BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0254300 Os06g0254300|AK101337
(157 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0254300 Caleosin related family protein 329 6e-91
Os06g0254700 Caleosin related family protein 147 4e-36
Os02g0734600 Similar to EFA27 for EF hand, abscisic acid, 27kD 139 9e-34
Os02g0734400 Caleosin related family protein 135 1e-32
Os04g0510900 Similar to Embryo-specific protein 1 (ATS1) 108 1e-24
Os04g0511200 EFA27 for EF hand, abscisic acid, 27kD 92 2e-19
Os02g0734500 91 5e-19
AK110656 73 7e-14
>Os06g0254300 Caleosin related family protein
Length = 157
Score = 329 bits (843), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 157/157 (100%), Positives = 157/157 (100%)
Query: 1 ICYLIYCTHKEIIDQILFPYSNVQKDAPLPHLSIYIKNIYKGMHGSDTGALDAKGRFVPA 60
ICYLIYCTHKEIIDQILFPYSNVQKDAPLPHLSIYIKNIYKGMHGSDTGALDAKGRFVPA
Sbjct: 1 ICYLIYCTHKEIIDQILFPYSNVQKDAPLPHLSIYIKNIYKGMHGSDTGALDAKGRFVPA 60
Query: 61 KFEEIFSKHAKNRPDALTSLEVKEMILANRDPDDPQSWAAPIQEWGLIYGLASDKNGYFH 120
KFEEIFSKHAKNRPDALTSLEVKEMILANRDPDDPQSWAAPIQEWGLIYGLASDKNGYFH
Sbjct: 61 KFEEIFSKHAKNRPDALTSLEVKEMILANRDPDDPQSWAAPIQEWGLIYGLASDKNGYFH 120
Query: 121 KDSVRGIYDGSVFVKLEEERASSQSTVCRSLSFRSTV 157
KDSVRGIYDGSVFVKLEEERASSQSTVCRSLSFRSTV
Sbjct: 121 KDSVRGIYDGSVFVKLEEERASSQSTVCRSLSFRSTV 157
>Os06g0254700 Caleosin related family protein
Length = 215
Score = 147 bits (370), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 85/113 (75%)
Query: 32 LSIYIKNIYKGMHGSDTGALDAKGRFVPAKFEEIFSKHAKNRPDALTSLEVKEMILANRD 91
L IY+KNI+KG HGSD+G DA GRFVP KFEEIF KHA RPDALT E+KE++ +NR+
Sbjct: 101 LPIYVKNIHKGKHGSDSGVYDANGRFVPEKFEEIFKKHAHTRPDALTDKELKELLQSNRE 160
Query: 92 PDDPQSWAAPIQEWGLIYGLASDKNGYFHKDSVRGIYDGSVFVKLEEERASSQ 144
P D + W EW ++Y L DK+G+ HKD+VR +YDGS+F K+E+E+ S++
Sbjct: 161 PKDFKGWLGGFTEWKVLYYLCKDKDGFLHKDTVRAVYDGSLFAKMEQEKQSAK 213
>Os02g0734600 Similar to EFA27 for EF hand, abscisic acid, 27kD
Length = 373
Score = 139 bits (350), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
Query: 12 IIDQILFPYSNVQKDAPLPHLSIYIKNIYKGMHGSDTGALDAKGRFVPAKFEEIFSKHAK 71
I+ +L P + + P LSIYI+NIYKG+HGSD+ A D++GRFV KFEEIF+KHAK
Sbjct: 239 FINGVLSPKTR-PDNGTAPRLSIYIENIYKGIHGSDSSAYDSEGRFVAEKFEEIFAKHAK 297
Query: 72 NRPDALTSLEVKEMILANRDPDDPQSWAAPIQEWGLIYGLASDKNGYFHKDSVRGIYDGS 131
PDALTS E+ E++ ANR P D W A EW ++Y + DK+G K++VR +YDGS
Sbjct: 298 TVPDALTSDEIDELLQANRKPGDYTGWVAASSEWKILYKIGKDKDGLLRKEAVREVYDGS 357
Query: 132 VFVKLEEER 140
+F KL R
Sbjct: 358 LFTKLAAAR 366
>Os02g0734400 Caleosin related family protein
Length = 173
Score = 135 bits (339), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 82/118 (69%)
Query: 23 VQKDAPLPHLSIYIKNIYKGMHGSDTGALDAKGRFVPAKFEEIFSKHAKNRPDALTSLEV 82
Q++A SIYI+NI+KG+HGSDTGA D++GRFV KF+EIF+KHAK PD LT+ E+
Sbjct: 48 TQENATASRFSIYIENIHKGVHGSDTGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTAAEL 107
