BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0447200 Os05g0447200|AK111849
(482 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0447200 Similar to AUX1-like protein 909 0.0
Os01g0856500 Amino acid/polyamine transporter II family pro... 782 0.0
Os03g0244600 Similar to AUX1-like protein 692 0.0
Os10g0147400 Similar to Auxin influx carrier protein 678 0.0
Os11g0169200 Amino acid/polyamine transporter II family pro... 669 0.0
>Os05g0447200 Similar to AUX1-like protein
Length = 482
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/482 (93%), Positives = 449/482 (93%)
Query: 1 MVPAGDQAEEAIVADAGKEEAEVRAAMGVEQDGKFSMTSLLWHGGSVWDAWFSCASNQVA 60
MVPAGDQAEEAIVADAGKEEAEVRAAMGVEQDGKFSMTSLLWHGGSVWDAWFSCASNQVA
Sbjct: 1 MVPAGDQAEEAIVADAGKEEAEVRAAMGVEQDGKFSMTSLLWHGGSVWDAWFSCASNQVA 60
Query: 61 QVLLTLPYSFXXXXXXXXXXXXVFYGLMGSWTAYLISVLYVEYRARKEKEGVSFKNHVIQ 120
QVLLTLPYSF VFYGLMGSWTAYLISVLYVEYRARKEKEGVSFKNHVIQ
Sbjct: 61 QVLLTLPYSFSQLGMLSGLLLQVFYGLMGSWTAYLISVLYVEYRARKEKEGVSFKNHVIQ 120
Query: 121 WFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACC 180
WFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACC
Sbjct: 121 WFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACC 180
Query: 181 STTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAAVHGQVDGVTHSGPSKMVLYFTGATN 240
STTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAAVHGQVDGVTHSGPSKMVLYFTGATN
Sbjct: 181 STTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAAVHGQVDGVTHSGPSKMVLYFTGATN 240
Query: 241 ILYTFGGHAVTVEIMHAMWKPQKFKYIYLVATLYVFTLTLPSASAMYWAFGDALLTHSNA 300
ILYTFGGHAVTVEIMHAMWKPQKFKYIYLVATLYVFTLTLPSASAMYWAFGDALLTHSNA
Sbjct: 241 ILYTFGGHAVTVEIMHAMWKPQKFKYIYLVATLYVFTLTLPSASAMYWAFGDALLTHSNA 300
Query: 301 FSLLPRSGWRDAAVILMLIHQFITFGFACTPLYFVWEKAIGMHGTRSVLTRALARLPIVV 360
FSLLPRSGWRDAAVILMLIHQFITFGFACTPLYFVWEKAIGMHGTRSVLTRALARLPIVV
Sbjct: 301 FSLLPRSGWRDAAVILMLIHQFITFGFACTPLYFVWEKAIGMHGTRSVLTRALARLPIVV 360
Query: 361 PIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLSHILTYRSASARLNAAEKPPPFLPSW 420
PIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLSHILTYRSASARLNAAEKPPPFLPSW
Sbjct: 361 PIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLSHILTYRSASARLNAAEKPPPFLPSW 420
Query: 421 SGMFXXXXXXXXXXXXXXXXXXXXXSVTNFIKQIDTFGLFAKCYQCPPRAHAGAPLPAPP 480
SGMF SVTNFIKQIDTFGLFAKCYQCPPRAHAGAPLPAPP
Sbjct: 421 SGMFVVNVFVVAWVLVVGFGLGGWASVTNFIKQIDTFGLFAKCYQCPPRAHAGAPLPAPP 480
Query: 481 RH 482
RH
Sbjct: 481 RH 482
>Os01g0856500 Amino acid/polyamine transporter II family protein
Length = 492
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/494 (79%), Positives = 418/494 (84%), Gaps = 14/494 (2%)
