BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0825800 Os01g0825800|AK102220
(456 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G56200.1 | chr3:20850087-20851779 FORWARD LENGTH=436 338 3e-93
AT5G38820.1 | chr5:15543481-15545182 FORWARD LENGTH=457 328 4e-90
AT3G30390.1 | chr3:11977112-11978827 REVERSE LENGTH=461 325 3e-89
AT2G40420.1 | chr2:16877300-16878982 FORWARD LENGTH=441 320 1e-87
AT1G80510.1 | chr1:30273100-30274569 FORWARD LENGTH=490 209 2e-54
>AT3G56200.1 | chr3:20850087-20851779 FORWARD LENGTH=436
Length = 435
Score = 338 bits (868), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/403 (45%), Positives = 250/403 (62%), Gaps = 1/403 (0%)
Query: 40 FNVSTSIIGAGIMSIPAAMRVLGVLPALLLIATVAALSDASVEFMLRYTGWDSGPPSYAG 99
FNVSTSIIGAGIMS+PAA +VLG++PA L+I +A LS SV F+++ T +YAG
Sbjct: 30 FNVSTSIIGAGIMSMPAAFKVLGIVPAFLIITIIAWLSTISVGFLMKST-LAGESTTYAG 88
Query: 100 IMGDAFGRAGAKALNVCIAFTTTGTLVVYLIIIGDVLSGSAGAGDEHAGVLQELFGAQWW 159
+M ++FG+ G+ A+ + T G ++++ IIIGDVLSG+ G EH GVLQE FG+ WW
Sbjct: 89 VMKESFGKTGSIAVQIATMVATFGCMIIFSIIIGDVLSGNENGGPEHIGVLQEWFGSYWW 148
Query: 160 TAREXXXXXXXXXXXXXXXXXXXXDSLKFTSAVSILLAVVFMFISLGIAVYALFTGTAKM 219
R + L +SAVS LLAV+F+ IS +A+ AL G K
Sbjct: 149 NTRIFALLFVYGFVLLPLVLRRRVERLAISSAVSFLLAVLFVVISSVLAISALVNGQTKN 208
Query: 220 PRMLPDFSRLSSPFELFTAVPIVVVAFTFHFNVHPIRTELSKTSDMKAAVRISLVLCAAI 279
PR+ P+ S S ++LFTA P++V AFTFHFNVHPI EL + A +IS++LCAAI
Sbjct: 209 PRLFPELSNGGSFWQLFTASPVIVTAFTFHFNVHPIGFELKDPLQVIPATKISVILCAAI 268
Query: 280 YAAVXXXXXXXXXDATMADVLANFDRSSGAGVPQALNDAARLSYAXXXXXXXXXXXXXXR 339
Y A DATM+D+L NFD+SSG+ + LND RLSY R
Sbjct: 269 YFATGLFGYLLFGDATMSDILVNFDQSSGSSIGSLLNDIVRLSYVLHLMLVFPLLNFSLR 328
Query: 340 VNVDELLFPGRRPLATDTRRFVALTAVLMAVLYALAIAIPSIWTLFEYSGSTFAVCISLI 399
N+DELL+P + L DT+RF+ LT L+ + AIA+P IW F++ GST V I+ I
Sbjct: 329 ANLDELLYPKKPSLEKDTKRFIGLTLALLICCFLSAIAVPDIWYFFQFMGSTITVSIAFI 388
Query: 400 FPGAIVLRDAHGIAKTKDKALAATMIALAVITSSIAIASNVMS 442
FP AIVLR+ HG++ +++K +AA M+ LAV TS IAI++N+ S
Sbjct: 389 FPAAIVLRNIHGVSTSREKIVAAIMLVLAVATSIIAISTNLYS 431
>AT5G38820.1 | chr5:15543481-15545182 FORWARD LENGTH=457
Length = 456
Score = 328 bits (841), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/402 (43%), Positives = 244/402 (60%), Gaps = 3/402 (0%)
