BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0559600 Os01g0559600|AK067597
(501 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0559600 Similar to C13 endopeptidase NP1 precursor 947 0.0
Os04g0537900 Similar to C13 endopeptidase NP1 (Fragment) 568 e-162
Os02g0644000 Similar to C13 endopeptidase NP1 (Fragment) 561 e-160
Os05g0593900 Similar to C13 endopeptidase NP1 precursor 560 e-160
Os06g0105100 472 e-133
AJ437265 122 6e-28
Os02g0219400 Similar to Yarrowia lipolytica chromosome F of... 104 2e-22
>Os01g0559600 Similar to C13 endopeptidase NP1 precursor
Length = 501
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/469 (96%), Positives = 454/469 (96%)
Query: 33 WEEEGSNLRLPSERAVXXXXXXXXXXXXXXXTRWAVLIAGSNGYYNYRHQADVCHAYQIM 92
WEEEGSNLRLPSERAV TRWAVLIAGSNGYYNYRHQADVCHAYQIM
Sbjct: 33 WEEEGSNLRLPSERAVAAGAAADDAAEAAEGTRWAVLIAGSNGYYNYRHQADVCHAYQIM 92
Query: 93 KRGGLKDENIIVFMYDDIAHNPENPRPGVIINHPQGGDVYAGVPKDYTGKEVNVKNLFAV 152
KRGGLKDENIIVFMYDDIAHNPENPRPGVIINHPQGGDVYAGVPKDYTGKEVNVKNLFAV
Sbjct: 93 KRGGLKDENIIVFMYDDIAHNPENPRPGVIINHPQGGDVYAGVPKDYTGKEVNVKNLFAV 152
Query: 153 LLGNKTAVKGGSGKVLDSGPNDHIFIFYSDHGGPGVLGMPTYPYLYGDDLVDVLKKKHAA 212
LLGNKTAVKGGSGKVLDSGPNDHIFIFYSDHGGPGVLGMPTYPYLYGDDLVDVLKKKHAA
Sbjct: 153 LLGNKTAVKGGSGKVLDSGPNDHIFIFYSDHGGPGVLGMPTYPYLYGDDLVDVLKKKHAA 212
Query: 213 GTYKSLVFYLEACESGSIFEGLLPNGINVYATTASNADESSWGTYCPGEYPSPPPEYDTC 272
GTYKSLVFYLEACESGSIFEGLLPNGINVYATTASNADESSWGTYCPGEYPSPPPEYDTC
Sbjct: 213 GTYKSLVFYLEACESGSIFEGLLPNGINVYATTASNADESSWGTYCPGEYPSPPPEYDTC 272
Query: 273 LGDLYSVAWMEDSDVHNLRTESLKQQYNLVKERTSVQHTYYSGSHVMEYGSLELNAHHVF 332
LGDLYSVAWMEDSDVHNLRTESLKQQYNLVKERTSVQHTYYSGSHVMEYGSLELNAHHVF
Sbjct: 273 LGDLYSVAWMEDSDVHNLRTESLKQQYNLVKERTSVQHTYYSGSHVMEYGSLELNAHHVF 332
Query: 333 MYMGSNPANDNATFVEDNSLPSFSRAVNQRDADLVYFWQKYRKLPESSPEKNEARKQLLE 392
MYMGSNPANDNATFVEDNSLPSFSRAVNQRDADLVYFWQKYRKLPESSPEKNEARKQLLE
Sbjct: 333 MYMGSNPANDNATFVEDNSLPSFSRAVNQRDADLVYFWQKYRKLPESSPEKNEARKQLLE 392
Query: 393 MMAHRSHVDNSVELIGNLLFGSEEGPRVLKAVRATGEPLVDDWSCLKSMVRTFEAQCGSL 452
MMAHRSHVDNSVELIGNLLFGSEEGPRVLKAVRATGEPLVDDWSCLKSMVRTFEAQCGSL
Sbjct: 393 MMAHRSHVDNSVELIGNLLFGSEEGPRVLKAVRATGEPLVDDWSCLKSMVRTFEAQCGSL 452
Query: 453 AQYGMKHMRSFANICNAGISAEAMAKVAAQACTSIPSNPWSSTHRGFSA 501
