Os01g0559600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to C13 endopeptidase NP1 precursor.
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Os01g0559600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to C13 endopeptidase NP1 precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.67 | 0.488 | 15.2 | 0.274 | 1.53 | -0.611 | 0.366 | -5.26 | 0.359 | 20.2 | 1.388 | 17319 | -- | -- |
| 109.66 | 0.488 | 15 | 1.48 | 1.53 | -1.22 | 0.314 | -- | 1.03 | 20.2 | 21.29 | 22671 | -- | -- |
| 106.53 | 0.481 | 15.2 | 0.23 | 1.53 | -0.602 | -- | -5.3 | 0.363 | 20.2 | 1.501 | 17316 | -- | -- |
| 108.3 | 0.485 | 15 | 1.67 | 1.58 | -1.14 | -- | -- | 1 | 20.1 | 30 | 22247 | -- | -- |
| 235.61 | 0.715 | 15.2 | 0.176 | -- | -0.661 | -- | -5.71 | 0.326 | -- | 1.5 | 17408 | -- | -- |
| 151.85 | 0.578 | 15.1 | 1.68 | 1.54 | -- | 0.443 | -- | 0.596 | 20.1 | -- | -- | -- | -- |
| 152.44 | 0.578 | 15.1 | 1.67 | 1.54 | -- | -- | -- | 0.597 | 20.1 | -- | -- | -- | -- |
| 239.63 | 0.724 | 15 | 1.66 | -- | -0.62 | -- | -- | 0.597 | -- | 1.5 | 17408 | -- | -- |
| 147.61 | 0.566 | 15.1 | -- | 1.58 | -1.27 | -- | -- | 0.646 | 20 | 37.62 | 23750 | -- | -- |
| 282.81 | 0.786 | 15 | 1.66 | -- | -- | -- | -- | 0.578 | -- | -- | -- | -- | -- |
| 225.91 | 0.703 | 15.1 | -- | 1.53 | -- | -- | -- | 0.411 | 20.2 | -- | -- | -- | -- |
| 275.17 | 0.773 | 15.1 | -- | -- | -1.38 | -- | -- | 0.774 | -- | 38.96 | 24627 | -- | -- |
| 355.13 | 0.88 | 15.1 | -- | -- | -- | -- | -- | 0.394 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.61 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 2 | 91.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 4 | 93.61 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 5 | 93.75 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 7 | 93.89 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 28 | 98.76 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 34 | 99.23 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 35 | 99.23 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 12 |
| 36 | 99.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 46 | 99.79 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 49 | 99.97 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 68 | 100.34 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 71 | 100.55 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 72 | 100.56 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 76 | 100.97 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 82 | 101.30 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 86 | 101.47 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 88 | 101.50 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 92 | 101.66 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 93 | 101.76 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 112 | 102.44 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 119 | 102.52 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 122 | 102.57 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 154 | 103.21 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 171 | 103.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 176 | 103.55 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 195 | 103.70 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 209 | 103.83 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 213 | 103.88 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 243 | 104.21 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 263 | 104.33 | wind | 5.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 268 | 104.39 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 7 |
| 269 | 104.40 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 273 | 104.42 | wind | 5.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 281 | 104.52 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 298 | 104.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 300 | 104.60 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 301 | 104.60 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 318 | 104.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 320 | 104.76 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 327 | 104.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 332 | 104.90 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 359 | 105.09 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 366 | 105.15 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 368 | 105.15 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 388 | 105.30 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 391 | 105.31 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 400 | 105.35 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 410 | 105.43 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 418 | 105.51 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 420 | 105.52 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 436 | 105.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 437 | 105.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 443 | 105.70 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 449 | 105.80 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 482 | 106.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 483 | 106.02 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 485 | 106.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 486 | 106.03 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 492 | 106.05 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 501 | 106.09 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 552 | 106.25 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 12 |
| 571 | 106.31 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 613 | 106.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 619 | 106.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 633 | 106.51 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 636 | 106.51 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 8 | 14 |
| 637 | 106.51 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 17 |
| 639 | 106.52 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 668 | 106.58 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 672 | 106.59 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 676 | 106.59 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 687 | 106.59 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 738 | 106.69 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 740 | 106.70 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 2 | NA |
| 768 | 106.71 | temperature | 25.0 | 43200 | > th | dose independent | sin | 23 | NA |
| 769 | 106.71 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 2 | NA |
| 777 | 106.71 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 2 | NA |
| 807 | 106.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 811 | 106.83 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 828 | 106.88 | temperature | 25.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 898 | 106.94 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 929 | 106.99 | temperature | 30.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 991 | 107.12 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 2 |