Query: 40 FNVSTSIIGAGIMSIPAAMRVLGVLPALLLIATVAALSDASVEFMLRYTGWDSGPPSYAG 99
FN++T+IIGAGIM++PA M++LG++P + +I +A L+DAS+EF+LR++ SY G
Sbjct: 42 FNLATTIIGAGIMALPATMKILGLIPGITIIVLMAFLTDASIEFLLRFSNI-GNQRSYGG 100
Query: 100 IMGDAFGRAGAKALNVCIAFTTTGTLVVYLIIIGDVLSGSAGAGDEHAGVLQELFGAQWW 159
+M D+FG+ G L V I + G L+VY+IIIGDVL+G G HAG+L+ FG WW
Sbjct: 101 VMDDSFGKCGRIMLQVSILVSNIGVLIVYMIIIGDVLAGKNEYGIHHAGMLEGWFGISWW 160
Query: 160 TAREXXXXXXXXXXXXXXXXXXXXDSLKFTSAVSILLAVVFMFISLGIAVYALFTGTAKM 219
R DSL+FTSA+S+ LAVVF+ I+ GI + LFT M
Sbjct: 161 NRRTFVLLVTTLTVFAPLTCFKRIDSLRFTSAISVALAVVFLVITAGITIIKLFTDGLMM 220
Query: 220 PRMLPDFSRLSSPFELFTAVPIVVVAFTFHFNVHPIRTELSKTSDMKAAVRISLVLCAAI 279
PR+LP+ + LSS ++LFT VP++V A+ H+NVH I+ EL S +K VR +L +C+++
Sbjct: 221 PRLLPNVTDLSSFWKLFTVVPVLVNAYICHYNVHSIQNELEDPSRIKPVVRSALAMCSSV 280
Query: 280 YAAVXXXXXXXXXDATMADVLANFDRSSGAGVPQALNDAARLSYAXXXXXXXXXXXXXXR 339
Y D T+ DVLANFD G LNDA R SYA R
Sbjct: 281 YVMTSLFGYLLFGDGTLDDVLANFDTDLGIPFGSVLNDAVRFSYAAHLMLVFPVVFYPLR 340
Query: 340 VNVDELLFPGRRPLATDTR--RFVALTAVLMAVLYALAIAIPSIWTLFEYSGSTFAVCIS 397
+N+D L+FP PL + RF ++TA L+AV++ A IPSIW F+++G+T AVCI
Sbjct: 341 INIDGLIFPTAPPLTSSESDLRFGSITAGLIAVIFLGANFIPSIWDAFQFTGATAAVCIG 400
Query: 398 LIFPGAIVLRDAHGIAKTKDKALAATMIALAVITSSIAIASN 439
IFP A++L+D H A +DK +A MI LAV +++IAI S+
Sbjct: 401 FIFPAAVILKDRHNQATKRDKTIAICMIVLAVFSNAIAIYSD 442
>AT3G30390.1 | chr3:11977112-11978827 REVERSE LENGTH=461
Length = 460
Score = 325 bits (833), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 253/443 (57%), Gaps = 11/443 (2%)
Query: 3 PPASTGKCTGAAAGEVEEPLLPEFXXXXXX------XXXXXXXFNVSTSIIGAGIMSIPA 56
P ++ C+ ++ PLLPE FN++T+IIGAGIM++PA
Sbjct: 11 PRRNSSTCSN----DIAAPLLPECHGDEVAHDEFNGASFSGAVFNLATTIIGAGIMALPA 66
Query: 57 AMRVLGVLPALLLIATVAALSDASVEFMLRYTGWDSGPPSYAGIMGDAFGRAGAKALNVC 116
M++LG+ + +I +A L+DAS+EF+LR++ SY G+MG +FG G L V
Sbjct: 67 TMKILGLGLGITMIVVMAFLTDASIEFLLRFSKAGKNR-SYGGLMGGSFGNPGRILLQVA 125
Query: 117 IAFTTTGTLVVYLIIIGDVLSGSAGAGDEHAGVLQELFGAQWWTAREXXXXXXXXXXXXX 176
+ G L+VY+IIIGDVL+G G H GVL+ FG WW R
Sbjct: 126 VLVNNIGVLIVYMIIIGDVLAGKTEDGIHHFGVLEGWFGHHWWNGRAAILLITTLGVFAP 185
Query: 177 XXXXXXXDSLKFTSAVSILLAVVFMFISLGIAVYALFTGTAKMPRMLPDFSRLSSPFELF 236
