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Os03g0799100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to WAVE-DAMPENED2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0159) R2 : 0.615
β1 : -1.01 (0.0584) R2dD : 0.262 R2D : 0.251
β2 : 0.852 (0.0413) R2dC : 0.362 R2C : 0.349
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0174 (0.034) R2dN8 : 0.000295 R2N8 : 0.0029
σ : 0.3
deviance : 40.99
__
_____
C
peak time of C : 4.84
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.32 0.275 12.3 -1.06 0.83 -0.416 0.149 -0.00659 -0.0804 5.13 18.34 1353 -- --
34.29 0.273 12.3 -1.06 0.83 -0.418 0.144 -- -0.0802 5.16 18.54 1340 -- --
34.34 0.273 12.3 -1.06 0.832 -0.421 -- -0.0135 -0.0828 5.19 18.54 1341 -- --
34.34 0.273 12.3 -1.06 0.832 -0.422 -- -- -0.0824 5.18 18.53 1341 -- --
70.35 0.391 12.3 -1.03 -- -0.48 -- -0.0859 -0.0955 -- 18.81 1364 -- --
40.83 0.3 12.2 -1.01 0.85 -- 0.255 -- 0.0186 4.81 -- -- -- --
40.99 0.3 12.2 -1.01 0.852 -- -- -- 0.0174 4.84 -- -- -- --
70.33 0.391 12.3 -1.02 -- -0.473 -- -- -0.0766 -- 18.75 1367 -- --
58.18 0.355 12.2 -- 0.867 -0.444 -- -- -0.0332 5.38 20 28651 -- --
79.37 0.416 12.2 -0.978 -- -- -- -- 0.0394 -- -- -- -- --
67.86 0.385 12.2 -- 0.834 -- -- -- 0.13 4.88 -- -- -- --
86.1 0.432 12.2 -- -- -0.767 -- -- 0.207 -- 57.18 21732 -- --
104.59 0.477 12.2 -- -- -- -- -- 0.148 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.55 humidity 70 720 > th dose independent rect. 19 8
2 31.59 humidity 80 720 < th dose dependent rect. 20 1
3 31.84 temperature 30 720 > th dose dependent rect. 18 1
18 32.08 humidity 90 720 < th dose dependent rect. 18 5
51 32.43 humidity 80 720 < th dose dependent rect. 18 14
52 32.44 humidity 70 720 < th dose independent rect. 19 1
70 32.57 wind 1 270 < th dose independent rect. 4 1
78 32.65 temperature 30 720 > th dose independent rect. 18 1
162 33.16 wind 1 270 < th dose dependent rect. 4 1
187 33.40 temperature 25 90 < th dose independent rect. 3 10
206 33.65 humidity 50 1440 < th dose independent rect. 16 1
207 33.66 humidity 70 720 > th dose dependent rect. 19 5
215 33.72 humidity 50 1440 < th dose dependent rect. 16 1
227 33.82 radiation 1 14400 > th dose independent rect. 18 11
256 33.96 radiation 1 14400 > th dose independent rect. 18 1
271 33.97 temperature 30 90 < th dose dependent rect. 3 10
275 34.03 temperature 20 10 > th dose dependent rect. 4 2
278 34.05 temperature 20 90 > th dose independent rect. 4 1
297 34.09 wind 5 43200 > th dose independent rect. 10 3
299 34.10 temperature 20 270 > th dose independent rect. 5 10
303 34.11 humidity 80 720 > th dose dependent rect. 21 2
318 34.12 wind 5 43200 < th dose independent rect. 10 3
328 34.16 temperature 30 1440 < th dose independent rect. 18 2
329 34.17 wind 3 43200 > th dose dependent rect. 10 1
332 34.19 temperature 30 1440 < th dose independent rect. 18 4
334 34.19 temperature 30 90 < th dose dependent rect. 3 12
340 34.22 wind 9 43200 < th dose independent rect. 12 1
342 34.23 wind 5 43200 < th dose independent rect. 24 14
352 34.25 temperature 20 90 > th dose dependent rect. 3 3
