Os11g0571900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Targeting for Xklp2 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0571900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Targeting for Xklp2 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.9 | 0.384 | 8.52 | -1.05 | 0.786 | 1.39 | 0.388 | -4.08 | 0.14 | 5.69 | 24.46 | 1237 | -- | -- |
| 74.23 | 0.401 | 8.42 | -0.0295 | 0.774 | 1.09 | 0.171 | -- | 0.277 | 5.95 | 22.7 | 1171 | -- | -- |
| 67.24 | 0.382 | 8.52 | -1.04 | 0.787 | 1.39 | -- | -4 | 0.134 | 5.77 | 24.33 | 1233 | -- | -- |
| 73.67 | 0.4 | 8.39 | -0.00888 | 0.804 | 1.02 | -- | -- | 0.415 | 5.86 | 24.26 | 1178 | -- | -- |
| 98.65 | 0.463 | 8.54 | -1.05 | -- | 1.47 | -- | -3.87 | 0.117 | -- | 24.01 | 1265 | -- | -- |
| 106.86 | 0.485 | 8.36 | 0.332 | 0.877 | -- | 0.531 | -- | 0.56 | 4.91 | -- | -- | -- | -- |
| 107.58 | 0.486 | 8.36 | 0.33 | 0.882 | -- | -- | -- | 0.557 | 4.97 | -- | -- | -- | -- |
| 105.35 | 0.478 | 8.41 | 0.000285 | -- | 1.1 | -- | -- | 0.404 | -- | 24 | 1263 | -- | -- |
| 73.58 | 0.4 | 8.39 | -- | 0.806 | 1.04 | -- | -- | 0.413 | 5.86 | 24.85 | 1171 | -- | -- |
| 148.48 | 0.569 | 8.37 | 0.363 | -- | -- | -- | -- | 0.58 | -- | -- | -- | -- | -- |
| 110.46 | 0.492 | 8.37 | -- | 0.888 | -- | -- | -- | 0.52 | 4.95 | -- | -- | -- | -- |
| 105.34 | 0.478 | 8.41 | -- | -- | 1.1 | -- | -- | 0.403 | -- | 24 | 1263 | -- | -- |
| 151.95 | 0.575 | 8.38 | -- | -- | -- | -- | -- | 0.54 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 5 | 66.95 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 21 | 67.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 65 | 67.78 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 134 | 68.80 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 146 | 68.85 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 13 |
| 149 | 68.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 155 | 68.90 | wind | 5 | 43200 | > th | dose dependent | sin | 19 | NA |
| 230 | 69.30 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 15 |
| 239 | 69.33 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 255 | 69.38 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 285 | 69.50 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 287 | 69.51 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 288 | 69.51 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 345 | 69.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 365 | 69.60 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 416 | 69.71 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 20 |
| 419 | 69.74 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 20 |
| 451 | 69.82 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 523 | 69.94 | wind | 7 | 43200 | < th | dose independent | sin | 18 | NA |
| 536 | 69.96 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 566 | 70.02 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 592 | 70.07 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 603 | 70.09 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 17 |
| 653 | 70.18 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 13 |
| 683 | 70.22 | wind | 7 | 43200 | > th | dose independent | sin | 18 | NA |
| 731 | 70.28 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 17 |
| 803 | 70.35 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 826 | 70.38 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 872 | 70.44 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 913 | 70.50 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 924 | 70.51 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 934 | 70.53 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 940 | 70.54 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 990 | 70.61 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 23 |