Os03g0244600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AUX1-like protein.
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Os03g0244600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to AUX1-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.35 | 0.295 | 2.93 | -0.242 | 0.0317 | 0.349 | -0.379 | -3.21 | 0.128 | 3.54 | 30.45 | 15 | -- | -- |
| 40.3 | 0.296 | 2.91 | -0.0347 | 0.0377 | 0.0388 | -0.35 | -- | 0.127 | 3.62 | 30.4 | 14 | -- | -- |
| 39.78 | 0.294 | 2.93 | -0.219 | 0.0347 | 0.356 | -- | -3.08 | 0.131 | 4.14 | 30.73 | 14 | -- | -- |
| 40.65 | 0.299 | 2.91 | -0.0326 | 0.0379 | 0.0542 | -- | -- | 0.13 | 4.58 | 30.7 | 10 | -- | -- |
| 39.84 | 0.294 | 2.93 | -0.217 | -- | 0.345 | -- | -3.11 | 0.131 | -- | 30.75 | 14 | -- | -- |
| 40.33 | 0.298 | 2.91 | -0.0333 | 0.0276 | -- | -0.361 | -- | 0.124 | 3.71 | -- | -- | -- | -- |
| 40.72 | 0.299 | 2.91 | -0.0278 | 0.0279 | -- | -- | -- | 0.126 | 4.96 | -- | -- | -- | -- |
| 40.72 | 0.297 | 2.91 | -0.03 | -- | 0.0419 | -- | -- | 0.13 | -- | 30.81 | 7 | -- | -- |
| 40.67 | 0.297 | 2.91 | -- | 0.0366 | 0.0505 | -- | -- | 0.133 | 4.58 | 30.7 | 7 | -- | -- |
| 40.76 | 0.298 | 2.91 | -0.0267 | -- | -- | -- | -- | 0.127 | -- | -- | -- | -- | -- |
| 40.74 | 0.299 | 2.91 | -- | 0.0275 | -- | -- | -- | 0.13 | 5 | -- | -- | -- | -- |
| 40.72 | 0.298 | 2.91 | -- | -- | 0.0514 | -- | -- | 0.134 | -- | 31.21 | 5 | -- | -- |
| 40.78 | 0.298 | 2.91 | -- | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.68 | humidity | 90.0 | 30 | < th | dose independent | rect. | 3 | 2 |
| 3 | 35.79 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 30 | 36.68 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 32 | 36.84 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 2 |
| 72 | 38.31 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 74 | 38.33 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 111 | 38.64 | temperature | 20.0 | 30 | < th | dose independent | rect. | 3 | 1 |
| 142 | 38.73 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 171 | 38.81 | wind | 1.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 177 | 38.83 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 211 | 38.94 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 219 | 38.96 | wind | 3.0 | 30 | < th | dose independent | rect. | 3 | 2 |
| 237 | 39.00 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 22 |
| 241 | 39.02 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 264 | 39.07 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 266 | 39.08 | temperature | 30.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 281 | 39.12 | temperature | 30.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 340 | 39.18 | wind | 3.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 374 | 39.20 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 22 |
| 448 | 39.23 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 2 |
| 461 | 39.23 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 466 | 39.24 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 497 | 39.24 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 499 | 39.24 | wind | 7.0 | 30 | < th | dose dependent | rect. | 3 | 2 |
| 537 | 39.26 | humidity | 80.0 | 30 | > th | dose independent | rect. | 3 | 2 |
| 564 | 39.27 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 565 | 39.27 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 2 |
| 567 | 39.27 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 571 | 39.27 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 575 | 39.27 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 2 |
| 578 | 39.27 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 587 | 39.27 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 2 |
| 588 | 39.27 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 589 | 39.27 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 3 | 2 |
| 591 | 39.27 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 592 | 39.27 | radiation | 1.0 | 30 | < th | dose independent | rect. | 3 | 2 |
| 597 | 39.27 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 608 | 39.27 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 22 |
| 609 | 39.27 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 613 | 39.27 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 2 |
| 628 | 39.28 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 22 |
| 664 | 39.29 | temperature | 30.0 | 30 | > th | dose independent | rect. | 16 | 20 |
| 687 | 39.31 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 22 |
| 695 | 39.31 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 22 |
| 705 | 39.32 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 18 |
| 739 | 39.35 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 854 | 39.38 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 856 | 39.38 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 910 | 39.40 | temperature | 30.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 913 | 39.40 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 946 | 39.41 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 975 | 39.42 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 6 |
| 985 | 39.42 | wind | 7.0 | 30 | < th | dose dependent | rect. | 3 | 5 |