BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0856500 Os01g0856500|AK100090
(492 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0856500 Amino acid/polyamine transporter II family pro... 941 0.0
Os05g0447200 Similar to AUX1-like protein 810 0.0
Os03g0244600 Similar to AUX1-like protein 723 0.0
Os10g0147400 Similar to Auxin influx carrier protein 707 0.0
Os11g0169200 Amino acid/polyamine transporter II family pro... 677 0.0
>Os01g0856500 Amino acid/polyamine transporter II family protein
Length = 492
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/492 (94%), Positives = 464/492 (94%)
Query: 1 MVPREQAEEAIVADSNGKEEEVGVMGVSXXXXXXXXXXXXXXKFSMKNLLWHGGSVWDAW 60
MVPREQAEEAIVADSNGKEEEVGVMGVS KFSMKNLLWHGGSVWDAW
Sbjct: 1 MVPREQAEEAIVADSNGKEEEVGVMGVSAGEHGADDHHGGGGKFSMKNLLWHGGSVWDAW 60
Query: 61 FSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEKEG 120
FSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEKEG
Sbjct: 61 FSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEKEG 120
Query: 121 VSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRT 180
VSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRT
Sbjct: 121 VSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRT 180
Query: 181 WTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALLNGQAEGITHTGPTKL 240
WTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALLNGQAEGITHTGPTKL
Sbjct: 181 WTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALLNGQAEGITHTGPTKL 240
Query: 241 VLYFTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTLTLPSASAMYWAFG 300
VLYFTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTLTLPSASAMYWAFG
Sbjct: 241 VLYFTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTLTLPSASAMYWAFG 300
Query: 301 DELLTHSNAFSLLPKTGWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLR 360
DELLTHSNAFSLLPKTGWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLR
Sbjct: 301 DELLTHSNAFSLLPKTGWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLR 360
Query: 361 ALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRTASARMNAAE 420
ALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRTASARMNAAE
Sbjct: 361 ALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRTASARMNAAE 420
Query: 421 KPPFFLPSWTGMFVLNMFIXXXXXXXXXXXXXXASMVNFIRQIDTFGLFAKCYQCPKPAP 480
KPPFFLPSWTGMFVLNMFI ASMVNFIRQIDTFGLFAKCYQCPKPAP
Sbjct: 421 KPPFFLPSWTGMFVLNMFIVVWVLVVGFGLGGWASMVNFIRQIDTFGLFAKCYQCPKPAP 480
Query: 481 ALAQSPVPLPHH 492
ALAQSPVPLPHH
Sbjct: 481 ALAQSPVPLPHH 492
>Os05g0447200 Similar to AUX1-like protein
Length = 482
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/494 (82%), Positives = 436/494 (88%), Gaps = 14/494 (2%)
Query: 1 MVPR-EQAEEAIVADSNGKEEEV-GVMGVSXXXXXXXXXXXXXXKFSMKNLLWHGGSVWD 58
MVP +QAEEAIVAD+ +E EV MGV KFSM +LLWHGGSVWD
Sbjct: 1 MVPAGDQAEEAIVADAGKEEAEVRAAMGVEQDG-----------KFSMTSLLWHGGSVWD 49
Query: 59 AWFSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEK 118
AWFSCASNQVAQVLLTLPYSFSQLGMLSG+LLQ+FYG MGSWTAYLISVLYVEYR+RKEK
Sbjct: 50 AWFSCASNQVAQVLLTLPYSFSQLGMLSGLLLQVFYGLMGSWTAYLISVLYVEYRARKEK 109
Query: 119 EGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDK 178
EGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDK
Sbjct: 110 EGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDK 169
Query: 179 RTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALLNGQAEGITHTGPT 238
RTWTYIFGACC+TTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAA ++GQ +G+TH+GP+
Sbjct: 170 RTWTYIFGACCSTTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAAVHGQVDGVTHSGPS 229
Query: 239 KLVLYFTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTLTLPSASAMYWA 298
