BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0559600 Os05g0559600|AK068237
(451 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0559600 Glycosyl transferase, family 43 protein 880 0.0
Os01g0675500 Similar to Glycoprotein-specific UDP-glucurony... 625 e-179
Os10g0205300 Glycosyl transferase, family 43 protein 215 4e-56
Os04g0103100 Glycosyl transferase, family 43 protein 204 1e-52
Os05g0123100 Glycosyl transferase, family 43 protein 156 4e-38
Os03g0287800 Glycosyl transferase, family 43 protein 155 5e-38
Os07g0694400 Glycosyl transferase, family 43 protein 121 9e-28
Os01g0157700 119 4e-27
>Os05g0559600 Glycosyl transferase, family 43 protein
Length = 451
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/451 (95%), Positives = 429/451 (95%)
Query: 1 MVSSRRNTGGIQRDGSLRDWSEFVDPSPSPKLLYSQSYVAMRGLLSSLVSMDFALLSSRL 60
MVSSRRNTGGIQRDGSLRDWSEFVDPSPSPKLLYSQSYVAMRGLLSSLVSMDFALLSSRL
Sbjct: 1 MVSSRRNTGGIQRDGSLRDWSEFVDPSPSPKLLYSQSYVAMRGLLSSLVSMDFALLSSRL 60
Query: 61 KSAWAAILSQRHTRSPERSKSRGLSCKRLAFHLFVCFMVGIFIGFMPFFSVDVSQKIVSE 120
KSAWAAILSQRHTRSPERSKSRGLSCKRLAFHLFVCFMVGIFIGFMPFFSVDVSQKIVSE
Sbjct: 61 KSAWAAILSQRHTRSPERSKSRGLSCKRLAFHLFVCFMVGIFIGFMPFFSVDVSQKIVSE 120
Query: 121 NGRLPFDEGAVDRGMVDGKVKELETXXXXXXXXXXXXXXXXXXXXXXAMLDDEADFVESA 180
NGRLPFDEGAVDRGMVDGKVKELET AMLDDEADFVESA
Sbjct: 121 NGRLPFDEGAVDRGMVDGKVKELETIVVEKEVDIIDESEVEESPPVPAMLDDEADFVESA 180
Query: 181 PAIPDINDLDITVRKLLIIVTITTVRPQQAYYLNRLAHVLKTVQSPLLWLVVEWPDQSFQ 240
PAIPDINDLDITVRKLLIIVTITTVRPQQAYYLNRLAHVLKTVQSPLLWLVVEWPDQSFQ
Sbjct: 181 PAIPDINDLDITVRKLLIIVTITTVRPQQAYYLNRLAHVLKTVQSPLLWLVVEWPDQSFQ 240
Query: 241 TAEILRSSGVMYRHLICRKNTTSVRKIAVCQRNTAIYHIKKHRLDGIMHFADEERSYMSD 300
TAEILRSSGVMYRHLICRKNTTSVRKIAVCQRNTAIYHIKKHRLDGIMHFADEERSYMSD
Sbjct: 241 TAEILRSSGVMYRHLICRKNTTSVRKIAVCQRNTAIYHIKKHRLDGIMHFADEERSYMSD 300
Query: 301 VFEEMRKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGWNTIQNIQKKSAVRRFPVGF 360
VFEEMRKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGWNTIQNIQKKSAVRRFPVGF
Sbjct: 301 VFEEMRKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGWNTIQNIQKKSAVRRFPVGF 360
Query: 361 SGFAFNSTMLWDPERWNRPPMDSVIVHSGGRGGLQESRFIEKLVKHERQIEGLPEDCNRV 420
SGFAFNSTMLWDPERWNRPPMDSVIVHSGGRGGLQESRFIEKLVKHERQIEGLPEDCNRV
Sbjct: 361 SGFAFNSTMLWDPERWNRPPMDSVIVHSGGRGGLQESRFIEKLVKHERQIEGLPEDCNRV 420
Query: 421 MVWNFNLEPPLLNVPPGWSLHKNLDAVIPVT 451
MVWNFNLEPPLLNVPPGWSLHKNLDAVIPVT
Sbjct: 421 MVWNFNLEPPLLNVPPGWSLHKNLDAVIPVT 451
>Os01g0675500 Similar to Glycoprotein-specific UDP-glucuronyltransferase-like
protein
Length = 446
Score = 625 bits (1611), Expect = e-179, Method: Compositional matrix adjust.