AQYGMKHMRSFANICNAGISAEAMAKVAAQACTSIPSNPWSSTHRGFSA
Sbjct: 453 AQYGMKHMRSFANICNAGISAEAMAKVAAQACTSIPSNPWSSTHRGFSA 501
>Os04g0537900 Similar to C13 endopeptidase NP1 (Fragment)
Length = 497
Score = 568 bits (1464), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/437 (62%), Positives = 335/437 (76%), Gaps = 6/437 (1%)
Query: 64 TRWAVLIAGSNGYYNYRHQADVCHAYQIMKRGGLKDENIIVFMYDDIAHNPENPRPGVII 123
TRWAVL+AGS+GY NYRHQADVCHAYQI+++GG+K+ENI+VFMYDDIAHN NPRPG II
Sbjct: 61 TRWAVLVAGSSGYGNYRHQADVCHAYQILQKGGVKEENIVVFMYDDIAHNILNPRPGTII 120
Query: 124 NHPQGGDVYAGVPKDYTGKEVNVKNLFAVLLGNKTAVKGGSGKVLDSGPNDHIFIFYSDH 183
NHP+GGDVYAGVPKDYTG +V +N FAVLLGNKTAV GGSGKV+DS P DHIFI+YSDH
Sbjct: 121 NHPKGGDVYAGVPKDYTGHQVTTENFFAVLLGNKTAVTGGSGKVIDSKPEDHIFIYYSDH 180
Query: 184 GGPGVLGMPTYPYLYGDDLVDVLKKKHAAGTYKSLVFYLEACESGSIFEGLLPNGINVYA 243
GGPGVLGMP PYLY D + VL+KKHA+ +Y +V Y+EACESGSIFEGL+P +N+Y
Sbjct: 181 GGPGVLGMPNLPYLYAGDFIKVLQKKHASNSYSKMVIYVEACESGSIFEGLMPENLNIYV 240
Query: 244 TTASNADESSWGTYCPGEYPSPPPEYDTCLGDLYSVAWMEDSDVHNLRTESLKQQYNLVK 303
TTASNA E+SWGTYCPGE PSPPPEY TCLGD+YSVAWMEDS+ HNL+ E+++ QY LVK
Sbjct: 241 TTASNAVENSWGTYCPGEEPSPPPEYITCLGDMYSVAWMEDSETHNLKKETIEDQYELVK 300
Query: 304 ERTSVQHTYYSGSHVMEYGSLELNAHHVFMYMGSNPANDNATFVEDNSL--PSFSRAVNQ 361
+RTS + GSHVMEYG +F+Y G NPAN N T N L P VNQ
Sbjct: 301 KRTSNANKLNEGSHVMEYGDKTFKDEKLFLYQGFNPANGNIT----NELIWPVPKATVNQ 356
Query: 362 RDADLVYFWQKYRKLPESSPEKNEARKQLLEMMAHRSHVDNSVELIGNLLFGSEEGPRVL 421
RDADL++ W++Y +L S +K A +++ + +AHR H+D+S++ IG L+FG E GP L
Sbjct: 357 RDADLLFMWKRYEQLNGVSEDKLRALREIEDTIAHRKHLDSSIDFIGKLVFGFENGPLAL 416
Query: 422 KAVRATGEPLVDDWSCLKSMVRTFEAQCGSLAQYGMKHMRSFANICNAGISAEAMAKVAA 481
+A R++G+PLVD+W CLK MVR FE+QCGSL QYGMK+MR+FANICN G+S M + +
Sbjct: 417 EAARSSGQPLVDNWDCLKKMVRIFESQCGSLTQYGMKYMRAFANICNNGVSEAKMMEASI 476
Query: 482 QACTSIPSNPWSSTHRG 498
AC S WS G
Sbjct: 477 NACGRYNSARWSPMTEG 493
>Os02g0644000 Similar to C13 endopeptidase NP1 (Fragment)
Length = 446
Score = 561 bits (1447), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/419 (63%), Positives = 323/419 (77%), Gaps = 2/419 (0%)
Query: 83 ADVCHAYQIMKRGGLKDENIIVFMYDDIAHNPENPRPGVIINHPQGGDVYAGVPKDYTGK 142
ADVCHAYQI+++GGLK+ENI+VFMYDDIA+N NPRPGVI+NHPQG DVYAGVPKDYTG
Sbjct: 30 ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGD 89
