BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0638500 Os06g0638500|015-066-F12
(255 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0638500 Protein kinase domain containing protein 372 e-103
Os09g0110100 Protein kinase-like domain containing protein 173 8e-44
Os01g0514700 Protein kinase domain containing protein 125 3e-29
Os12g0235700 Protein kinase domain containing protein 90 2e-18
Os08g0200500 Protein kinase-like domain containing protein 78 5e-15
Os07g0541800 Similar to KI domain interacting kinase 1 77 2e-14
Os01g0642700 75 3e-14
Os07g0542300 72 4e-13
>Os06g0638500 Protein kinase domain containing protein
Length = 255
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/237 (82%), Positives = 196/237 (82%)
Query: 1 WKDDGRFAGRFGASSPLQLSLEARLRIARGVARGLAFIHEKKGVHGNVKPSNILLGADME 60
WKDDGRFAGRFGASSPLQLSLEARLRIARGVARGLAFIHEKKGVHGNVKPSNILLGADME
Sbjct: 1 WKDDGRFAGRFGASSPLQLSLEARLRIARGVARGLAFIHEKKGVHGNVKPSNILLGADME 60
Query: 61 PWIGDFGLDRLLSGEAVHRSTGASARLFGSKRSMHSTSSLPDLSQMXXXXXXXXXXXXXX 120
PWIGDFGLDRLLSGEAVHRSTGASARLFGSKRSMHSTSSLPDLSQM
Sbjct: 61 PWIGDFGLDRLLSGEAVHRSTGASARLFGSKRSMHSTSSLPDLSQMPGAGASPCGSSSAA 120
Query: 121 XXXXXXXXXXXYQAPECLKNLRPNTKWDVYSFGMVLLELLSGRVYSEVELCQWHAGFVVE 180
YQAPECLKNLRPNTKWDVYSFGMVLLELLSGRVYSEVELCQWHAGFVVE
Sbjct: 121 TSAAAAAAPPPYQAPECLKNLRPNTKWDVYSFGMVLLELLSGRVYSEVELCQWHAGFVVE 180
Query: 181 ERSRLLRMADPTLRGEADGREDXXXXXXXXXXXXXXXXPGKRPAMRDAVLVLDRIPC 237
ERSRLLRMADPTLRGEADGRED PGKRPAMRDAVLVLDRIPC
Sbjct: 181 ERSRLLRMADPTLRGEADGREDALLACFKLAFACCAMAPGKRPAMRDAVLVLDRIPC 237
>Os09g0110100 Protein kinase-like domain containing protein
Length = 794
Score = 173 bits (439), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 125/214 (58%), Gaps = 12/214 (5%)
Query: 24 RLRIARGVARGLAFIHEKKGVHGNVKPSNILLGADMEPWIGDFGLDRLL-SGEAVHRSTG 82
RLRIARGVARGLAF+H+KK VHGNV+PSNILL ADMEP + D G+ RL+ G+ + +
Sbjct: 585 RLRIARGVARGLAFLHDKKFVHGNVRPSNILLDADMEPLLADLGIHRLIRGGDTLKPAAA 644
Query: 83 ASARLFGSKRSMHSTSSLPDLSQMXXXXXXXXXXXXXXXXXXXXXXXXXYQAPECLKNLR 142
A A FGSKR S SLPDLS YQAPE +KN +
Sbjct: 645 AGAGRFGSKR---SAKSLPDLSP------PPGASPLAGPSGSGDTAVAQYQAPEGVKNPK 695
Query: 143 PNTKWDVYSFGMVLLELLSGRVYSEVELCQWHAGFVVEERSRLLRMADPTLRGEADGRED 202
N KWDVYS GMVLLEL++GR + +ELCQW + E ++ R+AD LRGE GRE+
Sbjct: 696 ANAKWDVYSLGMVLLELVAGRALTSLELCQWSSA--EESGQQVFRLADAALRGEMAGREE 753
Query: 203 XXXXXXXXXXXXXXXXPGKRPAMRDAVLVLDRIP 236
