Os05g0447200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AUX1-like protein.
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Os05g0447200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to AUX1-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.74 | 0.481 | 11.1 | -0.282 | 1.14 | 1.2 | 0.0556 | -1.37 | 0.0808 | 20.5 | 21.71 | 4244 | -- | -- |
| 104.8 | 0.477 | 11.1 | 0.121 | 1.13 | 1.38 | -0.217 | -- | 0.144 | 20.2 | 21.7 | 2924 | -- | -- |
| 102.37 | 0.471 | 11.1 | -0.114 | 1.12 | 1.22 | -- | -1.07 | 0.129 | 20.4 | 21.8 | 3044 | -- | -- |
| 104.15 | 0.475 | 11.1 | 0.188 | 1.14 | 1.3 | -- | -- | 0.205 | 20.5 | 21.7 | 2924 | -- | -- |
| 168.01 | 0.604 | 11.1 | 0.00132 | -- | 1.32 | -- | -0.769 | 0.142 | -- | 21.73 | 2256 | -- | -- |
| 152.65 | 0.579 | 11 | 0.88 | 1.14 | -- | 0.195 | -- | 0.64 | 20.7 | -- | -- | -- | -- |
| 152.75 | 0.579 | 11 | 0.875 | 1.14 | -- | -- | -- | 0.641 | 20.6 | -- | -- | -- | -- |
| 160.72 | 0.59 | 11 | 0.435 | -- | 1.31 | -- | -- | 0.212 | -- | 21.89 | 804 | -- | -- |
| 104.86 | 0.477 | 11.1 | -- | 1.14 | 1.38 | -- | -- | 0.171 | 20.5 | 21.6 | 3019 | -- | -- |
| 226.51 | 0.703 | 11 | 0.872 | -- | -- | -- | -- | 0.631 | -- | -- | -- | -- | -- |
| 172.92 | 0.615 | 11 | -- | 1.14 | -- | -- | -- | 0.543 | 20.7 | -- | -- | -- | -- |
| 164.82 | 0.598 | 11.1 | -- | -- | 1.35 | -- | -- | 0.168 | -- | 21.89 | 824 | -- | -- |
| 246.54 | 0.733 | 11 | -- | -- | -- | -- | -- | 0.534 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.72 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 2 | 92.96 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 15 | 94.64 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 16 | 94.74 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 21 | 94.96 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 46 | 96.09 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 47 | 96.09 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 51 | 96.11 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 53 | 96.11 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 57 | 96.13 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 74 | 96.47 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 83 | 96.57 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 128 | 97.26 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 130 | 97.29 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 145 | 97.38 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 190 | 98.02 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 191 | 98.02 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 212 | 98.09 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 222 | 98.19 | wind | 5 | 43200 | < th | dose independent | sin | 21 | NA |
| 253 | 98.46 | wind | 5 | 43200 | > th | dose independent | sin | 21 | NA |
| 261 | 98.55 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 289 | 98.72 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 311 | 98.89 | wind | 3 | 43200 | > th | dose dependent | sin | 21 | NA |
| 323 | 98.96 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 409 | 99.46 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 11 |
| 494 | 99.83 | radiation | 20 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 519 | 100.00 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 579 | 100.19 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 588 | 100.22 | humidity | 80 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 589 | 100.22 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 615 | 100.30 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 618 | 100.31 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 637 | 100.36 | wind | 9 | 43200 | < th | dose dependent | sin | 21 | NA |
| 639 | 100.37 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 652 | 100.42 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 675 | 100.49 | humidity | 70 | 43200 | < th | dose dependent | rect. | 21 | 14 |
| 680 | 100.51 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 682 | 100.52 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 713 | 100.67 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 732 | 100.72 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 750 | 100.75 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 13 |
| 777 | 100.79 | radiation | 30 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 811 | 100.88 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 896 | 101.07 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 899 | 101.08 | radiation | 20 | 43200 | < th | dose independent | sin | 7 | NA |