Os11g0169200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter II family protein.
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Os11g0169200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Amino acid/polyamine transporter II family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.57 | 0.545 | 7.49 | 1.88 | 0.363 | -1.57 | -0.126 | -0.912 | 0.85 | 14.7 | 11.09 | 224 | -- | -- |
| 135.05 | 0.541 | 7.48 | 2.02 | 0.367 | -1.6 | -0.323 | -- | 0.889 | 14.8 | 10.67 | 214 | -- | -- |
| 134.59 | 0.54 | 7.49 | 1.87 | 0.364 | -1.58 | -- | -0.979 | 0.847 | 14.6 | 10.69 | 214 | -- | -- |
| 135.33 | 0.542 | 7.48 | 2.01 | 0.373 | -1.6 | -- | -- | 0.887 | 14.3 | 11.14 | 197 | -- | -- |
| 139.57 | 0.55 | 7.51 | 1.79 | -- | -1.23 | -- | -0.954 | 0.797 | -- | 7.903 | 333 | -- | -- |
| 159.21 | 0.592 | 7.52 | 1.66 | 0.195 | -- | 1.01 | -- | 0.665 | 6.49 | -- | -- | -- | -- |
| 161.53 | 0.595 | 7.52 | 1.67 | 0.206 | -- | -- | -- | 0.662 | 7.61 | -- | -- | -- | -- |
| 140.2 | 0.551 | 7.49 | 1.94 | -- | -1.26 | -- | -- | 0.838 | -- | 11.28 | 334 | -- | -- |
| 231.05 | 0.712 | 7.55 | -- | 0.239 | -0.635 | -- | -- | 0.552 | 10.1 | -42.74 | 258 | -- | -- |
| 163.82 | 0.598 | 7.53 | 1.68 | -- | -- | -- | -- | 0.666 | -- | -- | -- | -- | -- |
| 235.35 | 0.718 | 7.56 | -- | 0.222 | -- | -- | -- | 0.476 | 7.09 | -- | -- | -- | -- |
| 226.47 | 0.701 | 7.57 | -- | -- | -0.793 | -- | -- | 0.469 | -- | 27.14 | 8 | -- | -- |
| 237.96 | 0.72 | 7.57 | -- | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.17 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 7 | 133.47 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 8 | 133.50 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 14 | 133.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 15 | 133.99 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 6 |
| 35 | 134.44 | temperature | 30 | 720 | > th | dose independent | rect. | 11 | 3 |
| 38 | 134.50 | temperature | 10 | 270 | > th | dose dependent | sin | 3 | NA |
| 44 | 134.64 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 52 | 134.76 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 58 | 134.93 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 66 | 135.22 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 15 |
| 79 | 135.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 90 | 135.63 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 21 |
| 94 | 135.75 | temperature | 30 | 720 | > th | dose independent | rect. | 16 | 22 |
| 100 | 135.85 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 115 | 135.96 | temperature | 30 | 720 | > th | dose independent | sin | 5 | NA |
| 116 | 135.96 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 7 |
| 138 | 136.08 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 17 |
| 139 | 136.10 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 179 | 136.43 | temperature | 30 | 720 | < th | dose independent | sin | 6 | NA |
| 180 | 136.43 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 14 |
| 181 | 136.43 | temperature | 30 | 720 | < th | dose independent | rect. | 21 | 16 |
| 186 | 136.51 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 17 |
| 188 | 136.54 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 200 | 136.60 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 14 |
| 212 | 136.69 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 228 | 136.78 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 254 | 136.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 257 | 137.01 | temperature | 25 | 90 | > th | dose dependent | sin | 23 | NA |
| 289 | 137.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 290 | 137.22 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 22 |
| 311 | 137.30 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 12 |
| 323 | 137.33 | temperature | 30 | 270 | < th | dose dependent | sin | 5 | NA |
| 333 | 137.37 | temperature | 10 | 10 | > th | dose dependent | sin | 21 | NA |
| 334 | 137.37 | temperature | 25 | 10 | > th | dose dependent | sin | 21 | NA |
| 363 | 137.45 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 11 |
| 388 | 137.54 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 10 |
| 412 | 137.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 413 | 137.57 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 20 |
| 451 | 137.70 | temperature | 30 | 90 | < th | dose independent | rect. | 13 | 23 |
| 472 | 137.72 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 487 | 137.78 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 516 | 137.84 | temperature | 30 | 720 | > th | dose dependent | sin | 6 | NA |
| 552 | 137.97 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 605 | 138.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 646 | 138.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 661 | 138.17 | temperature | 30 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 712 | 138.25 | temperature | 30 | 270 | < th | dose independent | rect. | 4 | 15 |
| 769 | 138.36 | temperature | 30 | 720 | < th | dose independent | rect. | 19 | 19 |
| 788 | 138.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 844 | 138.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 934 | 138.71 | temperature | 30 | 10 | < th | dose dependent | sin | 21 | NA |
| 952 | 138.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 963 | 138.78 | temperature | 30 | 90 | < th | dose dependent | sin | 22 | NA |
| 964 | 138.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 7 |
| 972 | 138.80 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 23 |
| 982 | 138.81 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 983 | 138.81 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |