BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0593900 Os05g0593900|AK058553
(474 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0593900 Similar to C13 endopeptidase NP1 precursor 908 0.0
Os01g0559600 Similar to C13 endopeptidase NP1 precursor 552 e-157
Os06g0105100 510 e-144
Os04g0537900 Similar to C13 endopeptidase NP1 (Fragment) 460 e-129
Os02g0644000 Similar to C13 endopeptidase NP1 (Fragment) 455 e-128
Os02g0219400 Similar to Yarrowia lipolytica chromosome F of... 103 2e-22
>Os05g0593900 Similar to C13 endopeptidase NP1 precursor
Length = 474
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/436 (100%), Positives = 436/436 (100%)
Query: 23 RWRWQEEFLRLPSSDETTRWAVLIAGSNGFYNYRHQADVCHAYQIMRKGGVEEQNIVVMM 82
RWRWQEEFLRLPSSDETTRWAVLIAGSNGFYNYRHQADVCHAYQIMRKGGVEEQNIVVMM
Sbjct: 23 RWRWQEEFLRLPSSDETTRWAVLIAGSNGFYNYRHQADVCHAYQIMRKGGVEEQNIVVMM 82
Query: 83 YDDIAHNPDNPRPGLIFNHPSGPDVYAGVPKDYTGDDVNVNNFLAVLLGNRSALTGSGSG 142
YDDIAHNPDNPRPGLIFNHPSGPDVYAGVPKDYTGDDVNVNNFLAVLLGNRSALTGSGSG
Sbjct: 83 YDDIAHNPDNPRPGLIFNHPSGPDVYAGVPKDYTGDDVNVNNFLAVLLGNRSALTGSGSG 142
Query: 143 KVVASGPNDHVFVYYADHGGPGVLSMPADGEYLYADDLVKALKKKHAGGGYKSLVVYVEA 202
KVVASGPNDHVFVYYADHGGPGVLSMPADGEYLYADDLVKALKKKHAGGGYKSLVVYVEA
Sbjct: 143 KVVASGPNDHVFVYYADHGGPGVLSMPADGEYLYADDLVKALKKKHAGGGYKSLVVYVEA 202
Query: 203 CESGSIFEGLLPSDISVYATTASNAEESSWGTYCPGDDHDAPAAEFDTCLGDLYSVAWME 262
CESGSIFEGLLPSDISVYATTASNAEESSWGTYCPGDDHDAPAAEFDTCLGDLYSVAWME
Sbjct: 203 CESGSIFEGLLPSDISVYATTASNAEESSWGTYCPGDDHDAPAAEFDTCLGDLYSVAWME 262
Query: 263 DAEAHQEGRLAETLRQQYRTVKNRTSDEGTYTLGSHVMQYGDMALAPQSLDLYYMDTSPA 322
DAEAHQEGRLAETLRQQYRTVKNRTSDEGTYTLGSHVMQYGDMALAPQSLDLYYMDTSPA
Sbjct: 263 DAEAHQEGRLAETLRQQYRTVKNRTSDEGTYTLGSHVMQYGDMALAPQSLDLYYMDTSPA 322
Query: 323 TANDHKLAAAGAKGSHSYTVSVNQRDADLLYLWRKYRRAGEGTAEKVEARERLVQEMGRR 382
TANDHKLAAAGAKGSHSYTVSVNQRDADLLYLWRKYRRAGEGTAEKVEARERLVQEMGRR
Sbjct: 323 TANDHKLAAAGAKGSHSYTVSVNQRDADLLYLWRKYRRAGEGTAEKVEARERLVQEMGRR 382
Query: 383 SRVDRSVEMIGGLLLGGAKHKQQVVRERAALVEDWECLRSMVRTFEDQCGSLGQYGIKHM 442
SRVDRSVEMIGGLLLGGAKHKQQVVRERAALVEDWECLRSMVRTFEDQCGSLGQYGIKHM
Sbjct: 383 SRVDRSVEMIGGLLLGGAKHKQQVVRERAALVEDWECLRSMVRTFEDQCGSLGQYGIKHM 442
Query: 443 RSFANICNAGVPHHAM 458
RSFANICNAGVPHHAM
Sbjct: 443 RSFANICNAGVPHHAM 458
>Os01g0559600 Similar to C13 endopeptidase NP1 precursor
Length = 501
Score = 552 bits (1423), Expect = e-157, Method: Compositional matrix adjust.
