BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0142300 Os06g0142300|J075065D24
         (115 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0142300  Early nodulin 93 ENOD93 protein family protein      182   4e-47
Os06g0141700  Similar to Early nodulin                            177   2e-45
Os06g0142200  Early nodulin                                       174   2e-44
Os06g0142400  Early nodulin                                       172   6e-44
Os06g0141600  Early nodulin 93 ENOD93 protein family protein      144   1e-35

>Os06g0142300 Early nodulin 93 ENOD93 protein family protein
          Length = 115

 Score =  182 bits (463), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 91/115 (79%), Positives = 91/115 (79%)

Query: 1   MSTVTRAYLDQKLALAKRCSREXXXXXXXXXXXXXXXXXXXXXXXXRMLPWAKANINPTG 60
           MSTVTRAYLDQKLALAKRCSRE                        RMLPWAKANINPTG
Sbjct: 1   MSTVTRAYLDQKLALAKRCSREATLAGAKAAAVATVASAVPTLASVRMLPWAKANINPTG 60

Query: 61  QALIICTAAGMAYFVAADKKILSLARKHSFEGAPEHLKNTSFQGTGRPHPAFFRP 115
           QALIICTAAGMAYFVAADKKILSLARKHSFEGAPEHLKNTSFQGTGRPHPAFFRP
Sbjct: 61  QALIICTAAGMAYFVAADKKILSLARKHSFEGAPEHLKNTSFQGTGRPHPAFFRP 115



>Os06g0141700 Similar to Early nodulin
          Length = 115

 Score =  177 bits (448), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/115 (76%), Positives = 89/115 (77%)

Query: 1   MSTVTRAYLDQKLALAKRCSREXXXXXXXXXXXXXXXXXXXXXXXXRMLPWAKANINPTG 60
           MSTVTRAYLDQKLALAKRCSRE                        RMLPWAKANINPTG
Sbjct: 1   MSTVTRAYLDQKLALAKRCSREATLAGAKAAAVATVASAVPTLASVRMLPWAKANINPTG 60

Query: 61  QALIICTAAGMAYFVAADKKILSLARKHSFEGAPEHLKNTSFQGTGRPHPAFFRP 115
           QALIICTAAGMAYFVAADKKILSLAR+HSFE APEHLKNTSFQGTG PHPAFFRP
Sbjct: 61  QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGTGHPHPAFFRP 115



>Os06g0142200 Early nodulin
          Length = 115

 Score =  174 bits (440), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 85/115 (73%), Positives = 90/115 (78%)

Query: 1   MSTVTRAYLDQKLALAKRCSREXXXXXXXXXXXXXXXXXXXXXXXXRMLPWAKANINPTG 60
           M+TVTRA+L+Q+LALAKRCSRE                        RMLPWAKANINPTG
Sbjct: 1   MATVTRAHLEQRLALAKRCSREANIAGVKAAAVATIASAVPTLASVRMLPWAKANINPTG 60

Query: 61  QALIICTAAGMAYFVAADKKILSLARKHSFEGAPEHLKNTSFQGTGRPHPAFFRP 115
           QALIICTAAGMAYFVAADKKILSLAR+HSFE APEHLKNTSFQGTGRPHPAFFRP
Sbjct: 61  QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGTGRPHPAFFRP 115



>Os06g0142400 Early nodulin
          Length = 115

 Score =  172 bits (435), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 84/115 (73%), Positives = 89/115 (77%)

Query: 1   MSTVTRAYLDQKLALAKRCSREXXXXXXXXXXXXXXXXXXXXXXXXRMLPWAKANINPTG 60
           M+TVTRA+L+Q+LALAKRCSRE                        RMLPWAKANINPTG
Sbjct: 1   MATVTRAHLEQRLALAKRCSREANIAGVKAAAVATIASAVPTLASVRMLPWAKANINPTG 60

Query: 61  QALIICTAAGMAYFVAADKKILSLARKHSFEGAPEHLKNTSFQGTGRPHPAFFRP 115
           QALIICTAAGMAYFVAADKKILSLAR+HSFE APEHLKNTSFQG GRPHPAFFRP
Sbjct: 61  QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGAGRPHPAFFRP 115



>Os06g0141600 Early nodulin 93 ENOD93 protein family protein
          Length = 139

 Score =  144 bits (364), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 66/69 (95%), Positives = 68/69 (98%)

Query: 47  RMLPWAKANINPTGQALIICTAAGMAYFVAADKKILSLARKHSFEGAPEHLKNTSFQGTG 106
           RM+PWAKANINPTGQALIICTAAGMAYFVAADKKILSLAR+HSFE APEHLKNTSFQGTG
Sbjct: 71  RMVPWAKANINPTGQALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGTG 130

Query: 107 RPHPAFFRP 115
           RPHPAFFRP
Sbjct: 131 RPHPAFFRP 139



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.132    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,026,213
Number of extensions: 90617
Number of successful extensions: 219
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 215
Number of HSP's successfully gapped: 5
Length of query: 115
Length of database: 17,035,801
Length adjustment: 82
Effective length of query: 33
Effective length of database: 12,754,253
Effective search space: 420890349
Effective search space used: 420890349
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 149 (62.0 bits)