Os06g0275800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter II family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0275800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Amino acid/polyamine transporter II family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.79 | 0.409 | 11.1 | -0.267 | 1.29 | 0.699 | -0.499 | 0.575 | 0.277 | 9.54 | 81.99 | 1167 | -- | -- |
| 76.15 | 0.406 | 11.1 | -0.314 | 1.29 | 0.743 | -0.591 | -- | 0.269 | 9.57 | 82 | 1178 | -- | -- |
| 76.58 | 0.408 | 11.1 | -0.265 | 1.31 | 0.682 | -- | 0.877 | 0.285 | 9.48 | 81.63 | 1129 | -- | -- |
| 77.44 | 0.41 | 11.1 | -0.319 | 1.3 | 0.759 | -- | -- | 0.272 | 9.53 | 82 | 1176 | -- | -- |
| 161.14 | 0.591 | 11.1 | -0.294 | -- | 0.638 | -- | -0.15 | 0.219 | -- | 99.57 | 1466 | -- | -- |
| 87.91 | 0.44 | 11.1 | -0.197 | 1.18 | -- | -0.645 | -- | 0.248 | 9.23 | -- | -- | -- | -- |
| 89.35 | 0.443 | 11.1 | -0.222 | 1.19 | -- | -- | -- | 0.246 | 9.14 | -- | -- | -- | -- |
| 161.14 | 0.591 | 11.1 | -0.26 | -- | 0.62 | -- | -- | 0.227 | -- | 144.4 | 1471 | -- | -- |
| 80.33 | 0.417 | 11.1 | -- | 1.3 | 0.764 | -- | -- | 0.25 | 9.55 | 146.8 | 1176 | -- | -- |
| 170.98 | 0.611 | 11.1 | -0.225 | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
| 90.64 | 0.445 | 11.1 | -- | 1.19 | -- | -- | -- | 0.271 | 9.16 | -- | -- | -- | -- |
| 162.92 | 0.594 | 11.1 | -- | -- | 0.603 | -- | -- | 0.256 | -- | 160.8 | 1478 | -- | -- |
| 172.31 | 0.613 | 11.1 | -- | -- | -- | -- | -- | 0.277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.07 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 2 | 71.11 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 7 | 72.02 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 4 |
| 8 | 72.13 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 12 |
| 21 | 72.75 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 1 |
| 24 | 72.89 | humidity | 90 | 720 | < th | dose independent | rect. | 20 | 4 |
| 28 | 72.94 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 2 |
| 29 | 72.96 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 10 |
| 36 | 73.11 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 4 |
| 39 | 73.12 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 68 | 73.88 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 13 |
| 81 | 74.06 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 7 |
| 82 | 74.07 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 116 | 74.57 | humidity | 70 | 720 | < th | dose independent | rect. | 16 | 16 |
| 128 | 74.67 | humidity | 70 | 720 | < th | dose independent | rect. | 16 | 4 |
| 247 | 75.50 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 16 |
| 250 | 75.54 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 253 | 75.56 | humidity | 90 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 256 | 75.57 | humidity | 50 | 720 | > th | dose dependent | sin | 15 | NA |
| 278 | 75.69 | humidity | 90 | 720 | < th | dose dependent | sin | 14 | NA |
| 298 | 75.79 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 308 | 75.87 | humidity | 70 | 720 | < th | dose independent | sin | 13 | NA |
| 457 | 76.47 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 498 | 76.54 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 15 |
| 791 | 77.12 | humidity | 80 | 720 | < th | dose independent | rect. | 12 | 10 |
| 846 | 77.23 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 12 |
| 894 | 77.32 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 902 | 77.33 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 917 | 77.36 | temperature | 30 | 720 | < th | dose independent | sin | 13 | NA |
| 941 | 77.40 | humidity | 80 | 1440 | > th | dose independent | sin | 22 | NA |
| 958 | 77.44 | humidity | 80 | 1440 | < th | dose independent | sin | 23 | NA |
| 997 | 77.48 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 2 |