Identities = 281/461 (60%), Positives = 339/461 (73%), Gaps = 39/461 (8%)
Query: 23 RWRWQEE--FLRLPSS---------------DETTRWAVLIAGSNGFYNYRHQADVCHAY 65
R RW+EE LRLPS E TRWAVLIAGSNG+YNYRHQADVCHAY
Sbjct: 30 RPRWEEEGSNLRLPSERAVAAGAAADDAAEAAEGTRWAVLIAGSNGYYNYRHQADVCHAY 89
Query: 66 QIMRKGGVEEQNIVVMMYDDIAHNPDNPRPGLIFNHPSGPDVYAGVPKDYTGDDVNVNNF 125
QIM++GG++++NI+V MYDDIAHNP+NPRPG+I NHP G DVYAGVPKDYTG +VNV N
Sbjct: 90 QIMKRGGLKDENIIVFMYDDIAHNPENPRPGVIINHPQGGDVYAGVPKDYTGKEVNVKNL 149
Query: 126 LAVLLGNRSALTGSGSGKVVASGPNDHVFVYYADHGGPGVLSMPADGEYLYADDLVKALK 185
AVLLGN++A+ G GSGKV+ SGPNDH+F++Y+DHGGPGVL MP YLY DDLV LK
Sbjct: 150 FAVLLGNKTAVKG-GSGKVLDSGPNDHIFIFYSDHGGPGVLGMPTY-PYLYGDDLVDVLK 207
Query: 186 KKHAGGGYKSLVVYVEACESGSIFEGLLPSDISVYATTASNAEESSWGTYCPGDDHDAPA 245
KKHA G YKSLV Y+EACESGSIFEGLLP+ I+VYATTASNA+ESSWGTYCPG ++ +P
Sbjct: 208 KKHAAGTYKSLVFYLEACESGSIFEGLLPNGINVYATTASNADESSWGTYCPG-EYPSPP 266
Query: 246 AEFDTCLGDLYSVAWMEDAEAHQEGRLAETLRQQYRTVKNRTSDEGTYTLGSHVMQYGDM 305
E+DTCLGDLYSVAWMED++ H E+L+QQY VK RTS + TY GSHVM+YG +
Sbjct: 267 PEYDTCLGDLYSVAWMEDSDVHN--LRTESLKQQYNLVKERTSVQHTYYSGSHVMEYGSL 324
Query: 306 ALAPQSLDLYYMDTSPATAN-----DHKLAAAGAKGSHSYTVSVNQRDADLLYLWRKYRR 360
L + YM ++PA N D+ L S++ +VNQRDADL+Y W+KYR+
Sbjct: 325 ELNAHHV-FMYMGSNPANDNATFVEDNSLP--------SFSRAVNQRDADLVYFWQKYRK 375
Query: 361 AGEGTAEKVEARERLVQEMGRRSRVDRSVEMIGGLLLGGAKHKQQVVRERAA---LVEDW 417
E + EK EAR++L++ M RS VD SVE+IG LL G + + + RA LV+DW
Sbjct: 376 LPESSPEKNEARKQLLEMMAHRSHVDNSVELIGNLLFGSEEGPRVLKAVRATGEPLVDDW 435
Query: 418 ECLRSMVRTFEDQCGSLGQYGIKHMRSFANICNAGVPHHAM 458
CL+SMVRTFE QCGSL QYG+KHMRSFANICNAG+ AM
Sbjct: 436 SCLKSMVRTFEAQCGSLAQYGMKHMRSFANICNAGISAEAM 476
>Os06g0105100
Length = 452
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/437 (59%), Positives = 325/437 (74%), Gaps = 31/437 (7%)
Query: 26 WQEEFLRLPSSDETTRWAVLIAGSNGFYNYRHQADVCHAYQIMRKGGVEEQNIVVMMYDD 85
WQE FLRLP+ + T+WA+LIAGS G+ NYRHQADVCHAYQIM+KGG+++QNIVVMMYDD
Sbjct: 27 WQE-FLRLPTENGGTKWALLIAGSKGYENYRHQADVCHAYQIMKKGGLKDQNIVVMMYDD 85
Query: 86 IAHNPDNPRPGLIFNHPSGPDVYAGVPKDYTGDDVNVNNFLAVLLGNRSALTGSGSGKVV 145
IA+NP+NP G+I N P+GP+VYAGVPKDY G+DVN NNFLAVLLG +SALTG+GSGKV+
Sbjct: 86 IAYNPENPHKGVIINKPNGPNVYAGVPKDYNGNDVNKNNFLAVLLGKKSALTGAGSGKVI 145
Query: 146 ASGPNDHVFVYYADHGGPGVLSMPADGEYLYADDLVKALKKKHAGGGYKSLVVYVEACES 205
+SGPNDH+FVYY+DHG PG + MP+ G L+A+DL +ALK K+A G YK+LVVYVEACES
Sbjct: 146 SSGPNDHIFVYYSDHGSPGYVCMPSGGN-LHANDLSQALKNKNAAGAYKNLVVYVEACES 204
Query: 206 GSIFEG-LLPSDISVYATTASNAEESSWGTYCPGDDHDAPAAEFDTCLGDLYSVAWMEDA 264
GS+FEG LLPS+I VYA TASNA E+SW TYC D P E++TCLGDL+SVAWMEDA
Sbjct: 205 GSMFEGQLLPSNIGVYAMTASNATENSWATYC-----DTP--EYNTCLGDLFSVAWMEDA 257
