BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0415700 Os05g0415700|AK102449
(531 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0415700 Glycoside hydrolase, family 20 protein 1006 0.0
Os01g0891000 Glycoside hydrolase, family 20 protein 769 0.0
Os05g0115900 Glycoside hydrolase, family 20 protein 543 e-154
Os07g0575500 Glycoside hydrolase, family 20 protein 208 7e-54
Os03g0219400 Glycoside hydrolase, family 20 protein 203 2e-52
>Os05g0415700 Glycoside hydrolase, family 20 protein
Length = 531
Score = 1006 bits (2602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/506 (96%), Positives = 486/506 (96%)
Query: 26 DEGSVVEVWPMPATASKGGQTLHVSRELRMTAEGSKYADGEAILKDAFQRMVTLIELDHV 85
DEGSVVEVWPMPATASKGGQTLHVSRELRMTAEGSKYADGEAILKDAFQRMVTLIELDHV
Sbjct: 26 DEGSVVEVWPMPATASKGGQTLHVSRELRMTAEGSKYADGEAILKDAFQRMVTLIELDHV 85
Query: 86 INGSSQGLPLLAGVNVVVHLPGDELNFGVDESYNLSVPATGSPIYAQIEAQTVFGALHAL 145
INGSSQGLPLLAGVNVVVHLPGDELNFGVDESYNLSVPATGSPIYAQIEAQTVFGALHAL
Sbjct: 86 INGSSQGLPLLAGVNVVVHLPGDELNFGVDESYNLSVPATGSPIYAQIEAQTVFGALHAL 145
Query: 146 ETFSQLCNFDFTSRLIELQSAPWSITDMPRFPYRGLLIDTSRHYLPVPVIKSVIDSMTYS 205
ETFSQLCNFDFTSRLIELQSAPWSITDMPRFPYRGLLIDTSRHYLPVPVIKSVIDSMTYS
Sbjct: 146 ETFSQLCNFDFTSRLIELQSAPWSITDMPRFPYRGLLIDTSRHYLPVPVIKSVIDSMTYS 205
Query: 206 KLNVLHWHIVDEQSFPIEIPSYPKLWNGAYSYSERYTMDDAIDIVQYAERRGVNVLAEID 265
KLNVLHWHIVDEQSFPIEIPSYPKLWNGAYSYSERYTMDDAIDIVQYAERRGVNVLAEID
Sbjct: 206 KLNVLHWHIVDEQSFPIEIPSYPKLWNGAYSYSERYTMDDAIDIVQYAERRGVNVLAEID 265
Query: 266 VPGHALSWGVGYPSLWPSATCKEPLDVSSESTFQVINGILSDFSXXXXXXXXHLGGDEVN 325
VPGHALSWGVGYPSLWPSATCKEPLDVSSESTFQVINGILSDFS HLGGDEVN
Sbjct: 266 VPGHALSWGVGYPSLWPSATCKEPLDVSSESTFQVINGILSDFSKVFKFKFVHLGGDEVN 325
Query: 326 TSCWTSTPRVKAWLAQHGMKESDAYRYFVLRAQKIAKSHGYEVINWEETFNNFGDKLDRR 385
TSCWTSTPRVKAWLAQHGMKESDAYRYFVLRAQKIAKSHGYEVINWEETFNNFGDKLDRR
Sbjct: 326 TSCWTSTPRVKAWLAQHGMKESDAYRYFVLRAQKIAKSHGYEVINWEETFNNFGDKLDRR 385
Query: 386 TVVHNWLXXXXXXXXXXXXLRCIVSNQDKWYLDHLEVTWDGFYMNEPLRNIKNPAQQKLV 445
TVVHNWL LRCIVSNQDKWYLDHLEVTWDGFYMNEPLRNIKNPAQQKLV
