BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0165800 Os06g0165800|AK065744
(260 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0165800 Similar to Caffeoyl-CoA 3-O-methyltransferase ... 509 e-145
Os08g0498600 Similar to Caffeoyl-CoA 3-O-methyltransferase ... 288 3e-78
Os09g0481400 Similar to Caffeoyl-CoA O-methyltransferase (E... 285 3e-77
Os08g0498100 Similar to Caffeoyl-CoA O-methyltransferase 2 ... 281 3e-76
Os08g0498400 Similar to Caffeoyl-CoA 3-O-methyltransferase ... 275 3e-74
Os08g0154000 O-methyltransferase, family 3 protein 169 2e-42
>Os06g0165800 Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment)
Length = 260
Score = 509 bits (1311), Expect = e-145, Method: Compositional matrix adjust.
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 17 NGSSGGEQKTRHSEVGHKSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNLMTT 76
NGSSGGEQKTRHSEVGHKSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNLMTT
Sbjct: 17 NGSSGGEQKTRHSEVGHKSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNLMTT 76
Query: 77 SADEGQFLNLLLKLIGAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPS 136
SADEGQFLNLLLKLIGAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPS
Sbjct: 77 SADEGQFLNLLLKLIGAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPS 136
Query: 137 IEKAGVAHKIDFREGPALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVG 196
IEKAGVAHKIDFREGPALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVG
Sbjct: 137 IEKAGVAHKIDFREGPALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVG 196
Query: 197 GLVGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLC 256
GLVGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLC
Sbjct: 197 GLVGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLC 256
Query: 257 RRVK 260
RRVK
Sbjct: 257 RRVK 260
>Os08g0498600 Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment)
Length = 234
Score = 288 bits (737), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 134/230 (58%), Positives = 175/230 (76%), Gaps = 3/230 (1%)
Query: 32 GHKSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNLMTTSADEGQFLNLLLKLI 91
G +LLKSD + +Y+L+T+VYPREHE ++ELR +T NHP + M +S D+ QF ++LLK+I
Sbjct: 7 GSNTLLKSDSILEYVLDTTVYPREHERLRELRLITQNHPKSFMGSSPDQMQFFSVLLKMI 66
Query: 92 GAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPSIEKAGVAHKIDFREG 151
GA+ +E+GV+TGYSLLATALA+PDDG ++A+D++RE YELG P IE AGVAHK+DFR G
Sbjct: 67 GARNAVEVGVFTGYSLLATALALPDDGKVVAIDVSREYYELGRPVIEDAGVAHKVDFRHG 126
Query: 152 PALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLVGYDNTLWNGSVV 211
L VLDQL+ G G FDF + DADK+ Y YHERL++L++VGG+V YDNTLW GSV
Sbjct: 127 DGLAVLDQLL--AGGEGKFDFAYADADKEQYRGYHERLVRLLRVGGVVAYDNTLWGGSVA 184
Query: 212 LPADAP-MRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLCRRVK 260
+P D P Y R RD+++ N +AAD RVE C LPV DG+TLCRR+K
Sbjct: 185 MPRDTPGSSAYDRVVRDYMVGFNAMVAADDRVEACLLPVADGVTLCRRLK 234
>Os09g0481400 Similar to Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)
(Trans-caffeoyl-CoA 3- O-methyltransferase) (CCoAMT)
(CCoAOMT)
Length = 258
Score = 285 bits (728), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/231 (59%), Positives = 174/231 (75%), Gaps = 5/231 (2%)
Query: 34 KSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNLMTTSADEGQFLNLLLKLIGA 93
K+LLKS+ LYQY+LE++V+PRE +C++ELR TANHP +M S D+ Q LL++LI A
Sbjct: 27 KTLLKSEPLYQYVLESTVFPREPDCLRELRLATANHPMAVMAASPDQVQLFGLLIELISA 86
Query: 94 KKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENY-ELGLPSIEKAGVAHKIDFREGP 152
K +E+GV+TGYSLLATALA+PDDG I+A+D++RE+Y E+G P I+KAGVAHK+DFR G
Sbjct: 87 KNAIEVGVFTGYSLLATALALPDDGKIVAIDVSRESYDEVGAPVIDKAGVAHKVDFRVGL 146
Query: 153 ALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLVGYDNTLWNGSVVL 212
A+PVLD+LV EEGN G FDF FVDADK N+L YHERL++LV+VGGL+ YDNTLW GSV
Sbjct: 147 AMPVLDELVAEEGNKGRFDFAFVDADKVNFLGYHERLLQLVRVGGLIAYDNTLWGGSVAA 206
Query: 213 PA----DAPMRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLCRRV 259
P +A R E N A+AAD RV+ CQL + DG+ LCRRV