Query: 265 EAHQEGRLAETLRQQYRTVKNRTSDEGTYTLGSHVMQYGDMALAPQSLDLYYMDTSPATA 324
+A + G ETL Q Y V RT+ SHV +YGD++L+ Q + LYY+ P T+
Sbjct: 258 DARRPGD-PETLGQLYDIVAKRTNL-------SHVSRYGDLSLSSQPVSLYYLPPGPGTS 309
Query: 325 NDHKLAAAGAKGSHSYTVSVNQRDADLLYLWRKYRRAGEGTAEKVEARERLVQEMGRRSR 384
A+ VNQRDA L+YLWRKY + VEA ERL++EM RRSR
Sbjct: 310 -----TASAVIDDEGRVGGVNQRDAGLVYLWRKYYE-----EKSVEAWERLLREMERRSR 359
Query: 385 VDRSVEMIGGLLLGGAKHKQQVVRERAA---LVEDWECLRSMVRTFEDQCGSLGQYGIKH 441
VD SV++IG +LLG + K+ + R A LV+DW+CL+SMVRTFE CG LGQYG+KH
Sbjct: 360 VDSSVDLIGDILLGDSSKKKLLHIRRPAGQPLVDDWDCLKSMVRTFEAHCGPLGQYGMKH 419
Query: 442 MRSFANICNAGVPHHAM 458
R+FAN+CNA + H+ M
Sbjct: 420 TRAFANMCNAALDHNHM 436
>Os04g0537900 Similar to C13 endopeptidase NP1 (Fragment)
Length = 497
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/423 (54%), Positives = 295/423 (69%), Gaps = 16/423 (3%)
Query: 40 TRWAVLIAGSNGFYNYRHQADVCHAYQIMRKGGVEEQNIVVMMYDDIAHNPDNPRPGLIF 99
TRWAVL+AGS+G+ NYRHQADVCHAYQI++KGGV+E+NIVV MYDDIAHN NPRPG I
Sbjct: 61 TRWAVLVAGSSGYGNYRHQADVCHAYQILQKGGVKEENIVVFMYDDIAHNILNPRPGTII 120
Query: 100 NHPSGPDVYAGVPKDYTGDDVNVNNFLAVLLGNRSALTGSGSGKVVASGPNDHVFVYYAD 159
NHP G DVYAGVPKDYTG V NF AVLLGN++A+TG GSGKV+ S P DH+F+YY+D
Sbjct: 121 NHPKGGDVYAGVPKDYTGHQVTTENFFAVLLGNKTAVTG-GSGKVIDSKPEDHIFIYYSD 179
Query: 160 HGGPGVLSMPADGEYLYADDLVKALKKKHAGGGYKSLVVYVEACESGSIFEGLLPSDISV 219
HGGPGVL MP + YLYA D +K L+KKHA Y +V+YVEACESGSIFEGL+P ++++
Sbjct: 180 HGGPGVLGMP-NLPYLYAGDFIKVLQKKHASNSYSKMVIYVEACESGSIFEGLMPENLNI 238
Query: 220 YATTASNAEESSWGTYCPGDDHDAPAAEFDTCLGDLYSVAWMEDAEAHQEGRLAETLRQQ 279
Y TTASNA E+SWGTYC + +P E+ TCLGD+YSVAWMED+E H + ET+ Q
Sbjct: 239 YVTTASNAVENSWGTYC-PGEEPSPPPEYITCLGDMYSVAWMEDSETHNLKK--ETIEDQ 295
Query: 280 YRTVKNRTSDEGTYTLGSHVMQYGDMALAPQSLDLYYMDTSPATAN-DHKLAAAGAKGSH 338
Y VK RTS+ GSHVM+YGD + L L Y +PA N ++L K
Sbjct: 296 YELVKKRTSNANKLNEGSHVMEYGDKTFKDEKLFL-YQGFNPANGNITNELIWPVPKA-- 352
Query: 339 SYTVSVNQRDADLLYLWRKYRRAGEGTAEKVEARERLVQEMGRRSRVDRSVEMIGGLLLG 398
+VNQRDADLL++W++Y + + +K+ A + + R +D S++ IG L+ G
Sbjct: 353 ----TVNQRDADLLFMWKRYEQLNGVSEDKLRALREIEDTIAHRKHLDSSIDFIGKLVFG 408
Query: 399 GAKHKQQVVRERAA---LVEDWECLRSMVRTFEDQCGSLGQYGIKHMRSFANICNAGVPH 455
+ R++ LV++W+CL+ MVR FE QCGSL QYG+K+MR+FANICN GV
Sbjct: 409 FENGPLALEAARSSGQPLVDNWDCLKKMVRIFESQCGSLTQYGMKYMRAFANICNNGVSE 468
Query: 456 HAM 458
M
Sbjct: 469 AKM 471
>Os02g0644000 Similar to C13 endopeptidase NP1 (Fragment)
Length = 446
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/404 (56%), Positives = 287/404 (71%), Gaps = 16/404 (3%)
Query: 59 ADVCHAYQIMRKGGVEEQNIVVMMYDDIAHNPDNPRPGLIFNHPSGPDVYAGVPKDYTGD 118