Sbjct: 386 TVVHNWLGGGVAEKVVAAGLRCIVSNQDKWYLDHLEVTWDGFYMNEPLRNIKNPAQQKLV 445
Query: 446 LGGEVCMWAEHIDASDIQQTIWPRAAAAAERLWTPFEKLSKEWEIAALSARLARFRCLLN 505
LGGEVCMWAEHIDASDIQQTIWPRAAAAAERLWTPFEKLSKEWEIAALSARLARFRCLLN
Sbjct: 446 LGGEVCMWAEHIDASDIQQTIWPRAAAAAERLWTPFEKLSKEWEIAALSARLARFRCLLN 505
Query: 506 HRGIAAGPVTGYGRSAPAEPSSCIKQ 531
HRGIAAGPVTGYGRSAPAEPSSCIKQ
Sbjct: 506 HRGIAAGPVTGYGRSAPAEPSSCIKQ 531
>Os01g0891000 Glycoside hydrolase, family 20 protein
Length = 526
Score = 769 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/501 (71%), Positives = 415/501 (82%), Gaps = 2/501 (0%)
Query: 31 VEVWPMPATASKGGQTLHVSRELRMTAEGSKYADGEAILKDAFQRMVTLIELDHVINGSS 90
+++WPMP + S G Q L+VS+++ M+ EGS Y DG+ ILKDAFQR+V L++L+HV++G++
Sbjct: 28 IDLWPMPTSVSHGTQRLYVSKDITMSMEGSTYPDGKGILKDAFQRVVDLMKLNHVVDGAN 87
Query: 91 QGLPLLAGVNVVVHLPGDELNFGVDESYNLSVPATGSPIYAQIEAQTVFGALHALETFSQ 150
+L GVNVVVH P DEL FGVDESYNLSVP G P+ QIEAQTVFGALHAL+TFSQ
Sbjct: 88 PSSFVLTGVNVVVHSPEDELKFGVDESYNLSVPTAGYPLRVQIEAQTVFGALHALQTFSQ 147
Query: 151 LCNFDFTSRLIELQSAPWSITDMPRFPYRGLLIDTSRHYLPVPVIKSVIDSMTYSKLNVL 210
LC FDFTS+LIEL SAPW I+D PRFPYRGLLIDTSRHYLPV VIK VID+M YSKLNVL
Sbjct: 148 LCYFDFTSKLIELISAPWRISDTPRFPYRGLLIDTSRHYLPVTVIKKVIDTMAYSKLNVL 207
Query: 211 HWHIVDEQSFPIEIPSYPKLWNGAYSYSERYTMDDAIDIVQYAERRGVNVLAEIDVPGHA 270
HWHIVD QSFPIEIPSYPKLWNG+YS+SERYT DA+DIV+YAE RGVNV+AEIDVPGHA
Sbjct: 208 HWHIVDAQSFPIEIPSYPKLWNGSYSFSERYTTSDAVDIVRYAENRGVNVMAEIDVPGHA 267
Query: 271 LSWGVGYPSLWPSATCKEPLDVSSESTFQVINGILSDFSXXXXXXXXHLGGDEVNTSCWT 330
LSWGVGYPSLWPS +CKEPLDVS+ TF VI+GILSDFS HLGGDEVNTSCWT
Sbjct: 268 LSWGVGYPSLWPSDSCKEPLDVSNNFTFGVIDGILSDFSKVFKFKFVHLGGDEVNTSCWT 327
Query: 331 STPRVKAWLAQHGMKESDAYRYFVLRAQKIAKSHGYEVINWEETFNNFGDKLDRRTVVHN 390
+TP +K WL + M SDAYRYFVLR+QK+A SHGY+VINWEETFNNFGDKLDRRTVVHN
Sbjct: 328 ATPHIKKWLDDNQMNVSDAYRYFVLRSQKLAISHGYDVINWEETFNNFGDKLDRRTVVHN 387
Query: 391 WLXXXXXXXXXXXXLRCIVSNQDKWYLDHLEVTWDGFYMNEPLRNIKNPAQQKLVLGGEV 450
WL LRCIVSNQDKWYLDHL+ TW+GFY NEPL+ I +P QQ LV+GGEV
Sbjct: 388 WLGEDVAPKVVAAGLRCIVSNQDKWYLDHLDATWEGFYTNEPLKGIDDPEQQSLVIGGEV 447