Query: 143 EVNVKNLFAVLLGNKTAVKGGSGKVLDSGPNDHIFIFYSDHGGPGVLGMPTYPYLYGDDL 202
EV KN +AVLLGNKTAV GGS KV+DS PNDHIFIFYSDHGGPGVLGMP PYLY D
Sbjct: 90 EVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGGPGVLGMPNLPYLYAADF 149
Query: 203 VDVLKKKHAAGTYKSLVFYLEACESGSIFEGLLPNGINVYATTASNADESSWGTYCPGEY 262
+ VL++KHA+ TY +V Y+EACESGSIFEGL+P +N+Y TTASNA+ESSWGTYCPG
Sbjct: 150 MKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTTASNAEESSWGTYCPGME 209
Query: 263 PSPPPEYDTCLGDLYSVAWMEDSDVHNLRTESLKQQYNLVKERTSVQHTYYSGSHVMEYG 322
PSPP EY TCLGDLYSV+WMEDS+ HNL+ ES+K+QY +VK+RTS ++Y +GSHVMEYG
Sbjct: 210 PSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVKKRTSDMNSYGAGSHVMEYG 269
Query: 323 SLELNAHHVFMYMGSNPANDNATFVEDNSLPSFSRAVNQRDADLVYFWQKYRKLPESSPE 382
+++Y G +PA NA S AVNQRDADL++ W++Y L + S E
Sbjct: 270 DRTFKDDKLYLYQGFDPA--NAEVKNKLSWEGPKAAVNQRDADLLFLWRRYELLHDKSEE 327
Query: 383 KNEARKQLLEMMAHRSHVDNSVELIGNLLFGSEEGPRVLKAVRATGEPLVDDWSCLKSMV 442
K +A +++ + + HR +D+SV+L+G LLFG GP VL+AVR +G+PLVDDW CLK MV
Sbjct: 328 KLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPSGQPLVDDWDCLKRMV 387
Query: 443 RTFEAQCGSLAQYGMKHMRSFANICNAGISAEAMAKVAAQACTSIPSNPWSSTHRGFSA 501
R FE+ CG L QYGMKHMR+FANICN GIS +M + + C+S S WSS +G+SA
Sbjct: 388 RIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSSHNSGRWSSLVQGYSA 446
>Os05g0593900 Similar to C13 endopeptidase NP1 precursor
Length = 474
Score = 560 bits (1444), Expect = e-160, Method: Compositional matrix adjust.
Identities = 285/470 (60%), Positives = 344/470 (73%), Gaps = 39/470 (8%)
Query: 33 WEEEGSNLRLPSERAVXXXXXXXXXXXXXXXTRWAVLIAGSNGYYNYRHQADVCHAYQIM 92
W+EE LRLPS TRWAVLIAGSNG+YNYRHQADVCHAYQIM
Sbjct: 26 WQEE--FLRLPSS---------------DETTRWAVLIAGSNGFYNYRHQADVCHAYQIM 68
Query: 93 KRGGLKDENIIVFMYDDIAHNPENPRPGVIINHPQGGDVYAGVPKDYTGKEVNVKNLFAV 152
++GG++++NI+V MYDDIAHNP+NPRPG+I NHP G DVYAGVPKDYTG +VNV N AV
Sbjct: 69 RKGGVEEQNIVVMMYDDIAHNPDNPRPGLIFNHPSGPDVYAGVPKDYTGDDVNVNNFLAV 128
Query: 153 LLGNKTAVKG-GSGKVLDSGPNDHIFIFYSDHGGPGVLGMPT-YPYLYGDDLVDVLKKKH 210
LLGN++A+ G GSGKV+ SGPNDH+F++Y+DHGGPGVL MP YLY DDLV LKKKH
Sbjct: 129 LLGNRSALTGSGSGKVVASGPNDHVFVYYADHGGPGVLSMPADGEYLYADDLVKALKKKH 188
Query: 211 AAGTYKSLVFYLEACESGSIFEGLLPNGINVYATTASNADESSWGTYCPG-EYPSPPPEY 269