Query: 1 MVPAGDQAEEAIVADAGKEEAEVRAAMGVEQD-----------GKFSMTSLLWHGGSVWD 49
MVP +QAEEAIVAD+ +E EV MGV GKFSM +LLWHGGSVWD
Sbjct: 1 MVPR-EQAEEAIVADSNGKEEEV-GVMGVSAGEHGADDHHGGGGKFSMKNLLWHGGSVWD 58
Query: 50 AWFSCASNQVAQVLLTLPYSFXXXXXXXXXXXXVFYGLMGSWTAYLISVLYVEYRARKEK 109
AWFSCASNQVAQVLLTLPYSF +FYG MGSWTAYLISVLYVEYR+RKEK
Sbjct: 59 AWFSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEK 118
Query: 110 EGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDK 169
EGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDK
Sbjct: 119 EGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDK 178
Query: 170 RTWTYIFGACCSTTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAAVHGQVDGVTHSGPS 229
RTWTYIFGACC+TTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAA ++GQ +G+TH+GP+
Sbjct: 179 RTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALLNGQAEGITHTGPT 238
Query: 230 KMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLVATLYVFTLTLPSASAMYWA 289
K+VLYFTGATNILYTFGGHAVTVEIMHAMWKP KFKYIYL+ATLYVFTLTLPSASAMYWA
Sbjct: 239 KLVLYFTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTLTLPSASAMYWA 298
Query: 290 FGDALLTHSNAFSLLPRSGWRDAAVILMLIHQFITFGFACTPLYFVWEKAIGMHGTRSVL 349
FGD LLTHSNAFSLLP++GWRDAAVILMLIHQFITFGFACTPLYFVWEK IGMH T+S+
Sbjct: 299 FGDELLTHSNAFSLLPKTGWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSIC 358
Query: 350 TRALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLSHILTYRSASARLNA 409
RALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIP+L+HILTYR+ASAR+NA
Sbjct: 359 LRALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRTASARMNA 418
Query: 410 AEKPPPFLPSWSGMFXXXXXXXXXXXXXXXXXXXXXSVTNFIKQIDTFGLFAKCYQCPPR 469
AEKPP FLPSW+GMF S+ NFI+QIDTFGLFAKCYQCP
Sbjct: 419 AEKPPFFLPSWTGMFVLNMFIVVWVLVVGFGLGGWASMVNFIRQIDTFGLFAKCYQCPKP 478
Query: 470 AHAGAPLPAP-PRH 482
A A A P P P H
Sbjct: 479 APALAQSPVPLPHH 492
>Os03g0244600 Similar to AUX1-like protein
Length = 524
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/469 (71%), Positives = 382/469 (81%), Gaps = 7/469 (1%)
Query: 5 GDQAEEAIVAD-AGKEEAEVRAAMGVEQDG------KFSMTSLLWHGGSVWDAWFSCASN 57
G A+ ++ + A E V + +EQDG K ++ LLWHGGS +DAWFSCASN
Sbjct: 2 GSAADGSLANEKAPAETVGVGRYVEMEQDGGGPSTAKSRLSGLLWHGGSAYDAWFSCASN 61
Query: 58 QVAQVLLTLPYSFXXXXXXXXXXXXVFYGLMGSWTAYLISVLYVEYRARKEKEGVSFKNH 117
QVAQVLLTLPYSF +FYGL+GSWTAYLIS+LYVEYR RKE+E V F+NH
Sbjct: 62 QVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVDFRNH 121
Query: 118 VIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFG 177
VIQWFEVLDGLLG +W+ GLAFNCTFLLFGSVIQLIACASNIYYIND+LDKRTWTYIFG
Sbjct: 122 VIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFG 181