Query: 451 CMWAEHIDASDIQQTIWPRAAAAAERLWTPFEKLSKEWEIAALSARLARFRCLLNHRGIA 510
CMW E IDASDI+QTIWPRAAAAAERLWTP EK++++ + +++RLARFRCLLN RG+A
Sbjct: 448 CMWGEQIDASDIEQTIWPRAAAAAERLWTPIEKIAEDPRL--VTSRLARFRCLLNQRGVA 505
Query: 511 AGPVTGYGRSAPAEPSSCIKQ 531
A PV GYGR+AP EP C++Q
Sbjct: 506 AAPVAGYGRTAPYEPGPCVRQ 526
>Os05g0115900 Glycoside hydrolase, family 20 protein
Length = 541
Score = 543 bits (1398), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/511 (54%), Positives = 345/511 (67%), Gaps = 10/511 (1%)
Query: 28 GSVVEVWPMPATASKGGQTLHVSRELRMTAEGSKYADGEAILKDAFQRMVTLI--ELDHV 85
G V +WP+P + G +TL V +L + +G A + +AF+R +L+ H
Sbjct: 34 GEPVYLWPLPRNFTSGSRTLLVDPDLAL--DGQGPGGAAAAVAEAFERYRSLVFSPWAHA 91
Query: 86 INGSSQGLPLLAGVNVVVHLPGDELNFGVDESYNLSVPATGSPIY----AQIEAQTVFGA 141
+S G + + VVV ++L GVDESY + V A G A IEA T++GA
Sbjct: 92 ARNASGGYDV-GKLTVVVASADEKLELGVDESYTIYVAAAGGVNSIVGGATIEANTIYGA 150
Query: 142 LHALETFSQLCNFDFTSRLIELQSAPWSITDMPRFPYRGLLIDTSRHYLPVPVIKSVIDS 201
+ LETFSQLC F++ ++ +E++ APW I D PRF +RGLL+DTSRH+LPV VIK VIDS
Sbjct: 151 IRGLETFSQLCVFNYDTKNVEVRHAPWYIEDEPRFAFRGLLLDTSRHFLPVDVIKQVIDS 210
Query: 202 MTYSKLNVLHWHIVDEQSFPIEIPSYPKLWNGAYSYSERYTMDDAIDIVQYAERRGVNVL 261
M++SKLNVLHWHI+DEQSFP+E+PSYPKLW G+YS ERYT++DA DIV YA +RG++V+
Sbjct: 211 MSFSKLNVLHWHIIDEQSFPLEVPSYPKLWKGSYSKLERYTVEDARDIVSYARKRGIHVM 270
Query: 262 AEIDVPGHALSWGVGYPSLWPSATCKEPLDVSSESTFQVINGILSDFSXXXXXXXXHLGG 321
AEIDVPGHA SWG GYP LWPS C+EPLDV+S TF+VI+GILSD HLGG
Sbjct: 271 AEIDVPGHAESWGKGYPKLWPSPKCREPLDVTSNFTFEVISGILSDMRKIFPFGLFHLGG 330
Query: 322 DEVNTSCWTSTPRVKAWLAQHGMKESDAYRYFVLRAQKIAKSHGYEVINWEETFNNFGDK 381
DEV T CW +TP VK WL + M DAY+YFVL+AQ+IA + + +NWEETFN+F +
Sbjct: 331 DEVYTGCWNATPHVKQWLHERNMTTKDAYKYFVLKAQEIAINLNWIPVNWEETFNSFKEN 390
Query: 382 LDRRTVVHNWLXXXXXXXXXXXXLRCIVSNQDKWYLDHLEVTWDGFYMNEPLRNIKNPAQ 441
L+ TVVHNWL RCI+SNQ WYLDHL+V W FY +EPL I N AQ
Sbjct: 391 LNPLTVVHNWLGPGVCPKVVEKGFRCIMSNQGVWYLDHLDVPWQDFYTSEPLAGINNTAQ 450
Query: 442 QKLVLGGEVCMWAEHIDASDIQQTIWPRAAAAAERLWTPFEKLSKEWEIAALSARLARFR 501
QKLVLGGEVCMW E D SD+QQTIWPRAAAAAER+W+ E +S + + ARL FR