DSLKFTSA+S+ LAVVF+ I+ GI++ L +G MPR+LPD + L+S + LF
Sbjct: 186 LACFKRIDSLKFTSALSVALAVVFLIITAGISIMKLISGGVAMPRLLPDVTDLTSFWNLF 245
Query: 237 TAVPIVVVAFTFHFNVHPIRTELSKTSDMKAAVRISLVLCAAIYAAVXXXXXXXXXDATM 296
T VP++V AF H+NVH I+ EL S ++ VR +L+LC+++Y D T+
Sbjct: 246 TVVPVLVTAFICHYNVHSIQNELEDPSQIRPVVRSALMLCSSVYIMTSIFGFLLFGDDTL 305
Query: 297 ADVLANFDRSSGAGVPQALNDAARLSYAXXXXXXXXXXXXXXRVNVDELLFPGRRPLATD 356
DVLANFD G LNDA R+SYA R+N+D LLFP R L+T
Sbjct: 306 DDVLANFDTDLGIPFGSILNDAVRVSYALHLMLVFPIVFYPLRINIDGLLFPSARSLSTS 365
Query: 357 TRRFVALTAVLMAVLYALAIAIPSIWTLFEYSGSTFAVCISLIFPGAIVLRDAHGIAKTK 416
RF LTA L++V++ A IPSIW F+++G+T AVC+ IFP +I+L+D H A +
Sbjct: 366 NVRFGCLTAGLISVIFLGANFIPSIWDAFQFTGATAAVCLGFIFPASIILKDRHDKATNR 425
Query: 417 DKALAATMIALAVITSSIAIASN 439
D LA MI LAV++++IAI S+
Sbjct: 426 DTTLAIFMIVLAVLSNAIAIYSD 448
>AT2G40420.1 | chr2:16877300-16878982 FORWARD LENGTH=441
Length = 440
Score = 320 bits (819), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/404 (43%), Positives = 249/404 (61%), Gaps = 2/404 (0%)
Query: 40 FNVSTSIIGAGIMSIPAAMRVLGVLPALLLIATVAALSDASVEFMLRYTGWDSGPPSYAG 99
FN+STSI+GAGIM+IPAA +VLGV+P+L +I +A LS+ S F+++ + +YAG
Sbjct: 31 FNISTSIVGAGIMAIPAAFKVLGVIPSLSIIVIIAWLSNVSAGFLMK-SSLAGESTTYAG 89
Query: 100 IMGDAFGRAGAKALNVCIAFTTTGTLVVYLIIIGDVLSGSAGAGDEHAGVLQELFGAQWW 159
+M ++FG++GA A+ V T G+++++ IIIGDV+SG+ G H G+LQE FG+ WW
Sbjct: 90 VMKESFGKSGAVAVTVVTMVVTFGSMIIFSIIIGDVISGNEKDGIIHLGLLQEWFGSHWW 149
Query: 160 TAREXXXXXXXXXXXXXXXXXXXXDSLKFTSAVSILLAVVFMFISLGIAVYALFTGTAKM 219
R + L F+SA+S LLA++F+ IS +A+ AL G K
Sbjct: 150 NTRFFGLLFIFVFLFLPLVLCRRVERLAFSSAISFLLALLFVVISSVLAIIALVQGKTKP 209
Query: 220 PRMLPDFSRLS-SPFELFTAVPIVVVAFTFHFNVHPIRTELSKTSDMKAAVRISLVLCAA 278
PR+ P+ + S F LFTA P++V AFTFHFNVHP+ EL ++ +A RIS++LCA
Sbjct: 210 PRLFPELNDGGLSFFSLFTASPVIVTAFTFHFNVHPVAFELKDPLNVLSATRISVILCAT 269
Query: 279 IYAAVXXXXXXXXXDATMADVLANFDRSSGAGVPQALNDAARLSYAXXXXXXXXXXXXXX 338
IY+A D+TM DVL NFD+S+ + V LND RLSYA
Sbjct: 270 IYSATGLFCYLLFGDSTMTDVLMNFDQSTSSSVGSLLNDIVRLSYAIHLMLVFPLLNFSL 329
Query: 339 RVNVDELLFPGRRPLATDTRRFVALTAVLMAVLYALAIAIPSIWTLFEYSGSTFAVCISL 398
R N+DELLFP + L D +RF ALT L+ + AIAIP IW F++ GST V I+
Sbjct: 330 RANLDELLFPMKLSLVEDNKRFFALTFPLLISCFLGAIAIPDIWYFFQFLGSTSTVSIAF 389
Query: 399 IFPGAIVLRDAHGIAKTKDKALAATMIALAVITSSIAIASNVMS 442
IFP AIVLR+ +G + ++K +A+ M+ LAV TS IAI++N+ +
Sbjct: 390 IFPAAIVLRNVNGFSTLREKIVASVMLVLAVATSIIAISTNIYT 433
>AT1G80510.1 | chr1:30273100-30274569 FORWARD LENGTH=490
Length = 489
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 206/407 (50%), Gaps = 9/407 (2%)
Query: 40 FNVSTSIIGAGIMSIPAAMRVLGVLPALLLIATVAALSDASVEFMLRYTGWDSGPPSYAG 99
FN++TSIIGAGIM++PA M+VLG++ +LI +A LS+ SVE ++R++ SY
Sbjct: 82 FNLTTSIIGAGIMALPATMKVLGLVLGFVLIILMALLSEISVELLVRFSVLYKSK-SYGE 140
Query: 100 IMGDAFGRAGAKALNVCIAFTTTGTLVVYLIIIGDVLSGSAGAGDEHAGVLQELFGAQWW 159
++ A G+ +CI G LVVYLII+GDV+SGS H GVL + G +W
Sbjct: 141 VVQFALGKTARVLSEICIIVNNGGVLVVYLIIMGDVMSGSL----HHIGVLDQWLGNGFW 196
Query: 160 TAREXXXXXXXXXXXXXXXXXXXXDSLKFTSAVSILLAVVFMFISLGIAVYALFTGTAKM 219
R+ DSL TSA S+ LAVVF+ + +A L GT
Sbjct: 197 DHRKVLILIVMVIFLAPLCALNKIDSLSVTSAASVALAVVFVVVCFVVATIKLIEGTIDP 256
Query: 220 PRMLPDFSRLSSPFELFTAVPIVVVAFTFHFNVHPIRTELSKTS--DMKAAVRISLVLCA 277
PR+ PDF + +L +PI+ A+ HFNV PI EL S M RI+ +C
Sbjct: 257 PRLSPDFGSKQAILDLLVVIPIMSNAYVCHFNVQPIYNELEGRSPHKMNRVGRITTAICV 316
Query: 278 AIYAAVXXXXXXXXXDATMADVLANFDRSSGAGVPQALNDAARLSYAXXXXXXXXXXXXX 337
+YA+ T +D+L NFD+ G A+N R+ Y
Sbjct: 317 VVYASTAVSGYLLFGKDTESDILTNFDQDLGIRFSSAVNYIVRIGYILHLVLVFPVIHFS 376
Query: 338 XRVNVDELLFPGRRPLATDTRRFVALTAVLMAVLYALAIAIPSIWTLFEYSGSTFAVCIS 397
R V+ LLF G PL+ +R + LT VL+A++Y + IP+IWT F+++G+T AV +
Sbjct: 377 LRETVNTLLFEGSPPLSESKKRSLGLTVVLLALIYIGSTMIPNIWTAFKFTGATSAVSLG 436
Query: 398 LIFPGAIVLR--DAHGIAKTKDKALAATMIALAVITSSIAIASNVMS 442
FP I LR +++++ M+ LAV+ S + N+ S
Sbjct: 437 FTFPALIALRLGKQSNSLSFVERSVSWLMLILAVVVSIVGTIGNIYS 483
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,329,262
Number of extensions: 237219
Number of successful extensions: 660
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 647
Number of HSP's successfully gapped: 5
Length of query: 456
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 354
Effective length of database: 8,310,137
Effective search space: 2941788498
Effective search space used: 2941788498
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 113 (48.1 bits)