A G YKSLV Y+EACESGSIFEGLLP+ I+VYATTASNA+ESSWGTYCPG ++ +P E+
Sbjct: 189 AGGGYKSLVVYVEACESGSIFEGLLPSDISVYATTASNAEESSWGTYCPGDDHDAPAAEF 248
Query: 270 DTCLGDLYSVAWMEDSDVHN--LRTESLKQQYNLVKERTSVQHTYYSGSHVMEYGSLELN 327
DTCLGDLYSVAWMED++ H E+L+QQY VK RTS + TY GSHVM+YG + L
Sbjct: 249 DTCLGDLYSVAWMEDAEAHQEGRLAETLRQQYRTVKNRTSDEGTYTLGSHVMQYGDMALA 308
Query: 328 AHHV-FMYMGSNPANDNATFVEDNSLP--------SFSRAVNQRDADLVYFWQKYRKLPE 378
+ YM ++PA N D+ L S++ +VNQRDADL+Y W+KYR+ E
Sbjct: 309 PQSLDLYYMDTSPATAN-----DHKLAAAGAKGSHSYTVSVNQRDADLLYLWRKYRRAGE 363
Query: 379 SSPEKNEARKQLLEMMAHRSHVDNSVELIGNLLFGSEEGPRVLKAVRATGEPLVDDWSCL 438
+ EK EAR++L++ M RS VD SVE+IG LL G + + + RA LV+DW CL
Sbjct: 364 GTAEKVEARERLVQEMGRRSRVDRSVEMIGGLLLGGAKHKQQVVRERAA---LVEDWECL 420
Query: 439 KSMVRTFEAQCGSLAQYGMKHMRSFANICNAGISAEAMAKVAAQACTSIP 488
+SMVRTFE QCGSL QYG+KHMRSFANICNAG+ AMAK A+ AC S P
Sbjct: 421 RSMVRTFEDQCGSLGQYGIKHMRSFANICNAGVPHHAMAKAASLACPSPP 470
>Os06g0105100
Length = 452
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/461 (55%), Positives = 311/461 (67%), Gaps = 44/461 (9%)
Query: 33 WEEEGSNLRLPSERAVXXXXXXXXXXXXXXXTRWAVLIAGSNGYYNYRHQADVCHAYQIM 92
W+E LRLP+E T+WA+LIAGS GY NYRHQADVCHAYQIM
Sbjct: 27 WQEF---LRLPTENG---------------GTKWALLIAGSKGYENYRHQADVCHAYQIM 68
Query: 93 KRGGLKDENIIVFMYDDIAHNPENPRPGVIINHPQGGDVYAGVPKDYTGKEVNVKNLFAV 152
K+GGLKD+NI+V MYDDIA+NPENP GVIIN P G +VYAGVPKDY G +VN N AV
Sbjct: 69 KKGGLKDQNIVVMMYDDIAYNPENPHKGVIINKPNGPNVYAGVPKDYNGNDVNKNNFLAV 128
Query: 153 LLGNKTAVKG-GSGKVLDSGPNDHIFIFYSDHGGPGVLGMPTYPYLYGDDLVDVLKKKHA 211
LLG K+A+ G GSGKV+ SGPNDHIF++YSDHG PG + MP+ L+ +DL LK K+A
Sbjct: 129 LLGKKSALTGAGSGKVISSGPNDHIFVYYSDHGSPGYVCMPSGGNLHANDLSQALKNKNA 188
Query: 212 AGTYKSLVFYLEACESGSIFEG-LLPNGINVYATTASNADESSWGTYCPGEYPSPPPEYD 270
AG YK+LV Y+EACESGS+FEG LLP+ I VYA TASNA E+SW TYC PEY+
Sbjct: 189 AGAYKNLVVYVEACESGSMFEGQLLPSNIGVYAMTASNATENSWATYC------DTPEYN 242
Query: 271 TCLGDLYSVAWMEDSDVHNL-RTESLKQQYNLVKERTSVQHTYYSGSHVMEYGSLELNAH 329
TCLGDL+SVAWMED+D E+L Q Y++V +RT++ SHV YG L L++
Sbjct: 243 TCLGDLFSVAWMEDADARRPGDPETLGQLYDIVAKRTNL-------SHVSRYGDLSLSSQ 295
Query: 330 HVFM-YMGSNPANDNATFVEDNSLPSFSRAVNQRDADLVYFWQKYRKLPESSPEKN-EAR 387
V + Y+ P A+ V D+ VNQRDA LVY W+KY + EK+ EA
Sbjct: 296 PVSLYYLPPGPGTSTASAVIDDE--GRVGGVNQRDAGLVYLWRKYYE------EKSVEAW 347