Sbjct: 451 QKLVLGGEVCMWGETADTSDVQQTIWPRAAAAAERMWSQLEAISAQDLETTVLARLHYFR 510
Query: 502 CLLNHRGIAAGPVTG-YGRSAPAEPSSCIKQ 531
CLLNHRGIAA PVT Y R P P SC Q
Sbjct: 511 CLLNHRGIAAAPVTNSYARRPPIGPGSCFIQ 541
>Os07g0575500 Glycoside hydrolase, family 20 protein
Length = 706
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 215/465 (46%), Gaps = 60/465 (12%)
Query: 103 VHLPGDELNFGVDESYNLSVPATGSPIYAQIEAQTVFGALHALETFSQLCNFDFTSRLIE 162
+H P L GVDESY L + + A + A T +GA+ LETFSQL + R +
Sbjct: 120 LHAP---LQHGVDESYALEI--LPAGAAATVTAATAWGAMRGLETFSQLAWWCGRERAV- 173
Query: 163 LQSAPWSITDMPRFPYRGLLIDTSRHYLPVPVIKSVIDSMTYSKLNVLHWHIVDEQSFPI 222
L +A + D P +P+RGL++DT R Y PV I ID+M +K+NV HWHI D QSFP+
Sbjct: 174 LVAAGVRVEDRPLYPHRGLMLDTGRTYFPVADILRTIDAMAANKMNVFHWHITDSQSFPL 233
Query: 223 EIPSYPKLW-NGAYSYSERYTMDDAIDIVQYAERRGVNVLAEIDVPGHALSWGVGYPSL- 280
E+PS P L G+Y RYT+DD IV +A RGV V+ EID PGH SW YP L
Sbjct: 234 ELPSEPALAEKGSYGDGMRYTVDDVKLIVDFAMNRGVRVVPEIDTPGHTASWAGAYPELV 293
Query: 281 -------------WPSATCKEP----LDVSSESTFQVINGILSDFSXXXXXXXXHLGGDE 323
WPS EP L+ T+QV++ +++D + H G DE
Sbjct: 294 SCAGEFWLPDASDWPSRLAAEPGAGQLNPLEPKTYQVMSNVINDVTSLFPDGFYHAGADE 353
Query: 324 VNTSCWTSTPRVKAWLAQHGMKESDAYRYFVLRAQKIAKSHGYEVINWEETFNNFGDKLD 383
V CW + P ++ +LA+ G S FV A + S + WE+ + +
Sbjct: 354 VTPGCWNADPSIQRYLARGGTL-SRLLEKFVGAAHPLIVSRNRTAVYWEDVLLDQAVNVT 412
Query: 384 ------RRTVVHNWLXXXXXXXX-XXXXLRCIVSNQDKWYLD--HLEVTWDGFYMNEPLR 434
T++ W R IVS+ +YLD H + + ++P
Sbjct: 413 ASAIPPETTILQTWNNGGNNTRLIVRAGYRAIVSSASFYYLDCGHGDFAGNDSAYDDPRS 472
Query: 435 NIKNPA-------------------------QQKLVLGGEVCMWAEHIDASDIQQTIWPR 469
+ + +LV+GGEV MW E +DA+ + +WPR
Sbjct: 473 DYGTSGGSWCGPYKTWQRVYDYDVAGGLTAEEARLVVGGEVAMWTEQVDAAVLDGRVWPR 532
Query: 470 AAAAAERLWTPFEKLSKEWEIAALSARLARFRCLLNHRGIAAGPV 514
A+A AE LW+ + A + RL +R + RG+ A P+
Sbjct: 533 ASAMAEALWSGNRDATGRKRYAEATDRLTDWRHRMVGRGVRAEPI 577
>Os03g0219400 Glycoside hydrolase, family 20 protein
Length = 605
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/487 (32%), Positives = 226/487 (46%), Gaps = 83/487 (17%)