P KRP+M++ V +DRIP
Sbjct: 754 ALASCLRLGFACCAMAPHKRPSMKEVVAAMDRIP 787
>Os01g0514700 Protein kinase domain containing protein
Length = 705
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 123/239 (51%), Gaps = 39/239 (16%)
Query: 9 GRFGASSPLQLSLEARLRIARGVARGLAFIHE---KKGVHGNVKPSNILLGADMEPWIGD 65
G+ G + L + RL+I +GVA+GL+F+HE KK +HG+++P+N+LLG++MEP+I D
Sbjct: 490 GKPGTMTFTPLPWDGRLKIMQGVAKGLSFLHEFSPKKYIHGDLRPNNVLLGSNMEPYISD 549
Query: 66 FGLDRLLS---GEAVHRSTGASARLFGSKRSMHSTSSLPDLSQMXXXXXXXXXXXXXXXX 122
FGL RL + G +S A S++S S S L
Sbjct: 550 FGLGRLANIAGGSPFTQSDHAGIEKAQSQQSDASVSPL---------------------- 587
Query: 123 XXXXXXXXXYQAPECLKNLRPNTKWDVYSFGMVLLELLSGRV------YSEVELCQWHAG 176
YQAPE LK L+P+ KWDVYS+G++LLE+++GR +++L QW
Sbjct: 588 ---VGKGSCYQAPEALKTLKPSQKWDVYSYGVILLEMITGRSPVVLLETMQMDLVQW-VQ 643
Query: 177 FVVEERSRLLRMADPTLRGEADGREDXXXXXXXXXXXXXXXXPGKRPAMRDAVLVLDRI 235
F +EE+ + DP+L +++ RED P +RP+MR LD +
Sbjct: 644 FCIEEKKPSADVLDPSLARDSE-REDEMIAALKVALACVQANPERRPSMRHVAETLDHL 701
>Os12g0235700 Protein kinase domain containing protein
Length = 269
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 19 LSLEARLRIARGVARGLAFIHE---KKGVHGNVKPSNILLGADMEPWIGDFGLDRLLSGE 75
LS RL+IARG ARGLA++HE ++ VHG VKPSNILL AD P + DFGL RLL+
Sbjct: 19 LSWSTRLKIARGAARGLAYLHECSPRRFVHGEVKPSNILLDADFTPRVADFGLARLLA-- 76
Query: 76 AVHRSTGASARLFGSKRSMHSTSSLPDLSQMXXXXXXXXXXXXXXXXXXXXXXXXXYQAP 135
G + + + + S+ L Y+AP
Sbjct: 77 ----VAGCADDVVDAPPAAPSSGGL--------LGGAIPYAAKPASSVAADHRGGGYRAP 124
Query: 136 EC-LKNLRPNTKWDVYSFGMVLLELLSGR 163
E RP KWDV+SFG+VL+ELL+GR
Sbjct: 125 EARTAGARPAQKWDVFSFGVVLMELLTGR 153
>Os08g0200500 Protein kinase-like domain containing protein
Length = 369
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 79/176 (44%), Gaps = 53/176 (30%)
Query: 15 SPLQLSLEARLRIARGVARGLAFIHEK---KGVHGNVKPSNILLGADMEPWIGDFGLDRL 71
S +Q + AR++I GVARGLAF+HE+ +H ++K SNILL DM P I DFGL RL
Sbjct: 130 SNIQFNWRARVKITVGVARGLAFLHEEVRPHIIHRDIKASNILLDKDMTPKISDFGLARL 189
Query: 72 LSGEAVHRSTGASARLFGSKRSMHSTSSLPDLSQMXXXXXXXXXXXXXXXXXXXXXXXXX 131
L A H ST + +
Sbjct: 190 LPPNATHVSTRVAGTI-------------------------------------------G 206
Query: 132 YQAPECLKNLRPNTKWDVYSFGMVLLELLSGRVYSEVELCQWHAGFVVEERSRLLR 187
Y APE + K D+YSFG+++LE++SGR C +++ EE+ L R
Sbjct: 207 YLAPEYALRGQVTKKSDIYSFGVLILEIVSGR-------CNYNSRLPYEEQFLLER 255