Query: 83 KEMILANRDPDDPQSWAAPIQEWGLIYGLASDKNGYFHKDSVRGIYDGSVFVKLEEER 140
EM+ ANR+P D + W EW + L DK+G+ KD+VR +YDGS F K+ ++
Sbjct: 108 DEMLRANREPKDYKGWVGASTEWETTFKLGKDKDGFLRKDTVRTVYDGSFFSKVASKK 165
>Os04g0510900 Similar to Embryo-specific protein 1 (ATS1)
Length = 310
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Query: 12 IIDQILFPYSNVQKDAPLPHLSIYIKNIYKGMHGSDTGALDAKGRFVPAKFEEIFSKHAK 71
++ + Y + P P IYI NI++ HGSD+G D +GRF+P FE IFSK+A+
Sbjct: 175 LVVNVSMSYPTLPGWLPSPFFPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYAR 234
Query: 72 NRPDALTSLEVKEMILANRDPDDPQSWAAPIQEWGLIYGLASDKNGYFHKDSVRGIYDGS 131
PD LT EV +M NR+ D W A EW ++Y LA D+ GY ++++R +YDGS
Sbjct: 235 TSPDRLTYREVWQMTEGNREVLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGS 294
Query: 132 VF--VKLEEERASSQS 145
+F V ++ E+ + S
Sbjct: 295 LFEYVAMQREQHAKMS 310
>Os04g0511200 EFA27 for EF hand, abscisic acid, 27kD
Length = 244
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 4 LIYCTHKEIIDQILFPYSNVQKDAPLPHLSIYIKNIYKGMHGSDTGALDAKGRFVPAKFE 63
L Y T I +LFP I+IKNI++ HGSD+ D +GRF+P FE
Sbjct: 114 LSYPTLPSWIPSLLFP--------------IHIKNIHRAKHGSDSSTYDNEGRFMPVNFE 159
Query: 64 EIFSKHAKNRPDALTSLEVKEMILANRDPDDPQSWAAPIQEWGLIYGLASDKNGYFHKDS 123
IFSK+A+ PD LT ++ M R D A EW L+Y LA D+ G+ K++
Sbjct: 160 SIFSKNARTAPDKLTFGDIWRMTEGQRVALDLLGRIASKGEWILLYVLAKDEEGFLRKEA 219
Query: 124 VRGIYDGSVFVKLEEER 140
VR +DGS+F + ++R
Sbjct: 220 VRRCFDGSLFESIAQQR 236
>Os02g0734500
Length = 182
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 65/118 (55%), Gaps = 15/118 (12%)
Query: 25 KDAPLPHLSIYIKNIYKGMHGSDTGALDAKGRFVPAKFEEIFSKHAKNRPDALTSLEVKE 84
+DA SIY++NI+KG+HGSDTGA D++GR HAK PD LTS E+ E
Sbjct: 74 EDADGSWFSIYVQNIHKGIHGSDTGAFDSEGR------------HAKTVPDGLTSDELDE 121
Query: 85 MILANRD---PDDPQSWAAPIQEWGLIYGLASDKNGYFHKDSVRGIYDGSVFVKLEEE 139
M+ A D D W EW + A DK+ KD+VR +YDGS F KL +E
Sbjct: 122 MLHAYADHTEHKDSSGWLQAATEWRATFEAAKDKDDILRKDTVRAVYDGSFFSKLAKE 179
>AK110656
Length = 162
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 28 PLPHLSIYIKNIYKGMHGSDTGALDAKGRF----VPAKFEEIFSKHAKNRPDALTSLEVK 83
P P++ IY+ N+++ HGSDT + D +G+F + A+ E S++ K DAL+ +V
Sbjct: 27 PDPYMRIYVANMHRSKHGSDTESFDRRGQFRQSQLEAELSECSSRYGK---DALSYGDVL 83
Query: 84 EMILANRDPDDPQSWAAPIQEWGLIYGLASDKNGYFHKDSVRGIYDGSVFVKL 136
M RD D A + EW Y L +GY KD + G+YDGS+FV L
Sbjct: 84 AMFRERRDVFDLFGMTAFLLEWSATYMLIWPADGYMRKDDILGVYDGSLFVVL 136
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,524,762
Number of extensions: 226246
Number of successful extensions: 416
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 413
Number of HSP's successfully gapped: 8
Length of query: 157
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 65
Effective length of database: 12,232,113
Effective search space: 795087345
Effective search space used: 795087345
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 152 (63.2 bits)