Query: 99 VNVVVHLPGDELNFGVDESYNLSV-PATGSPIYAQIEAQTVFGALHALETFSQLCNFDFT 157
+ + V P L VDESY LSV P +GS A I A T +GA+ LETFSQL
Sbjct: 115 LTLSVSDPDVPLGPAVDESYTLSVLPDSGS---ADISAATPWGAIRGLETFSQLAWAGGG 171
Query: 158 SRLIELQSAP--WSITDMPRFPYRGLLIDTSRHYLPVPVIKSVIDSMTYSKLNVLHWHIV 215
+ P I+D P F +RG+L+DT+R++ PV I + +M ++KLNV HWHI
Sbjct: 172 AASGGQPIVPSGIEISDRPHFTHRGILLDTARNFYPVRDILHTLRAMAFNKLNVFHWHIT 231
Query: 216 DEQSFPIEIPSYPKLWN-GAYSYSERYTMDDAIDIVQYAERRGVNVLAEIDVPGHALSWG 274
D QSFPI +P+ P L N G+YS + RYT +D IV +A G+ V+ EID+PGH SW
Sbjct: 232 DAQSFPIVLPTVPNLANSGSYSPTMRYTENDVRHIVSFAASFGIRVIPEIDMPGHTGSWA 291
Query: 275 VGYPSL-------WP----SATCKEP----LDVSSESTFQVINGILSDFSXXXXXXXXHL 319
YP + W A EP L+ + T++V +L D H
Sbjct: 292 GAYPEIVTCANRFWAPHAEPALAAEPGTGQLNPLNPKTYRVAQDVLRDMVALFPDPYLHG 351
Query: 320 GGDEVNTSCWTSTPRVKAWLAQHGMKES------DAYRYFVLRAQKIAKSHGYEVINWEE 373
G DEVNT+CW P V+ +LA+ G + +A R FV AQ++ ++ V+ WE+
Sbjct: 352 GADEVNTACWEDDPVVRRFLAEGGTHDHLLELFINATRPFV--AQELNRT----VVYWED 405
Query: 374 TFNNFGDKLD--------RRTVVHNWLX-XXXXXXXXXXXLRCIVSNQDKWYLDHLE--- 421
G K+ T++ W R IVS+ +YLD
Sbjct: 406 VL--LGPKVTVGPTILPRETTILQTWNDGPENTKRVVAAGYRAIVSSASYYYLDCGHGGW 463
Query: 422 ----------------------------------VTWDGFYMNEPLRNIKNPAQQKLVLG 447
TW Y + L + + + +LVLG
Sbjct: 464 VGNDSRYDKQEKEREGTPLFNDPGGTGGSWCAPFKTWQRVYDYDILHGLTD-DEAQLVLG 522
Query: 448 GEVCMWAEHIDASDIQQTIWPRAAAAAERLWTPFEKLSKEWEIAALSARLARFRCLLNHR 507
GEV +W+E D + + +WPRAAAAAE LW+ + + + A + RL +R + R
Sbjct: 523 GEVALWSEQSDETVLDARLWPRAAAAAETLWSGNKGSNGKKRYANATDRLNDWRHRMVER 582
Query: 508 GIAAGPV 514
GI A P+
Sbjct: 583 GIRAEPI 589
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,886,773
Number of extensions: 735362
Number of successful extensions: 1431
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1422
Number of HSP's successfully gapped: 5
Length of query: 531
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 425
Effective length of database: 11,501,117
Effective search space: 4887974725
Effective search space used: 4887974725
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)