>Os07g0541800 Similar to KI domain interacting kinase 1
Length = 663
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 45/149 (30%)
Query: 18 QLSLEARLRIARGVARGLAFIHE---KKGVHGNVKPSNILLGADMEPWIGDFGLDRLLSG 74
QL R RI G+ARGL ++H+ KK VH ++K SNILL ADM P IGDFGL RL
Sbjct: 447 QLDWTTRFRIIEGIARGLQYLHQDSQKKIVHRDMKASNILLDADMNPKIGDFGLARLFGQ 506
Query: 75 EAVHRSTGASARLFGSKRSMHSTSSLPDLSQMXXXXXXXXXXXXXXXXXXXXXXXXXYQA 134
+ T FG Y +
Sbjct: 507 DQTREITNRIVGTFG------------------------------------------YMS 524
Query: 135 PECLKNLRPNTKWDVYSFGMVLLELLSGR 163
PE + + + +TK DV+SFG++++E+++GR
Sbjct: 525 PEYVTHGQYSTKSDVFSFGILVIEIVTGR 553
>Os01g0642700
Length = 732
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 74/156 (47%), Gaps = 47/156 (30%)
Query: 11 FGASSPLQLSLEARLRIARGVARGLAFIHEKKG---VHGNVKPSNILLGADMEPWIGDFG 67
FG S+PL LS + R +IA G+A+GLA++HEK +H ++KP N+LLGAD P I DFG
Sbjct: 522 FG-STPLTLSWKTRYQIALGIAKGLAYLHEKCRSLIIHCDIKPENVLLGADFMPKIADFG 580
Query: 68 LDRLLSGEAVHRSTGASARLFGSKRSMHSTSSLPDLSQMXXXXXXXXXXXXXXXXXXXXX 127
L +LL + +R+ + R
Sbjct: 581 LAKLLGRDF--------SRVLTTMRG---------------------------------- 598
Query: 128 XXXXYQAPECLKNLRPNTKWDVYSFGMVLLELLSGR 163
Y APE + TK DV+S+GM+L E++SG
Sbjct: 599 -TIGYLAPEWISGTAITTKADVFSYGMMLFEIISGN 633
>Os07g0542300
Length = 660
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 45/149 (30%)
Query: 18 QLSLEARLRIARGVARGLAFIHE---KKGVHGNVKPSNILLGADMEPWIGDFGLDRLLSG 74
QL R +I G ARGL ++HE KK +H ++K SNILL ADM P IGDFGL +L +
Sbjct: 449 QLDWATRFKIIEGTARGLQYLHEDSQKKIIHRDMKASNILLDADMNPKIGDFGLAKLFAQ 508
Query: 75 EAVHRSTGASARLFGSKRSMHSTSSLPDLSQMXXXXXXXXXXXXXXXXXXXXXXXXXYQA 134
+ T A FG Y +
Sbjct: 509 DQTREVTSRIAGTFG------------------------------------------YIS 526
Query: 135 PECLKNLRPNTKWDVYSFGMVLLELLSGR 163
PE + + +TK DV+SFG++++E+++G+
Sbjct: 527 PEYVMCGQYSTKSDVFSFGILVIEIVTGQ 555
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.138 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,832,489
Number of extensions: 238287
Number of successful extensions: 3604
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 4152
Number of HSP's successfully gapped: 9
Length of query: 255
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 156
Effective length of database: 11,866,615
Effective search space: 1851191940
Effective search space used: 1851191940
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)