357 34.27 temperature 30 1440 < th dose independent rect. 18 6
358 34.27 wind 5 43200 > th dose independent rect. 24 14
364 34.30 wind 5 43200 < th dose independent rect. 8 6
371 34.32 wind 5 43200 > th dose independent rect. 8 6
378 34.33 wind 5 43200 < th dose independent rect. 4 10
381 34.33 temperature 20 90 > th dose dependent rect. 4 1
395 34.36 wind 1 90 < th dose independent rect. 1 4
398 34.36 wind 5 43200 > th dose independent rect. 4 10
399 34.36 wind 5 43200 > th dose independent rect. 2 12
401 34.36 wind 3 10 < th dose dependent rect. 4 2
418 34.39 temperature 25 90 < th dose independent rect. 17 10
435 34.44 humidity 70 720 > th dose independent rect. 18 15
443 34.46 radiation 30 14400 > th dose independent rect. 7 1
468 34.47 wind 5 43200 > th dose dependent rect. 24 14
469 34.48 wind 5 43200 < th dose independent sin 5 NA
470 34.48 humidity 50 1440 > th dose independent rect. 16 1
473 34.48 wind 3 43200 > th dose dependent rect. 8 4
479 34.50 wind 5 43200 > th dose independent sin 5 NA
519 34.53 wind 5 43200 > th dose dependent rect. 5 8
528 34.54 wind 9 43200 > th dose dependent rect. 12 1
529 34.54 radiation 40 1440 > th dose dependent rect. 13 20
558 34.57 temperature 25 90 < th dose independent rect. 19 8
584 34.60 temperature 10 270 > th dose dependent rect. 5 10
603 34.63 humidity 80 720 > th dose independent rect. 21 1
606 34.63 humidity 90 720 < th dose dependent sin 12 NA
618 34.64 radiation 40 1440 > th dose dependent rect. 13 3
657 34.65 wind 9 43200 < th dose dependent rect. 10 1
659 34.66 wind 9 43200 > th dose independent rect. 12 1
687 34.69 wind 5 43200 > th dose dependent sin 6 NA
698 34.70 humidity 90 90 > th dose dependent rect. 4 1
707 34.71 radiation 1 14400 < th dose independent rect. 18 11
736 34.74 radiation 20 1440 < th dose dependent rect. 11 22
751 34.76 radiation 1 720 > th dose independent rect. 18 1
772 34.77 humidity 80 1440 < th dose independent rect. 2 7
785 34.78 wind 1 43200 > th dose dependent rect. 2 2
799 34.79 wind 9 43200 > th dose dependent rect. 15 1
804 34.80 temperature 25 90 < th dose independent rect. 4 1
812 34.80 temperature 30 1440 < th dose independent rect. 18 14
821 34.81 temperature 30 1440 < th dose independent rect. 18 8
823 34.81 temperature 30 1440 < th dose independent rect. 18 11
834 34.81 radiation 20 1440 < th dose dependent rect. 24 17
847 34.82 radiation 20 1440 < th dose dependent rect. 5 12
868 34.84 humidity 80 1440 > th dose independent rect. 2 7
877 34.84 wind 7 43200 < th dose dependent rect. 2 2
879 34.84 radiation 20 1440 < th dose dependent rect. 15 23
883 34.85 humidity 80 1440 < th dose independent rect. 23 10
895 34.86 temperature 25 720 > th dose dependent sin 13 NA
916 34.87 wind 1 90 < th dose dependent rect. 4 6
922 34.87 humidity 50 720 > th dose dependent rect. 17 16
932 34.87 radiation 20 1440 < th dose dependent rect. 5 22
948 34.88 radiation 20 1440 < th dose dependent no NA NA
969 34.88 radiation 20 1440 < th dose dependent rect. 5 20
972 34.88 radiation 20 1440 < th dose dependent rect. 2 23