Os01g0825800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter II family protein.
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Os01g0825800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Amino acid/polyamine transporter II family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 331.78 | 0.856 | 10.8 | 1.98 | 0.941 | -0.543 | 3.53 | -4.68 | -0.93 | 11.2 | 997.9 | 18120 | -- | -- |
| 357.48 | 0.881 | 10.9 | 2.25 | 0.949 | -1.62 | 3.67 | -- | -1.16 | 11 | 1004 | 11917 | -- | -- |
| 378.98 | 0.907 | 10.8 | 2.12 | 0.986 | -0.529 | -- | -4.7 | -0.942 | 9.88 | 997.9 | 18159 | -- | -- |
| 402.18 | 0.934 | 10.8 | 2.34 | 1.01 | -1.65 | -- | -- | -1.11 | 9.95 | 1005 | 12790 | -- | -- |
| 438.46 | 0.975 | 10.8 | 2.1 | -- | -0.511 | -- | -4.65 | -0.918 | -- | 997.8 | 18172 | -- | -- |
| 415.44 | 0.956 | 10.8 | 1.93 | 0.933 | -- | 3.51 | -- | -0.888 | 11.1 | -- | -- | -- | -- |
| 462.08 | 1.01 | 10.8 | 2.06 | 0.987 | -- | -- | -- | -0.884 | 9.8 | -- | -- | -- | -- |
| 461.76 | 1 | 10.9 | 2.32 | -- | -1.68 | -- | -- | -1.12 | -- | 1005 | 11390 | -- | -- |
| 540.62 | 1.08 | 10.9 | -- | 0.987 | -1.26 | -- | -- | -1.31 | 9.74 | 1006 | 11479 | -- | -- |
| 520.2 | 1.07 | 10.8 | 2.05 | -- | -- | -- | -- | -0.883 | -- | -- | -- | -- | -- |
| 573.79 | 1.12 | 10.8 | -- | 0.982 | -- | -- | -- | -1.11 | 9.65 | -- | -- | -- | -- |
| 598.61 | 1.14 | 10.9 | -- | -- | -1.24 | -- | -- | -1.3 | -- | 1005 | 11315 | -- | -- |
| 630.92 | 1.17 | 10.9 | -- | -- | -- | -- | -- | -1.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 333.34 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 5 | 336.65 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 6 | 337.60 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 7 | 337.66 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 9 |
| 18 | 339.63 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 19 | 339.83 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 20 | 339.83 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 40 | 340.57 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 20 | 7 |
| 75 | 341.26 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 81 | 341.33 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 6 |
| 117 | 341.74 | atmosphere | 1000 | 14400 | < th | dose dependent | sin | 11 | NA |
| 219 | 342.41 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 286 | 342.71 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 6 | 22 |
| 293 | 342.73 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 9 | 19 |
| 304 | 342.76 | atmosphere | 1000 | 14400 | < th | dose dependent | no | NA | NA |
| 339 | 342.80 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 22 | 23 |
| 345 | 342.82 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 24 | 23 |
| 371 | 342.93 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 6 | 6 |
| 380 | 342.96 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 10 |
| 401 | 343.05 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 437 | 343.19 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 450 | 343.25 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 460 | 343.29 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 465 | 343.30 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 466 | 343.30 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 473 | 343.33 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 567 | 343.71 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 621 | 343.94 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 672 | 344.17 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 19 | 17 |
| 673 | 344.17 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 19 | 17 |
| 675 | 344.18 | atmosphere | 1000 | 14400 | > th | dose independent | sin | 11 | NA |
| 676 | 344.18 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 682 | 344.19 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 688 | 344.21 | atmosphere | 1000 | 14400 | < th | dose independent | sin | 11 | NA |
| 728 | 344.31 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 23 | 13 |
| 738 | 344.32 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 23 | 13 |
| 760 | 344.36 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 10 | 17 |
| 804 | 344.44 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 10 | 17 |
| 967 | 344.69 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 10 |
| 999 | 344.74 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 2 |