Sbjct: 207 PPAAADEAVPSGRDRSLAALAREFNAAIAADRRVKPCQLAIADGVMLCRRV 257
>Os08g0498100 Similar to Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104)
(Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2)
(CCoAOMT-2)
Length = 252
Score = 281 bits (719), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 133/240 (55%), Positives = 181/240 (75%), Gaps = 5/240 (2%)
Query: 25 KTRHSEVG--HKSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNLMTTSADEGQ 82
K HS++ +K+LLKSD LY+Y+L+T+V PRE ECM++LR +T H W M +SADE Q
Sbjct: 12 KNAHSDIDSTNKTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQWGFMQSSADEAQ 71
Query: 83 FLNLLLKLIGAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPSIEKAGV 142
L +LLK+ GAK+T+E+GV+TGYSLLATALA+P+DG ++A+D +RE+YE+G P +EKAGV
Sbjct: 72 LLGMLLKMAGAKRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGV 131
Query: 143 AHKIDFREGPALPVLDQLV---EEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLV 199
AHK+DFREG L LD+L+ G +FDF FVDADK NY+ YHE+L++LV+VGG +
Sbjct: 132 AHKVDFREGKGLEKLDELLAEEAAAGREAAFDFAFVDADKPNYVKYHEQLLQLVRVGGHI 191
Query: 200 GYDNTLWNGSVVLPADAPMRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLCRRV 259
YDNTLW G+V LP D P+ R + + +LN LAAD R+++CQL + DGIT+CRR+
Sbjct: 192 VYDNTLWAGTVALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRRL 251
>Os08g0498400 Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment)
Length = 292
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/250 (55%), Positives = 185/250 (74%), Gaps = 7/250 (2%)
Query: 17 NGSSGG------EQKTR-HSEVGHKSLLKSDDLYQYILETSVYPREHECMKELREVTANH 69
+G++GG E KT HS K+LLKS+ L++Y+L T VYPRE+E M+ELR +T+ H
Sbjct: 42 HGANGGIQIQSKEMKTAIHSNDSPKTLLKSESLHEYMLNTMVYPRENEFMRELRLITSEH 101
Query: 70 PWNLMTTSADEGQFLNLLLKLIGAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINREN 129
+ M++ +EGQ L+LLL L GAK T+E+GV+TG S+LATALAIPDDG ++A+D++RE
Sbjct: 102 TYGFMSSPPEEGQLLSLLLNLTGAKNTIEVGVFTGCSVLATALAIPDDGKVVAIDVSREY 161
Query: 130 YELGLPSIEKAGVAHKIDFREGPALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERL 189
++LGLP I+KAGVAHK+DFREG A+P+LD L+ E N G FDF FVDADK NY YHERL
Sbjct: 162 FDLGLPVIKKAGVAHKVDFREGAAMPILDNLLANEENEGKFDFAFVDADKGNYGEYHERL 221
Query: 190 MKLVKVGGLVGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLELNKALAADHRVEICQLPV 249
++LV+ GG++ YDNTLW GSV L D+ + ++ + R ++ N +A D RVE QLPV
Sbjct: 222 LRLVRAGGVLAYDNTLWGGSVALEDDSVLEEFDQDIRRSIVAFNAKIAGDPRVEAVQLPV 281
Query: 250 GDGITLCRRV 259
DGITLCRR+
Sbjct: 282 SDGITLCRRL 291
>Os08g0154000 O-methyltransferase, family 3 protein
Length = 302
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 138/228 (60%), Gaps = 10/228 (4%)
Query: 32 GHKSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNLMTTSADEGQFLNLLLKLI 91
G K L + LY+Y+L REH +KELRE TA + M S + Q L +L +++
Sbjct: 82 GRKQLGATTQLYEYLLANV---REHPVLKELREETAAMRGSQMQVSPAQAQLLAMLAQIL 138
Query: 92 GAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPSIEKAGVAHKIDFREG 151
GA++ +E+GVYTGYS LA ALA+P+ G ++A + + E+ +++GVAHK+D +
Sbjct: 139 GAQRCIEVGVYTGYSSLAVALALPESGRLVACERDERCLEVAKKYYQRSGVAHKVDVKHA 198
Query: 152 PALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLVGYDNTLWNGSVV 211
A L L+ + G S+DF FVDADK Y Y+E L+KLV+VGGL+ DN LW G V
Sbjct: 199 LAADSLKLLI-DGGEVNSYDFAFVDADKRMYEEYYELLLKLVRVGGLIVIDNVLWYGRVA 257
Query: 212 LPADAPMRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLCRRV 259
P RK I R+F NK L D+RV I +P+GDG+T+CR++
Sbjct: 258 DPL-VNDRKTIS-IRNF----NKKLLEDNRVSISMVPIGDGMTICRKL 299
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.138 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,593,527
Number of extensions: 355347
Number of successful extensions: 692
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 685
Number of HSP's successfully gapped: 6
Length of query: 260
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 161
Effective length of database: 11,866,615
Effective search space: 1910525015
Effective search space used: 1910525015
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 155 (64.3 bits)