Os09g0110100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0110100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 327.15 | 0.85 | 4.45 | -2.98 | 1.87 | 1.13 | -2.71 | -8 | -0.546 | 21 | 999.5 | 4687 | -- | -- |
| 372.41 | 0.906 | 4.35 | -2.72 | 1.86 | 0.43 | -2.68 | -- | -0.544 | 21 | 1002 | 6408 | -- | -- |
| 352.3 | 0.874 | 4.45 | -2.89 | 1.87 | 1.1 | -- | -7.94 | -0.547 | 21 | 999.4 | 4689 | -- | -- |
| 373.44 | 0.9 | 4.37 | -2.45 | 1.86 | 2.29 | -- | -- | -0.523 | 20.9 | 991.6 | 3630 | -- | -- |
| 554.21 | 1.1 | 4.4 | -2.91 | -- | 1.12 | -- | -7.9 | -0.547 | -- | 999.6 | 4684 | -- | -- |
| 378.72 | 0.912 | 4.36 | -2.66 | 1.86 | -- | -2.68 | -- | -0.584 | 20.9 | -- | -- | -- | -- |
| 403.23 | 0.94 | 4.36 | -2.57 | 1.86 | -- | -- | -- | -0.583 | 21 | -- | -- | -- | -- |
| 574.03 | 1.12 | 4.3 | -2.42 | -- | 2.43 | -- | -- | -0.544 | -- | 993.2 | 5044 | -- | -- |
| 523.78 | 1.07 | 4.29 | -- | 1.88 | 3.29 | -- | -- | -0.251 | 20.9 | 991.6 | 8333 | -- | -- |
| 602.49 | 1.15 | 4.31 | -2.57 | -- | -- | -- | -- | -0.594 | -- | -- | -- | -- | -- |
| 577.04 | 1.12 | 4.3 | -- | 1.87 | -- | -- | -- | -0.297 | 20.9 | -- | -- | -- | -- |
| 700.97 | 1.23 | 4.23 | -- | -- | 2.78 | -- | -- | -0.232 | -- | 992.7 | 12893 | -- | -- |
| 776.09 | 1.3 | 4.25 | -- | -- | -- | -- | -- | -0.31 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 320.59 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 2 | 320.61 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 3 | 320.64 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 4 | 320.69 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 6 | 321.39 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 9 |
| 7 | 321.43 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 8 | 321.48 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 12 | 321.51 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 13 | 321.52 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 21 | 321.60 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 22 | 321.63 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 25 | 321.64 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 5 | 17 |
| 26 | 321.65 | atmosphere | 995 | 14400 | < th | dose independent | sin | 20 | NA |
| 43 | 321.72 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 13 |
| 46 | 321.75 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 47 | 321.76 | atmosphere | 995 | 14400 | > th | dose independent | sin | 20 | NA |
| 50 | 321.79 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 59 | 321.85 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 8 | 15 |
| 62 | 321.89 | atmosphere | 995 | 14400 | < th | dose independent | sin | 0 | NA |
| 74 | 322.03 | atmosphere | 995 | 14400 | > th | dose independent | sin | 0 | NA |
| 97 | 322.26 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 5 | 17 |
| 109 | 322.36 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 150 | 322.59 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 154 | 322.61 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 177 | 322.81 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 22 | NA |
| 266 | 323.42 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 14 | 9 |
| 295 | 323.48 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 306 | 323.56 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 491 | 324.17 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 19 |
| 494 | 324.17 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 507 | 324.18 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 21 |
| 514 | 324.19 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 21 |
| 516 | 324.19 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 517 | 324.19 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 535 | 324.21 | atmosphere | 995 | 14400 | > th | dose independent | no | NA | NA |
| 582 | 324.32 | atmosphere | 995 | 14400 | < th | dose independent | no | NA | NA |
| 624 | 324.33 | atmosphere | 1000 | 4320 | < th | dose independent | sin | 13 | NA |
| 630 | 324.34 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 720 | 324.62 | atmosphere | 1000 | 4320 | > th | dose independent | sin | 13 | NA |
| 811 | 324.84 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 905 | 324.98 | atmosphere | 995 | 14400 | < th | dose dependent | no | NA | NA |