475
K
Sbjct: 452 FRK 454
>Os02g0191300 Similar to Amino acid transporter-like protein
Length = 459
Score = 288 bits (738), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/403 (38%), Positives = 248/403 (61%), Gaps = 10/403 (2%)
Query: 63 EGSGVPAAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRFAVY 122
G+ AVFNL+T+I+GAGIMALPA++K+LG+ G++ I+++ +L+E +I++LVR +
Sbjct: 40 NGASFSGAVFNLSTTIVGAGIMALPASIKMLGIIPGILMIILVALLTEASIDMLVRCSHE 99
Query: 123 CRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGS----LKHIGVMD 178
+ SYG ++ + G+ I Q V+INN G++IVY+II+GDV+SG+ + H G+ +
Sbjct: 100 GKITSYGWLMGETFGQWGRIALQASVVINNIGMMIVYMIIVGDVLSGTSTSGVHHRGIFE 159
Query: 179 QLIGHGEWDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXXXXXXXXXXXXCIIALVK 238
G W++R PL + +++D IA+V+
Sbjct: 160 GWFGPHLWNSRPVVLLATTLFVFGPLVSFKRLDSLRYTSALSVALAVVFVVITAGIAIVR 219
Query: 239 VVEGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHNMYKIG 298
++EG + +P++ P+ ++ +L +P++ AYICH+NV I NEL+++T I
Sbjct: 220 LIEGTVEIPKLFPELDGTNSIWELFTAVPVVVTAYICHYNVHSIDNELEDRT--QTKPIV 277
Query: 299 RITTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYVIHLVL 358
+ + LC VY T+ YLLFGE T +DVL NFD +L I FSS+ N +VR+ YV+H++L
Sbjct: 278 QTSLALCSSVYIATSFFAYLLFGEGTLADVLANFDSNLHIPFSSVFNDVVRVSYVVHIML 337
Query: 359 VFPVVHFSLRQTVDSLIFGELAPHSR--KKMLTLTVVLLALIYLGSTMIPNIWVAFKFTG 416
VFP+V F+LR +D L+F SR ++ +T LLA+IYL + IP+IW AF+FTG
Sbjct: 338 VFPIVFFALRLNLDGLLFPTARHISRDNRRFAIITGSLLAVIYLAAIFIPSIWDAFQFTG 397
Query: 417 ATTGLALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMV 459
AT + +GFIFPA+I LR D G + K +++L++ M+ LA++
Sbjct: 398 ATAAVLIGFIFPAMIILR-DPYGIA-TKRDKILALTMIVLAVL 438
>Os01g0825800 Amino acid/polyamine transporter II family protein
Length = 456
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 227/420 (54%), Gaps = 11/420 (2%)
Query: 59 AGPPEGSGVPAAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVR 118
+G G+ V AVFN++TSIIGAGIM++PA M+VLGV L+ I + LS+ ++E ++R
Sbjct: 27 SGGGHGASVSGAVFNVSTSIIGAGIMSIPAAMRVLGVLPALLLIATVAALSDASVEFMLR 86
Query: 119 FAVYCRAL-SYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGSL----KH 173
+ + SY ++ A GR + +C+ G L+VYLIIIGDV+SGS +H
Sbjct: 87 YTGWDSGPPSYAGIMGDAFGRAGAKALNVCIAFTTTGTLVVYLIIIGDVLSGSAGAGDEH 146
Query: 174 IGVMDQLIGHGEWDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXXXXXXXXXXXXCI 233
GV+ +L G W R PL ++D
Sbjct: 147 AGVLQELFGAQWWTARELVILVTAIVVLLPLVLRRRVDSLKFTSAVSILLAVVFMFISLG 206
Query: 234 IALVKVVEGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHN 293
IA+ + G MPRM PDFS ++ +L +PI+ A+ HFNV PI EL + + +
Sbjct: 207 IAVYALFTGTAKMPRMLPDFSRLSSPFELFTAVPIVVVAFTFHFNVHPIRTELSKTS--D 264
Query: 294 MYKIGRITTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYV 353
M RI+ VLC +YA G+LLFG+ T +DVL NFD+ G LN R+ Y
Sbjct: 265 MKAAVRISLVLCAAIYAAVGFFGFLLFGDATMADVLANFDRSSGAGVPQALNDAARLSYA 324
Query: 354 IHLVLVFPVVHFSLRQTVDSLIFGELAP--HSRKKMLTLTVVLLALIYLGSTMIPNIWVA 411
+HLVLVFP++HFSLR VD L+F P ++ + LT VL+A++Y + IP+IW
Sbjct: 325 LHLVLVFPLLHFSLRVNVDELLFPGRRPLATDTRRFVALTAVLMAVLYALAIAIPSIWTL 384
Query: 412 FKFTGATTGLALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVSIIGVIGNVYS 471
F+++G+T + + IFP I LR D G + K ++ L+ M+ LA++ S I + NV S
Sbjct: 385 FEYSGSTFAVCISLIFPGAIVLR-DAHGIAKTK-DKALAATMIALAVITSSIAIASNVMS 442
>Os09g0432800
Length = 308
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 49/187 (26%)
Query: 234 IALVKVVEGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHN 293
IA +K+++G+I MP++ PD ++ L P++ H ++PI
Sbjct: 77 IATIKLMKGQIPMPKLFPDVHDWSSTWRLPTAAPVLLKD---HSLIRPIV---------- 123
Query: 294 MYKIGRITTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYV 353
R + +L +VVY T+ G+LLFGE T D
Sbjct: 124 -----RASLLLGLVVYTTTSFFGFLLFGEATLDD-------------------------- 152
Query: 354 IHLVLVFPVVHFSLRQTVDSLIFGELAPHS--RKKMLTLTVVLLALIYLGSTMIPNIWVA 411
+LVFP+V +LR +D L+F P S ++ +T LL +I+L + +PNIW A
Sbjct: 153 ---MLVFPIVFRALRFNMDGLLFPSARPFSCDNRRFGAITAELLTVIFLAANFVPNIWDA 209
Query: 412 FKFTGAT 418
F+FTG++
Sbjct: 210 FQFTGSS 216
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.141 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,816,314
Number of extensions: 566070
Number of successful extensions: 1410
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1392
Number of HSP's successfully gapped: 7
Length of query: 477
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 372
Effective length of database: 11,553,331
Effective search space: 4297839132
Effective search space used: 4297839132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)