BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0606800 Os06g0606800|AK066355
         (372 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0606800  Targeting for Xklp2 family protein                  687   0.0  
Os02g0200800  Targeting for Xklp2 family protein                  266   2e-71
Os11g0571900  Targeting for Xklp2 family protein                  125   4e-29
Os11g0592600  Targeting for Xklp2 family protein                  100   3e-21
Os03g0799100  Similar to WAVE-DAMPENED2                            87   3e-17

>Os06g0606800 Targeting for Xklp2 family protein
          Length = 372

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/372 (92%), Positives = 344/372 (92%)

Query: 1   MDEVAEIADAMGTVGIDNGASRKLLSNESLEERGEEHDVQADGAHSGESEVINPAEEVGG 60
           MDEVAEIADAMGTVGIDNGASRKLLSNESLEERGEEHDVQADGAHSGESEVINPAEEVGG
Sbjct: 1   MDEVAEIADAMGTVGIDNGASRKLLSNESLEERGEEHDVQADGAHSGESEVINPAEEVGG 60

Query: 61  EATSQPEDVKPRVSKGSQSHSPKVTTKSQRQSPRSGDKSQARKNSPGSTYPKAPIARVSD 120
           EATSQPEDVKPRVSKGSQSHSPKVTTKSQRQSPRSGDKSQARKNSPGSTYPKAPIARVSD
Sbjct: 61  EATSQPEDVKPRVSKGSQSHSPKVTTKSQRQSPRSGDKSQARKNSPGSTYPKAPIARVSD 120

Query: 121 PDLVDSSSCNDGADIKKAEKSSFRPVARASQSLEDSKEKKKTQKTSNQCSVKNDEEEPNC 180
           PDLVDSSSCNDGADIKKAEKSSFRPVARASQSLEDSKEKKKTQKTSNQCSVKNDEEEPNC
Sbjct: 121 PDLVDSSSCNDGADIKKAEKSSFRPVARASQSLEDSKEKKKTQKTSNQCSVKNDEEEPNC 180

Query: 181 EKVKPQRVGSTPAYGFAFKCDERAEKRREFYSKLEEKIHAQELEKSNMQAKSKETEEAEL 240
           EKVKPQRVGSTPAYGFAFKCDERAEKRREFYSKLEEKIHAQELEKSNMQAKSKETEEAEL
Sbjct: 181 EKVKPQRVGSTPAYGFAFKCDERAEKRREFYSKLEEKIHAQELEKSNMQAKSKETEEAEL 240

Query: 241 KKLRKSLNFRANPMPSFYXXXXXXXXXXXXXXTTRARSPKLGRSKNXXXXXXXXXXXXXX 300
           KKLRKSLNFRANPMPSFY              TTRARSPKLGRSKN              
Sbjct: 241 KKLRKSLNFRANPMPSFYKEPPPPKVELKKIPTTRARSPKLGRSKNTSSVSTEESTVPSS 300

Query: 301 RPARLSLDERASQNGVKKVPAANTVRKPQRKSLPKLPSEQTVTEQVENNTSATDPVRELI 360
           RPARLSLDERASQNGVKKVPAANTVRKPQRKSLPKLPSEQTVTEQVENNTSATDPVRELI
Sbjct: 301 RPARLSLDERASQNGVKKVPAANTVRKPQRKSLPKLPSEQTVTEQVENNTSATDPVRELI 360

Query: 361 RAQVTPDDQFGG 372
           RAQVTPDDQFGG
Sbjct: 361 RAQVTPDDQFGG 372



>Os02g0200800 Targeting for Xklp2 family protein
          Length = 334

 Score =  266 bits (681), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 157/277 (56%), Positives = 184/277 (66%), Gaps = 12/277 (4%)

Query: 70  KPRVSKGSQSHSPKVTTKSQRQSPRSGDKSQARKNSPGSTYPKAPIARVSDPDLVDSSSC 129
           KPR +K +QSH PKV    + +SP+SG + QAR+++P ST  KAP+ARVS  D    S  
Sbjct: 7   KPRPAKATQSHGPKVV---KSRSPKSGGEGQARRSTPSSTLSKAPVARVSHADSSTGSKI 63

Query: 130 N--DGADIKKAEKSSFRPVARASQSLEDSKEKKKTQKTSNQCSVKNDEEEPNCEKVKPQR 187
           N     D  KAEK   R   + + SLEDSKEK+KTQK   Q S    ++E N E    ++
Sbjct: 64  NGDSSVDRNKAEKQEPRSSTKET-SLEDSKEKRKTQKPLGQNSSVKKDDESNPES---RK 119