Identities = 300/449 (66%), Positives = 354/449 (78%), Gaps = 5/449 (1%)
Query: 4 SRRNTGGIQRDGSLRDWSEFVDPSPSPKLLYSQSYVAMRGLLSSLVSMDFALLSSRLKSA 63
SRRN G +QR+GS++DW EF DPSPSPKL YSQSYVAMRGLL+S+ S+D L+SS LKSA
Sbjct: 2 SRRNAGAMQREGSVKDWEEF-DPSPSPKLAYSQSYVAMRGLLTSVASLDLVLMSSSLKSA 60
Query: 64 WAAILSQRHTRSPERSKSRGLSCKRLAFHLFVCFMVGIFIGFMPFFSVDVSQKIVSENGR 123
WAAI S +H RS ERS+S+G+S KR L VCFMVGIFIGF P FSVD+ KI SENGR
Sbjct: 61 WAAISSHKHARSLERSRSKGMSLKRAMLQLLVCFMVGIFIGFTPPFSVDLPGKIASENGR 120
Query: 124 LPFDEGAVDR-GMVDGKVKELETXXXXXXXXXXXXXXXXXXXXXXAMLDDEADFVESAPA 182
LPFD A+DR MV+ + +LE AMLDDEADFVE++P
Sbjct: 121 LPFDGDAIDRRQMVERQGTKLEPFVAEAESEASSEPQVEEGPPVPAMLDDEADFVEASPI 180
Query: 183 IPDINDLDITVRKLLIIVTITTVRPQQAYYLNRLAHVLKTVQSPLLWLVVEWPDQSFQTA 242
+ +ND I VRK LII+T T+VRP QAYYLNRLAHVLK V PLLW+V EWP QS +TA
Sbjct: 181 VHSVNDSGIVVRKHLIIITTTSVRPHQAYYLNRLAHVLKDVPPPLLWIVAEWPYQSRETA 240
Query: 243 EILRSSGVMYRHLICRKNTTSVRKIAVCQRNTAIYHIKKHRLDGIMHFADEERSYMSDVF 302
EILRSSG+MYRHLIC +NTT++RKI VCQ+N AI+HIKKHRLDGI+HFADEER+Y +D+F
Sbjct: 241 EILRSSGIMYRHLICNRNTTNIRKIVVCQKNNAIFHIKKHRLDGIVHFADEERAYSADLF 300
Query: 303 EEMRKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGWNTIQNIQKKSAVRRFPVGFSG 362
EEMRKIRRFG WPVAIH G KYRVVLEGP+CKGN+VTGW+T Q++ RRFP+GFSG
Sbjct: 301 EEMRKIRRFGTWPVAIHVGTKYRVVLEGPVCKGNQVTGWHT---NQRRGVSRRFPIGFSG 357
Query: 363 FAFNSTMLWDPERWNRPPMDSVIVHSGGRGGLQESRFIEKLVKHERQIEGLPEDCNRVMV 422
FAFNST+LWDP+RWN P ++S+IVHSGGRGGLQESRFIEKLV+ E Q+EGL ++C RVMV
Sbjct: 358 FAFNSTILWDPQRWNSPTLESIIVHSGGRGGLQESRFIEKLVEDESQMEGLGDNCTRVMV 417
Query: 423 WNFNLEPPLLNVPPGWSLHKNLDAVIPVT 451
WNF LEPP +N P GW L +NLDAV+P+T
Sbjct: 418 WNFELEPPQVNYPIGWLLQRNLDAVVPIT 446
>Os10g0205300 Glycosyl transferase, family 43 protein
Length = 351
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 160/271 (59%), Gaps = 17/271 (6%)
Query: 194 RKLLIIVTITTVRPQQAYYLNRLAHVLKTVQSPLLWLVVEWPDQSFQTAEILRSSGVMYR 253
RKLL++VT T RP QAYYL RLAH L+ SPLLWLVVE + TA +LR GVMYR
Sbjct: 76 RKLLLVVTPTRARPLQAYYLRRLAHTLRLAPSPLLWLVVESGAATRDTAALLRGCGVMYR 135
Query: 254 HL----------ICRKNTTSVRKIAVC----QRNTAIYHIKKHRLDGIMHFADEERSYMS 299