ADVCHAYQI+RKGG++E+NIVV MYDDIA+N NPRPG+I NHP G DVYAGVPKDYTGD
Sbjct: 30 ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGD 89
Query: 119 DVNVNNFLAVLLGNRSALTGSGSGKVVASGPNDHVFVYYADHGGPGVLSMPADGEYLYAD 178
+V NF AVLLGN++A+TG GS KV+ S PNDH+F++Y+DHGGPGVL MP + YLYA
Sbjct: 90 EVTAKNFYAVLLGNKTAVTG-GSRKVIDSKPNDHIFIFYSDHGGPGVLGMP-NLPYLYAA 147
Query: 179 DLVKALKKKHAGGGYKSLVVYVEACESGSIFEGLLPSDISVYATTASNAEESSWGTYCPG 238
D +K L++KHA Y +V+YVEACESGSIFEGL+P D+++Y TTASNAEESSWGTYCPG
Sbjct: 148 DFMKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTTASNAEESSWGTYCPG 207
Query: 239 DDHDAPAAEFDTCLGDLYSVAWMEDAEAHQEGRLAETLRQQYRTVKNRTSDEGTYTLGSH 298
+ +P +E+ TCLGDLYSV+WMED+E H E++++QY VK RTSD +Y GSH
Sbjct: 208 ME-PSPPSEYITCLGDLYSVSWMEDSETHNLKE--ESIKKQYEVVKKRTSDMNSYGAGSH 264
Query: 299 VMQYGDMALAPQSLDLYYMDTSPATAN-DHKLAAAGAKGSHSYTVSVNQRDADLLYLWRK 357
VM+YGD L L Y PA A +KL+ G K +VNQRDADLL+LWR+
Sbjct: 265 VMEYGDRTFKDDKLYL-YQGFDPANAEVKNKLSWEGPKA------AVNQRDADLLFLWRR 317
Query: 358 YRRAGEGTAEKVEARERLVQEMGRRSRVDRSVEMIGGLLLG---GAKHKQQVVRERAALV 414
Y + + EK++A + + R +D SV+++G LL G G Q V LV
Sbjct: 318 YELLHDKSEEKLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPSGQPLV 377
Query: 415 EDWECLRSMVRTFEDQCGSLGQYGIKHMRSFANICNAGVPHHAM 458
+DW+CL+ MVR FE CG L QYG+KHMR+FANICN G+ +M
Sbjct: 378 DDWDCLKRMVRIFESHCGPLTQYGMKHMRAFANICNNGISGASM 421
>Os02g0219400 Similar to Yarrowia lipolytica chromosome F of strain CLIB99 of
Yarrowia lipolytica
Length = 404
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 7/182 (3%)
Query: 34 PSSDETTRWAVLIAGSNGFYNYRHQADVCHAYQIMRKGGVEEQNIVVMMYDDIAHNPDNP 93
P + WAVL+ S ++NYRH A+ Y+ +++ G+ ++ I++M+ DD+A NP N
Sbjct: 40 PGAMHNNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNPRNN 99
Query: 94 RPGLIFNHPSGP-DVYA-GVPKDYTGDDVNVNNFLAVLLG-NRSALTGSGSGKVVASGPN 150
P +FN+ + ++Y V DY G +V V NFL VL G + SA+ S K + S
Sbjct: 100 YPAQVFNNENHQLNLYGDNVEVDYRGYEVTVENFLRVLTGRHESAVPRS---KRLLSDEG 156
Query: 151 DHVFVYYADHGGPGVLSMPADGEYLYADDLVKALKKKHAGGGYKSLVVYVEACESGSIFE 210
H+ +Y HGG L D E L + DL A+K+ +K L++ V+ C++ ++F
Sbjct: 157 SHILLYMTGHGGDEFLKF-QDSEELQSHDLADAVKQMKEKHRFKELLIMVDTCQAATLFS 215
Query: 211 GL 212
L
Sbjct: 216 QL 217
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,821,100
Number of extensions: 787791
Number of successful extensions: 1912
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1884
Number of HSP's successfully gapped: 6
Length of query: 474
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 369
Effective length of database: 11,553,331
Effective search space: 4263179139
Effective search space used: 4263179139
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)