Os07g0541800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to KI domain interacting kinase 1.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0541800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to KI domain interacting kinase 1.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 516.31 | 1.07 | 3.71 | -0.0397 | 1.36 | 2.01 | -1.9 | -1.74 | 0.341 | 3.05 | 23.53 | 1200 | 8.03 | 7.17 |
| 522.51 | 1.06 | 3.74 | -0.0805 | 1.38 | 2.04 | -1.91 | -- | 0.282 | 3.04 | 22.27 | 1200 | 8.02 | 7.31 |
| 527.13 | 1.07 | 3.72 | -0.0135 | 1.35 | 1.98 | -- | -1.73 | 0.337 | 2.67 | 21.3 | 1200 | 8.02 | 7.27 |
| 534.59 | 1.08 | 3.74 | -0.141 | 1.4 | 2 | -- | -- | 0.265 | 2.61 | 20 | 1200 | 8.02 | 7.25 |
| 535.56 | 1.08 | 3.71 | -0.154 | -- | 3.25 | -- | -3.45 | 0.296 | -- | 86.63 | 1200 | 8.01 | 14.7 |
| 627 | 1.17 | 3.86 | -0.611 | 1.43 | -- | -1.86 | -- | -0.195 | 2.17 | -- | -- | -- | -- |
| 639.56 | 1.18 | 3.85 | -0.556 | 1.42 | -- | -- | -- | -0.183 | 1.92 | -- | -- | -- | -- |
| 557.22 | 1.1 | 3.74 | -0.123 | -- | 3.09 | -- | -- | 0.282 | -- | 91.8 | 1198 | 8.08 | 14.5 |
| 535.13 | 1.08 | 3.74 | -- | 1.35 | 2.02 | -- | -- | 0.292 | 2.59 | 20 | 1200 | 8.02 | 7.26 |
| 761.74 | 1.29 | 3.84 | -0.497 | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
| 647.71 | 1.19 | 3.84 | -- | 1.41 | -- | -- | -- | -0.121 | 1.91 | -- | -- | -- | -- |
| 558.12 | 1.1 | 3.75 | -- | -- | 2.98 | -- | -- | 0.29 | -- | 95.96 | 1211 | 7.83 | 14.7 |
| 768.26 | 1.29 | 3.83 | -- | -- | -- | -- | -- | -0.0947 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 536.56 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 7 |
| 3 | 538.10 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 5 | 538.66 | wind | 1 | 90 | < th | dose independent | rect. | 23 | 5 |
| 13 | 539.96 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 29 | 540.25 | radiation | 20 | 1440 | < th | dose dependent | sin | 23 | NA |
| 32 | 540.29 | radiation | 20 | 1440 | < th | dose dependent | rect. | 8 | 20 |
| 34 | 540.32 | radiation | 20 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 52 | 540.66 | radiation | 30 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 59 | 540.77 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 72 | 541.67 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 98 | 541.99 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 5 |
| 100 | 542.00 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 14 |
| 108 | 542.05 | radiation | 10 | 720 | < th | dose independent | rect. | 14 | 13 |
| 110 | 542.05 | radiation | 20 | 1440 | < th | dose dependent | rect. | 23 | 17 |
| 122 | 542.14 | radiation | 10 | 1440 | > th | dose independent | sin | 2 | NA |
| 130 | 542.17 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 136 | 542.27 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 7 |
| 158 | 542.73 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 186 | 542.86 | radiation | 1 | 1440 | > th | dose dependent | rect. | 12 | 3 |
| 197 | 543.12 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 201 | 543.19 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 205 | 543.29 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 226 | 543.49 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 235 | 543.52 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 249 | 543.56 | radiation | 10 | 1440 | < th | dose independent | rect. | 10 | 7 |
| 261 | 543.59 | radiation | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 274 | 543.63 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 291 | 543.65 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 425 | 544.12 | radiation | 10 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 548 | 545.04 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 11 |
| 584 | 545.35 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 11 |
| 628 | 545.82 | humidity | 80 | 720 | > th | dose independent | rect. | 14 | 8 |
| 629 | 545.82 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 640 | 545.87 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 656 | 545.97 | radiation | 1 | 1440 | > th | dose dependent | rect. | 12 | 21 |
| 693 | 546.08 | humidity | 70 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 724 | 546.16 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 16 |
| 735 | 546.22 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 12 |
| 739 | 546.24 | radiation | 20 | 1440 | < th | dose dependent | rect. | 14 | 23 |
| 767 | 546.47 | radiation | 10 | 1440 | < th | dose independent | sin | 19 | NA |
| 817 | 547.03 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 829 | 547.16 | wind | 1 | 90 | < th | dose independent | rect. | 13 | 15 |
| 878 | 547.42 | wind | 1 | 90 | < th | dose independent | rect. | 15 | 13 |