HL R+ + AV QRNTA+ HI+ HRL GI++FADE+ Y
Sbjct: 136 HLSSPVPDAPQDRPRRRGRRQDRPAVDSRARQRNTALDHIEHHRLHGIVYFADEDNVYSL 195
Query: 300 DVFEEMRKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGWNTIQNIQKKSAVRRFPVG 359
D+F +R IR FG WPVA K + +L+GP+C+G+RV GW+T + + RRF V
Sbjct: 196 DLFYHLRDIRSFGTWPVATLAPGKSKTILQGPVCEGSRVVGWHTTDRSKNQ---RRFHVD 252
Query: 360 FSGFAFNSTMLWDPERWNRPPMDSVIVHSGGRGGLQESRFIEKLVKHERQIEGLPEDCNR 419
SGFAFNS+ LWD + + + + G QE+ FIE+LV+ E +EG+P C++
Sbjct: 253 MSGFAFNSSKLWDAKNRGHQAWNYIRQLDTAKEGFQETAFIEQLVEDETHMEGVPPGCSK 312
Query: 420 VMVWNFNLEPPLLNVPPGWSLHKNLDAVIPV 450
+M ++ +LE GW +NLD +IP+
Sbjct: 313 IMNFHLHLEDKNAIYLNGWQTTQNLDVIIPL 343
>Os04g0103100 Glycosyl transferase, family 43 protein
Length = 381
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 161/272 (59%), Gaps = 11/272 (4%)
Query: 181 PAIPDINDLDITVRKLLIIVTITTVRPQQAYYLNRLAHVLKTVQ-SPLLWLVVEWPDQSF 239
P+ P N KLLI+VT T RP QAYYL R+AH L+ + SPLLW+VV+ + +
Sbjct: 118 PSTPHSN------HKLLIVVTPTRARPSQAYYLTRMAHTLRLLHDSPLLWIVVQAGNPTP 171
Query: 240 QTAEILRSSGVMYRHLICRKN-TTSVRKIAVCQRNTAIYHIKKHRLDGIMHFADEERSYM 298
+ A LR + V++R++ C N S Q N A+ + HRLDG+++FADEE Y
Sbjct: 172 EAAAALRRTAVLHRYVGCCHNINASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYS 231
Query: 299 SDVFEEMRKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGWNTIQNIQKKSAVRRFPV 358
+F +R+IRRF WPV + VVL+GP+CK +V GW+T + K +RRF +
Sbjct: 232 LHLFHHLRQIRRFATWPVPEISQHTNEVVLQGPVCKQGQVVGWHTTHDGNK---LRRFHL 288
Query: 359 GFSGFAFNSTMLWDPERWNRPPMDSVIVHSGGRGGLQESRFIEKLVKHERQIEGLPEDCN 418
SGFAFNSTMLWDP+ + +S+ + LQ S F+E+LV+ E Q+EG+P DC+
Sbjct: 289 AMSGFAFNSTMLWDPKLRSHLAWNSIRHPEMVKESLQGSAFVEQLVEDESQMEGIPADCS 348
Query: 419 RVMVWNFNLEPPLLNVPPGWSLHKNLDAVIPV 450
++M W+ + P GW + +LD +IP+
Sbjct: 349 QIMNWHVPFGSESVVYPKGWRVATDLDVIIPL 380
>Os05g0123100 Glycosyl transferase, family 43 protein
Length = 371
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 39/211 (18%)
Query: 243 EILRSSGVMYRHLICR--KNTTSVRKIAVCQRNTAIYHIKKHRLDGIMHFADEERSYMSD 300
E+LR +GVMYRHL R +N T+ A QRN A+ H++KHRL G++HFAD Y +
Sbjct: 157 EVLRGTGVMYRHLAFRPEENFTTADAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAH 216