K+VLYFTGATNILYTFGGHAVTVEIMHAMWKP KFKYIYL+ATLYVFTLTLPSASAMYWA
Sbjct: 230 KMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLVATLYVFTLTLPSASAMYWA 289
Query: 299 FGDELLTHSNAFSLLPKTGWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSIC 358
FGD LLTHSNAFSLLP++GWRDAAVILMLIHQFITFGFACTPLYFVWEK IGMH T+S+
Sbjct: 290 FGDALLTHSNAFSLLPRSGWRDAAVILMLIHQFITFGFACTPLYFVWEKAIGMHGTRSVL 349
Query: 359 LRALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRTASARMNA 418
RALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIP+L+HILTYR+ASAR+NA
Sbjct: 350 TRALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLSHILTYRSASARLNA 409
Query: 419 AEKPPFFLPSWTGMFVLNMFIXXXXXXXXXXXXXXASMVNFIRQIDTFGLFAKCYQCPKP 478
AEKPP FLPSW+GMFV+N+F+ AS+ NFI+QIDTFGLFAKCYQCP
Sbjct: 410 AEKPPPFLPSWSGMFVVNVFVVAWVLVVGFGLGGWASVTNFIKQIDTFGLFAKCYQCPPR 469
Query: 479 APALAQSPVPLPHH 492
A A A P P P H
Sbjct: 470 AHAGAPLPAP-PRH 482
>Os03g0244600 Similar to AUX1-like protein
Length = 524
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/470 (73%), Positives = 393/470 (83%), Gaps = 2/470 (0%)
Query: 6 QAEEAIVADSNGKEEEVGVMGVSXXXXXXXXXXXXXXKFSMKNLLWHGGSVWDAWFSCAS 65
A + +A+ E VGV K + LLWHGGS +DAWFSCAS
Sbjct: 3 SAADGSLANEKAPAETVGVG--RYVEMEQDGGGPSTAKSRLSGLLWHGGSAYDAWFSCAS 60
Query: 66 NQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEKEGVSFKN 125
NQVAQVLLTLPYSFSQLGMLSG+L QLFYG +GSWTAYLIS+LYVEYR+RKE+E V F+N
Sbjct: 61 NQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVDFRN 120
Query: 126 HVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIF 185
HVIQWFEVLDGLLG +W+ GLAFNCTFLLFGSVIQLIACASNIYYIND+LDKRTWTYIF
Sbjct: 121 HVIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIF 180
Query: 186 GACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALLNGQAEGITHTGPTKLVLYFT 245
GACCATTVFIPSFHNYRIWSFLGL MTTYTAWYLA+A+L++GQ +G+ H+GPTK+VLYFT
Sbjct: 181 GACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYLAVASLIHGQVDGVKHSGPTKMVLYFT 240
Query: 246 GATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTLTLPSASAMYWAFGDELLT 305
GATNILYTFGGHAVTVEIMHAMW+P KFK IYL+ATLYV TLTLPSA+++YWAFGDELLT
Sbjct: 241 GATNILYTFGGHAVTVEIMHAMWRPQKFKAIYLMATLYVLTLTLPSAASVYWAFGDELLT 300
Query: 306 HSNAFSLLPKTGWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARL 365
HSNA +LLP+T +RDAAV+LMLIHQFITFGFACTPLYFVWEK+IG+HD +S+ RA ARL
Sbjct: 301 HSNALALLPRTAFRDAAVVLMLIHQFITFGFACTPLYFVWEKLIGLHDCRSLFKRAAARL 360
Query: 366 PIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRTASARMNAAEKPPFF 425
P+VVPIWFLAIIFPFFGPINSAVG+LLVSFTVYIIPALAH++T+R+A AR NA E PP F
Sbjct: 361 PVVVPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPALAHMITFRSAHARENAVEPPPRF 420
Query: 426 LPSWTGMFVLNMFIXXXXXXXXXXXXXXASMVNFIRQIDTFGLFAKCYQC 475
+ WTG F++N F+ ASM NF+RQIDTFGLF KCYQC
Sbjct: 421 VGRWTGTFIINAFVVAWVLVVGFGFGGWASMTNFVRQIDTFGLFTKCYQC 470
>Os10g0147400 Similar to Auxin influx carrier protein
Length = 547
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/441 (75%), Positives = 381/441 (86%), Gaps = 1/441 (0%)
Query: 43 KFSMKNLLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTA 102
+ + LLWHGGS +DAWFSCASNQVAQVLLTLPYSF+QLGM SG+L QLFYG +GSWTA
Sbjct: 50 RTRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFAQLGMASGLLFQLFYGLLGSWTA 109
Query: 103 YLISVLYVEYRSRKEKEGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQL 162
YLIS+LY+EYR+RKE++ V F+NHVIQWFEVLDGLLG +W+ GLAFNCTFLLFGSVIQL
Sbjct: 110 YLISILYLEYRTRKERDKVDFRNHVIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGSVIQL 169
Query: 163 IACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIA 222
I CASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MTTYTAWY+A+A
Sbjct: 170 IGCASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYIAVA 229
Query: 223 ALLNGQAEGITHTGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATL 282
+L++GQ EG+ H+GPT +VLYFTGATNILYTFGGHAVTVEIMHAMW+P KFK IYLLAT+
Sbjct: 230 SLIHGQVEGVAHSGPTSIVLYFTGATNILYTFGGHAVTVEIMHAMWRPQKFKAIYLLATV 289
Query: 283 YVFTLTLPSASAMYWAFGDELLTHSNAFSLLPKTGWRDAAVILMLIHQFITFGFACTPLY 342
YV TLTLPSASA YWAFGD LLTHSNA +LLP+T WRDAAV+LMLIHQFITFGFACTPLY
Sbjct: 290 YVLTLTLPSASAAYWAFGDALLTHSNALALLPRTPWRDAAVVLMLIHQFITFGFACTPLY 349
Query: 343 FVWEKVIGMHDTKSICLRALARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPA 402
FVWEK++G+H S+C RA ARLP+V+PIWFLAIIFPFFGPINSAVG+LLVSFTVYIIP+
Sbjct: 350 FVWEKLVGLHGCPSLCKRAAARLPVVLPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPS 409
Query: 403 LAHILTYRTASARMNAAEKPPFFLPSWTGMFVLNMFIXXXXXXXXXXXXXXASMVNFIRQ 462
LA+++T+R+ +R NA E+PP F WTG +V+N F+ AS+ NF+ Q
Sbjct: 410 LAYMVTFRSPQSRQNAVERPPRFAGGWTGAYVINSFVVAWVLVVGFGFGGWASITNFVHQ 469
Query: 463 IDTFGLFAKCYQCPKPAPALA 483
+DTFGLFAKCYQCP P PA A
Sbjct: 470 VDTFGLFAKCYQCP-PHPAAA 489
>Os11g0169200 Amino acid/polyamine transporter II family protein
Length = 480
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/474 (69%), Positives = 373/474 (78%), Gaps = 2/474 (0%)
Query: 5 EQAEEAIVADSNGKEEEVGVMGVSXXXXXXXXXXXXXXKFSMKNLLWHGGSVWDAWFSCA 64
E+ E + + E E K ++ +L WHGGSV+DAWFSCA
Sbjct: 4 EKVETIVAGNYVEMEREGAATAGEGVGGAAAASGRRRGKLAVSSLFWHGGSVYDAWFSCA 63
Query: 65 SNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEKEGVSFK 124
SNQVAQVLLTLPYSFSQLGM SGV Q+FYG MGSWTAYLISVLYVEYR+R+E++ V F+
Sbjct: 64 SNQVAQVLLTLPYSFSQLGMASGVAFQVFYGLMGSWTAYLISVLYVEYRTRRERDKVDFR 123
Query: 125 NHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYI 184
NHVIQWFEVLDGLLG +W+ AGL FNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYI
Sbjct: 124 NHVIQWFEVLDGLLGRHWRNAGLLFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYI 183
Query: 185 FGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALLNGQAEGIT-HTGPTK-LVL 242
FGACCATTVF+PSFHNYR+WSFLGL MT+YTAWYL +AA+++G+ +G GP+K +VL
Sbjct: 184 FGACCATTVFVPSFHNYRVWSFLGLLMTSYTAWYLTVAAVVHGKVDGAAPRAGPSKTMVL 243
Query: 243 YFTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTLTLPSASAMYWAFGDE 302
YFTGATNILYTFGGHAVTVEIMHAMW+P +FK IYL AT YV TLTLPSA+AMYWAFGD
Sbjct: 244 YFTGATNILYTFGGHAVTVEIMHAMWRPRRFKMIYLAATAYVLTLTLPSAAAMYWAFGDA 303
Query: 303 LLTHSNAFSLLPKTGWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRAL 362
LL HSNAF+LLP+T WRDAAV+LMLIHQFITFGFACTPLYFVWEK IG+H + RA
Sbjct: 304 LLDHSNAFALLPRTPWRDAAVVLMLIHQFITFGFACTPLYFVWEKAIGVHGGAGVLRRAA 363
Query: 363 ARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRTASARMNAAEKP 422
ARLP+V+PIWFLA+IFPFFGPINS VG+ LVSFTVYIIPA+AH+ T+ A+AR NA E P
Sbjct: 364 ARLPVVLPIWFLAVIFPFFGPINSTVGSFLVSFTVYIIPAMAHMATFAPAAARENAVEPP 423
Query: 423 PFFLPSWTGMFVLNMFIXXXXXXXXXXXXXXASMVNFIRQIDTFGLFAKCYQCP 476
P L W G F N F+ AS VNF+RQ+DTFGLF KCYQCP
Sbjct: 424 PRALGGWPGTFAANCFVVAWVLVVGFGFGGWASTVNFVRQVDTFGLFTKCYQCP 477
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.328 0.140 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,847,221
Number of extensions: 611345
Number of successful extensions: 1893
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1893
Number of HSP's successfully gapped: 6
Length of query: 492
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 387
Effective length of database: 11,553,331
Effective search space: 4471139097
Effective search space used: 4471139097
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 158 (65.5 bits)