Query: 188 VGSTPAYGFAFKCDERAEKRREFYSKLEEKIHAQELEKSNMQAKSKETEEAELKKLRKSL 247
            G TPAYGF+FKCDERAEKR+EFYSKLEEKIHA+E+E SN+QAKSKETEEAELK LRKSL
Sbjct: 120 AGGTPAYGFSFKCDERAEKRKEFYSKLEEKIHAREMEISNLQAKSKETEEAELKMLRKSL 179

Query: 248 NFRANPMPSFYXXXXXXXXXXXXXXTTRARSPKLGRSKNXXXXXXXXXXXXXXRPARL-- 305
           NF+A PMPSFY               TRARSPKLGRSKN              RP RL  
Sbjct: 180 NFKATPMPSFYQEPTPPKVELKKIPPTRARSPKLGRSKNKSAGETEETVTPPGRPVRLSL 239

Query: 306 -SLDERASQNGVKKVPAANTVRKPQRKSLPKLPSEQT 341
            SLDE+ SQNGVKK   +N V+KPQRKSLPKLPSE+T
Sbjct: 240 DSLDEKVSQNGVKKANPSNAVKKPQRKSLPKLPSEET 276



>Os11g0571900 Targeting for Xklp2 family protein
          Length = 430

 Score =  125 bits (315), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/155 (46%), Positives = 96/155 (61%), Gaps = 4/155 (2%)

Query: 195 GFAFKCDERAEKRREFYSKLEEKIHAQELEKSNMQAKSKETEEAELKKLRKSLNFRANPM 254
           GF+F+  ERAEKR+EFY KLEEKIHA+ELE++N+QAKSKE++EAE+K LRKSL F+A PM
Sbjct: 207 GFSFRLQERAEKRKEFYQKLEEKIHAKELEQTNLQAKSKESQEAEIKLLRKSLTFKATPM 266

Query: 255 PSFYXXXXXXXXXXXXXXTTRARSPKLGRSK--NXXXXXXXXXXXXXXRPARLSLDERAS 312
           PSFY               TRARSPKLGR K  N               P  ++   + +
Sbjct: 267 PSFYKEQPPKVELKKIPP-TRARSPKLGRHKPTNSAAAASVDGSVSCESPRSITNLAKLT 325

Query: 313 QNGVKKVPAANTVRKPQRKSLPKLPSEQTVTEQVE 347
           ++     P A T RKP ++S+ K+PS+ + T + E
Sbjct: 326 ESTENNKPHA-TARKPAQRSVTKIPSQASATAKTE 359



>Os11g0592600 Targeting for Xklp2 family protein
          Length = 407

 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 62/99 (62%), Gaps = 1/99 (1%)

Query: 187 RVGSTPAYGFAFKCDERAEKRREFYSKLEEKIHAQELEKSNMQAKSKETEEAELKKLRKS 246
           R  + PA G  F+C ERAEKRREFY KLEEK  A E EK  ++AK K+ +E  LK LRKS
Sbjct: 233 RTTTVPA-GPVFRCTERAEKRREFYMKLEEKHQALEEEKIQLEAKLKKEQEEALKLLRKS 291

Query: 247 LNFRANPMPSFYXXXXXXXXXXXXXXTTRARSPKLGRSK 285
           L F+A PMPSFY              TTR +SPKLGR K
Sbjct: 292 LTFKATPMPSFYHEAPSPKAEYKKLPTTRPKSPKLGRRK 330



>Os03g0799100 Similar to WAVE-DAMPENED2
          Length = 359

 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/100 (50%), Positives = 60/100 (60%), Gaps = 3/100 (3%)

Query: 187 RVGSTPA-YGFA--FKCDERAEKRREFYSKLEEKIHAQELEKSNMQAKSKETEEAELKKL 243
           R G T A  G A  F C +RA+KR+EFY+KLEEK  A E EK+  +A+ KE +E  LK+L
Sbjct: 204 RAGKTKATVGVAPSFVCADRADKRKEFYTKLEEKHKALEAEKNEAEARKKEEQETALKQL 263

Query: 244 RKSLNFRANPMPSFYXXXXXXXXXXXXXXTTRARSPKLGR 283
           RKSL  RA PMPSFY               TRA+SPK  R
Sbjct: 264 RKSLVIRAKPMPSFYQEGPPPKAELKKVPPTRAKSPKFTR 303



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.303    0.121    0.326 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,556,288
Number of extensions: 474906
Number of successful extensions: 1787
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1779
Number of HSP's successfully gapped: 5
Length of query: 372
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 270
Effective length of database: 11,709,973
Effective search space: 3161692710
Effective search space used: 3161692710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 157 (65.1 bits)