Query: 301 VFEEMRKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGW---------------NTIQ 345
F+E+R+I FG WPVA + + +VV+EGP+C ++V GW NT
Sbjct: 217 FFDEIRQIEAFGTWPVATMSAGEKKVVVEGPLCSDSKVVGWFSRDFNDGTTRAVTYNTEA 276
Query: 346 NIQKKSA--VRRFPVGFSGFAFNSTMLWDPERWNRP------PMDSVIVHSGGRGGLQES 397
++ A R + SGFAFNS++LWDPERW RP DS+
Sbjct: 277 DLNPAGAAGTRAHTIDVSGFAFNSSILWDPERWGRPTSLPDTSQDSI------------- 323
Query: 398 RFIEKLVKHER-QIEGLPEDCNRVMVWNFNL 427
+F++++V +R +++G+P DC+++MVW + +
Sbjct: 324 KFVQEVVLEDRTKLKGIPSDCSQIMVWQYTM 354
>Os03g0287800 Glycosyl transferase, family 43 protein
Length = 339
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 135/249 (54%), Gaps = 27/249 (10%)
Query: 194 RKLLIIVTITTVRP----QQAYYLNRLAHVLKTVQSPLLWLVVEWPDQSFQTAEILRSSG 249
+ LL++VT T P Q+A L R+AH L+ V PLLW+VVE TA +LR++G
Sbjct: 95 QPLLVVVTTTESTPSAAGQRAAALTRMAHTLRLVPPPLLWVVVEANPDVAATARLLRTTG 154
Query: 250 VMYRHLICRKNTTSVRKIAV----CQRNTAIYHIKKHRLDGIMHFADEERSYMSDVFEEM 305
+MYRHL + N T A QRN A+ HI+ HRL G++ FA ++ F+++
Sbjct: 155 LMYRHLTYKDNFTVADAAAGKERHHQRNVALGHIEHHRLAGVVLFAGLGDTFDLRFFDQL 214
Query: 306 RKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGWNTIQNIQKKS------------AV 353
R+IR FGAWPVA + + +VV++GP C + V GW ++ S A
Sbjct: 215 RQIRTFGAWPVATMSQNERKVVVQGPACSSSSVAGWFSMDLSNATSPVAVGGAGYGAAAA 274
Query: 354 RRFPVGFSGFAFNSTMLWDPERWNRPPMDSVIVHSGGRGGLQESRFIEKLVKHE-RQIEG 412
R + GFAFNS++LWDPERW R P S +F++++V + ++ G
Sbjct: 275 RPRELDVHGFAFNSSVLWDPERWGRYPT------SEPDKSQDSVKFVQQVVLEDYSKVRG 328
Query: 413 LPEDCNRVM 421
+P DC+ VM
Sbjct: 329 IPSDCSEVM 337
>Os07g0694400 Glycosyl transferase, family 43 protein
Length = 338
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 137/263 (52%), Gaps = 39/263 (14%)
Query: 195 KLLIIVTITTVR---PQQAYYLNRLAHVLKTVQSPLLWLVVE-WPDQSFQ---TAEILRS 247
+L+++VT T ++A L R AH L+ V PLLWLVVE P + TA +LR
Sbjct: 81 QLVVVVTTTEQSDDSERRAAGLTRTAHALRLVSPPLLWLVVEEAPAEKHAAPPTARLLRR 140
Query: 248 SGVMYRHLICRKN------TTSVRKIAVCQRNTAIYHIKKHRLDGIMHFADEERSYMSDV 301
+GV++RHL+ ++ S+R+ QRN A+ HI+ HR+ G++ F Y +
Sbjct: 141 TGVVHRHLLMKQGDDDFSMQISMRREQ--QRNVALRHIEDHRIAGVVLFGGLADIYDLRL 198