Query: 388 KQLLEMMAHRSHVDNSVELIGNLLFGSEEGPRVLKAVRATGEPLVDDWSCLKSMVRTFEA 447
++LL M RS VD+SV+LIG++L G ++L R G+PLVDDW CLKSMVRTFEA
Sbjct: 348 ERLLREMERRSRVDSSVDLIGDILLGDSSKKKLLHIRRPAGQPLVDDWDCLKSMVRTFEA 407
Query: 448 QCGSLAQYGMKHMRSFANICNAGISAEAMAKVAAQACTSIP 488
CG L QYGMKH R+FAN+CNA + MAK A++AC P
Sbjct: 408 HCGPLGQYGMKHTRAFANMCNAALDHNHMAKAASKACMHPP 448
>AJ437265
Length = 93
Score = 122 bits (306), Expect = 6e-28, Method: Composition-based stats.
Identities = 59/78 (75%), Positives = 63/78 (80%)
Query: 345 TFVEDNSLPSFSRAVNQRDADLVYFWQKYRKLPESSPEKNEARKQLLEMMAHRSHVDNSV 404
+F E NSLPSFSRAVNQRDA LVYFW KYRKLPESS EKNEARKQLLEMMAHRSHVDNSV
Sbjct: 2 SFXEXNSLPSFSRAVNQRDAALVYFWXKYRKLPESSSEKNEARKQLLEMMAHRSHVDNSV 61
Query: 405 ELIGNLLFGSEEGPRVLK 422
EL L +E +L+
Sbjct: 62 ELFXXXLXWXDEXQGILR 79
>Os02g0219400 Similar to Yarrowia lipolytica chromosome F of strain CLIB99 of
Yarrowia lipolytica
Length = 404
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Query: 66 WAVLIAGSNGYYNYRHQADVCHAYQIMKRGGLKDENIIVFMYDDIAHNPENPRPGVIINH 125
WAVL+ S ++NYRH A+ Y+ +KR G+ DE II+ + DD+A NP N P + N+
Sbjct: 48 WAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNPRNNYPAQVFNN 107
Query: 126 PQGG-DVYA-GVPKDYTGKEVNVKNLFAVLLGNKTAVKGGSGKVLDSGPNDHIFIFYSDH 183
++Y V DY G EV V+N VL G + S ++L S HI ++ + H
Sbjct: 108 ENHQLNLYGDNVEVDYRGYEVTVENFLRVLTGRHESAVPRSKRLL-SDEGSHILLYMTGH 166
Query: 184 GGPGVLGMPTYPYLYGDDLVDVLKKKHAAGTYKSLVFYLEACESGSIFEGLLPNGINVYA 243
GG L L DL D +K+ +K L+ ++ C++ ++F L G V
Sbjct: 167 GGDEFLKFQDSEELQSHDLADAVKQMKEKHRFKELLIMVDTCQAATLFSQLQSPG--VLT 224
Query: 244 TTASNADESSWGTYCPGEYPSPPPEYDTCLGDLYSVAWMEDSDVH-NLRTESLKQQYN 300
+S E+S+ + + + T Y++A+ E +++ N SL YN
Sbjct: 225 IGSSMKGENSYSHHLDSDIGVSVVDRFT----FYTLAFFEKLNMYSNASLNSLFNSYN 278
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,459,548
Number of extensions: 790353
Number of successful extensions: 1815
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1799
Number of HSP's successfully gapped: 7
Length of query: 501
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 396
Effective length of database: 11,553,331
Effective search space: 4575119076
Effective search space used: 4575119076
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)