Os01g0856500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter II family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0856500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Amino acid/polyamine transporter II family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.52 | 0.389 | 10.9 | 1.37 | 0.439 | -1.58 | -0.189 | -2.26 | 0.587 | 9.74 | 0.5768 | 1446 | -- | -- |
| 69.97 | 0.39 | 10.9 | 1.18 | 0.433 | -1.07 | -0.176 | -- | 0.552 | 9.6 | 1.404 | 1450 | -- | -- |
| 68.64 | 0.386 | 10.9 | 1.36 | 0.438 | -1.59 | -- | -2.26 | 0.584 | 9.75 | 0.5557 | 1446 | -- | -- |
| 70.06 | 0.39 | 10.9 | 1.19 | 0.421 | -1.07 | -- | -- | 0.555 | 9.62 | 1.577 | 1452 | -- | -- |
| 74.75 | 0.403 | 10.9 | 1.33 | -- | -1.72 | -- | -2.15 | 0.596 | -- | 0.617 | 1511 | -- | -- |
| 82.67 | 0.426 | 10.9 | 1.42 | 0.458 | -- | -0.253 | -- | 0.691 | 9.7 | -- | -- | -- | -- |
| 82.91 | 0.426 | 10.9 | 1.41 | 0.459 | -- | -- | -- | 0.691 | 9.72 | -- | -- | -- | -- |
| 75.33 | 0.404 | 10.9 | 1.18 | -- | -1.31 | -- | -- | 0.546 | -- | 1.393 | 1543 | -- | -- |
| 74.78 | 0.403 | 11 | -- | 0.405 | -1.24 | -- | -- | 0.269 | 11.2 | 0.009998 | 47520 | -- | -- |
| 95.44 | 0.457 | 10.9 | 1.41 | -- | -- | -- | -- | 0.691 | -- | -- | -- | -- | -- |
| 135.54 | 0.545 | 10.9 | -- | 0.457 | -- | -- | -- | 0.533 | 9.49 | -- | -- | -- | -- |
| 85.3 | 0.43 | 11 | -- | -- | -1.28 | -- | -- | 0.199 | -- | 0.004463 | 46336 | -- | -- |
| 147.8 | 0.567 | 11 | -- | -- | -- | -- | -- | 0.535 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.91 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 3 | 66.97 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 6 | 67.07 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 15 | 67.27 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 26 | 67.34 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 28 | 67.35 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 48 | 67.49 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 54 | 67.51 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 55 | 67.52 | temperature | 25 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 73 | 67.57 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 81 | 67.60 | temperature | 25 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 86 | 67.61 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 111 | 67.68 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 129 | 67.70 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 153 | 67.77 | temperature | 25 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 155 | 67.78 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 159 | 67.78 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 175 | 67.82 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 176 | 67.82 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 193 | 67.85 | temperature | 25 | 14400 | < th | dose independent | sin | 13 | NA |
| 194 | 67.85 | temperature | 25 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 202 | 67.87 | temperature | 25 | 14400 | > th | dose independent | sin | 13 | NA |
| 216 | 67.89 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 223 | 67.89 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 10 |
| 307 | 68.00 | temperature | 20 | 14400 | > th | dose dependent | sin | 11 | NA |
| 344 | 68.03 | temperature | 25 | 14400 | > th | dose dependent | sin | 16 | NA |
| 346 | 68.03 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 9 |
| 383 | 68.05 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 18 |
| 407 | 68.07 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 503 | 68.13 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 523 | 68.14 | humidity | 90 | 43200 | > th | dose dependent | sin | 16 | NA |
| 568 | 68.18 | temperature | 25 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 582 | 68.19 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 614 | 68.21 | radiation | 1 | 1440 | < th | dose dependent | sin | 17 | NA |
| 620 | 68.22 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 718 | 68.27 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 20 |
| 731 | 68.28 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 792 | 68.30 | humidity | 90 | 43200 | > th | dose dependent | rect. | 15 | 20 |
| 861 | 68.33 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 21 |
| 864 | 68.33 | temperature | 25 | 14400 | > th | dose independent | rect. | 5 | 22 |
| 887 | 68.33 | temperature | 25 | 14400 | > th | dose dependent | rect. | 23 | 20 |
| 904 | 68.34 | temperature | 25 | 14400 | > th | dose independent | no | NA | NA |
| 909 | 68.34 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 925 | 68.34 | temperature | 25 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 968 | 68.35 | temperature | 25 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 970 | 68.35 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 986 | 68.36 | temperature | 25 | 14400 | < th | dose independent | no | NA | NA |