Query: 302 FEEMRKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVT-----GW-----NTIQNIQKKS 351
+R IR FGAWPVA + + +V+++GP+C + GW + ++++
Sbjct: 199 LHHLRDIRTFGAWPVATVSAYERKVMVQGPLCINTSSSSVITRGWFDMDMDMAAGGERRA 258
Query: 352 AVRRFP----VGFSGFAFNSTMLWDPERWNRPPMDSVIVHSGGRGGLQESRFIEKLVKHE 407
A R P + GFAF+S MLWDP RW+R P+ S + +F++++ E
Sbjct: 259 AADRPPPETLMEVGGFAFSSWMLWDPHRWDRFPL------SDPDASQESVKFVQRVAVEE 312
Query: 408 ---RQIEGLPE-DCNRVMVWNFN 426
G+P+ DC+++M+W
Sbjct: 313 YNQSTTRGMPDSDCSQIMLWRIQ 335
>Os01g0157700
Length = 549
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 140/307 (45%), Gaps = 65/307 (21%)
Query: 174 ADFVESAPAIPDINDLDITVRKLLIIVTITTVRP--------QQAYYLNRLAHVLKTVQS 225
A F + A P + +LD LL+IVT+T RP Q L RL H L+ V+
Sbjct: 49 ASFRPTVAATPPVPELD-----LLLIVTVT--RPDDDDDDGMSQEASLTRLGHTLRLVEP 101
Query: 226 PLLWLVV--EWPDQSFQTAEILRSSGVMYRHLI-CRKNTTSVRKIAV-CQRNTAIYHIKK 281
PLLW+VV E + + LR + VM+RHL +N T V Q N A+ HI+
Sbjct: 102 PLLWIVVGAENTTATARAVNALRGTRVMFRHLTYAAENFTGPAGDEVDYQMNVALSHIQL 161
Query: 282 HRLDGIMHFADEERSYMSDVFEEMRKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGW 341
HRL G++HFA Y F+++R+ R AWP+A + V LEGP C +++TGW
Sbjct: 162 HRLPGVVHFAAASSVYDLRFFQQLRQTRGIAAWPIATVSSADQTVKLEGPTCNSSQITGW 221
Query: 342 ------------------NTIQ--------------------NIQKKSAVRRFP-VGFSG 362
NT Q N K+++ P +
Sbjct: 222 YSKDSSSNITETTWDSSSNTTQTTWDSSSNKTQTTTLAALDTNASKQNSSSGPPEINMHA 281
Query: 363 FAFNSTMLWDPERWNRPPMDSVIVHSGGRGGLQESRFIEKLVKHERQIEGLPEDC--NRV 420
F S+MLWD ER+ R S ++ + +Q R + ++ E + G+P DC +++
Sbjct: 282 VGFKSSMLWDSERFTRRDNSSTGIN---QDLIQAVRQM--MINDEDKKRGIPSDCSDSQI 336
Query: 421 MVWNFNL 427
M+W+ ++
Sbjct: 337 MLWHLDM 343
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,072,377
Number of extensions: 591996
Number of successful extensions: 1166
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1147
Number of HSP's successfully gapped: 8
Length of query: 451
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 347
Effective length of database: 11,605,545
Effective search space: 4027124115
Effective search space used: 4027124115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)