Query: 178 ACCSTTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAAVHGQVDGVTHSGPSKMVLYFTG 237
ACC+TTVFIPSFHNYRIWSFLGL MTTYTAWYLA+A+ +HGQVDGV HSGP+KMVLYFTG
Sbjct: 182 ACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYLAVASLIHGQVDGVKHSGPTKMVLYFTG 241
Query: 238 ATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLVATLYVFTLTLPSASAMYWAFGDALLTH 297
ATNILYTFGGHAVTVEIMHAMW+PQKFK IYL+ATLYV TLTLPSA+++YWAFGD LLTH
Sbjct: 242 ATNILYTFGGHAVTVEIMHAMWRPQKFKAIYLMATLYVLTLTLPSAASVYWAFGDELLTH 301
Query: 298 SNAFSLLPRSGWRDAAVILMLIHQFITFGFACTPLYFVWEKAIGMHGTRSVLTRALARLP 357
SNA +LLPR+ +RDAAV+LMLIHQFITFGFACTPLYFVWEK IG+H RS+ RA ARLP
Sbjct: 302 SNALALLPRTAFRDAAVVLMLIHQFITFGFACTPLYFVWEKLIGLHDCRSLFKRAAARLP 361
Query: 358 IVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLSHILTYRSASARLNAAEKPPPFL 417
+VVPIWFLAIIFPFFGPINSAVG+LLVSFTVYIIP+L+H++T+RSA AR NA E PP F+
Sbjct: 362 VVVPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPALAHMITFRSAHARENAVEPPPRFV 421
Query: 418 PSWSGMFXXXXXXXXXXXXXXXXXXXXXSVTNFIKQIDTFGLFAKCYQC 466
W+G F S+TNF++QIDTFGLF KCYQC
Sbjct: 422 GRWTGTFIINAFVVAWVLVVGFGFGGWASMTNFVRQIDTFGLFTKCYQC 470
>Os10g0147400 Similar to Auxin influx carrier protein
Length = 547
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/445 (72%), Positives = 368/445 (82%)
Query: 30 EQDGKFSMTSLLWHGGSVWDAWFSCASNQVAQVLLTLPYSFXXXXXXXXXXXXVFYGLMG 89
+ + ++ LLWHGGS +DAWFSCASNQVAQVLLTLPYSF +FYGL+G
Sbjct: 46 KTAARTRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFAQLGMASGLLFQLFYGLLG 105
Query: 90 SWTAYLISVLYVEYRARKEKEGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGS 149
SWTAYLIS+LY+EYR RKE++ V F+NHVIQWFEVLDGLLG +W+ GLAFNCTFLLFGS
Sbjct: 106 SWTAYLISILYLEYRTRKERDKVDFRNHVIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGS 165
Query: 150 VIQLIACASNIYYINDRLDKRTWTYIFGACCSTTVFIPSFHNYRIWSFLGLGMTTYTAWY 209
VIQLI CASNIYYIND LDKRTWTYIFGACC+TTVFIPSFHNYRIWSFLGL MTTYTAWY
Sbjct: 166 VIQLIGCASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWY 225
Query: 210 LAIAAAVHGQVDGVTHSGPSKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYL 269
+A+A+ +HGQV+GV HSGP+ +VLYFTGATNILYTFGGHAVTVEIMHAMW+PQKFK IYL
Sbjct: 226 IAVASLIHGQVEGVAHSGPTSIVLYFTGATNILYTFGGHAVTVEIMHAMWRPQKFKAIYL 285
Query: 270 VATLYVFTLTLPSASAMYWAFGDALLTHSNAFSLLPRSGWRDAAVILMLIHQFITFGFAC 329
+AT+YV TLTLPSASA YWAFGDALLTHSNA +LLPR+ WRDAAV+LMLIHQFITFGFAC
Sbjct: 286 LATVYVLTLTLPSASAAYWAFGDALLTHSNALALLPRTPWRDAAVVLMLIHQFITFGFAC 345
Query: 330 TPLYFVWEKAIGMHGTRSVLTRALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVY 389
TPLYFVWEK +G+HG S+ RA ARLP+V+PIWFLAIIFPFFGPINSAVG+LLVSFTVY
Sbjct: 346 TPLYFVWEKLVGLHGCPSLCKRAAARLPVVLPIWFLAIIFPFFGPINSAVGSLLVSFTVY 405
Query: 390 IIPSLSHILTYRSASARLNAAEKPPPFLPSWSGMFXXXXXXXXXXXXXXXXXXXXXSVTN 449
IIPSL++++T+RS +R NA E+PP F W+G + S+TN
Sbjct: 406 IIPSLAYMVTFRSPQSRQNAVERPPRFAGGWTGAYVINSFVVAWVLVVGFGFGGWASITN 465
Query: 450 FIKQIDTFGLFAKCYQCPPRAHAGA 474
F+ Q+DTFGLFAKCYQCPP A A
Sbjct: 466 FVHQVDTFGLFAKCYQCPPHPAAAA 490
>Os11g0169200 Amino acid/polyamine transporter II family protein
Length = 480
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/438 (73%), Positives = 361/438 (82%), Gaps = 2/438 (0%)
Query: 34 KFSMTSLLWHGGSVWDAWFSCASNQVAQVLLTLPYSFXXXXXXXXXXXXVFYGLMGSWTA 93
K +++SL WHGGSV+DAWFSCASNQVAQVLLTLPYSF VFYGLMGSWTA
Sbjct: 42 KLAVSSLFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMASGVAFQVFYGLMGSWTA 101
Query: 94 YLISVLYVEYRARKEKEGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQL 153
YLISVLYVEYR R+E++ V F+NHVIQWFEVLDGLLG +W+ AGL FNCTFLLFGSVIQL
Sbjct: 102 YLISVLYVEYRTRRERDKVDFRNHVIQWFEVLDGLLGRHWRNAGLLFNCTFLLFGSVIQL 161
Query: 154 IACASNIYYINDRLDKRTWTYIFGACCSTTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIA 213
IACASNIYYINDRLDKRTWTYIFGACC+TTVF+PSFHNYR+WSFLGL MT+YTAWYL +A
Sbjct: 162 IACASNIYYINDRLDKRTWTYIFGACCATTVFVPSFHNYRVWSFLGLLMTSYTAWYLTVA 221
Query: 214 AAVHGQVDGVT-HSGPSK-MVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLVA 271
A VHG+VDG +GPSK MVLYFTGATNILYTFGGHAVTVEIMHAMW+P++FK IYL A
Sbjct: 222 AVVHGKVDGAAPRAGPSKTMVLYFTGATNILYTFGGHAVTVEIMHAMWRPRRFKMIYLAA 281
Query: 272 TLYVFTLTLPSASAMYWAFGDALLTHSNAFSLLPRSGWRDAAVILMLIHQFITFGFACTP 331
T YV TLTLPSA+AMYWAFGDALL HSNAF+LLPR+ WRDAAV+LMLIHQFITFGFACTP
Sbjct: 282 TAYVLTLTLPSAAAMYWAFGDALLDHSNAFALLPRTPWRDAAVVLMLIHQFITFGFACTP 341
Query: 332 LYFVWEKAIGMHGTRSVLTRALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYII 391
LYFVWEKAIG+HG VL RA ARLP+V+PIWFLA+IFPFFGPINS VG+ LVSFTVYII
Sbjct: 342 LYFVWEKAIGVHGGAGVLRRAAARLPVVLPIWFLAVIFPFFGPINSTVGSFLVSFTVYII 401
Query: 392 PSLSHILTYRSASARLNAAEKPPPFLPSWSGMFXXXXXXXXXXXXXXXXXXXXXSVTNFI 451
P+++H+ T+ A+AR NA E PP L W G F S NF+
Sbjct: 402 PAMAHMATFAPAAARENAVEPPPRALGGWPGTFAANCFVVAWVLVVGFGFGGWASTVNFV 461
Query: 452 KQIDTFGLFAKCYQCPPR 469
+Q+DTFGLF KCYQCPPR
Sbjct: 462 RQVDTFGLFTKCYQCPPR 479
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.139 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,260,865
Number of extensions: 617667
Number of successful extensions: 2082
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2076
Number of HSP's successfully gapped: 5
Length of query: 482
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 377
Effective length of database: 11,553,331
Effective search space: 4355605787
Effective search space used: 4355605787
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 158 (65.5 bits)