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Os05g0115900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycoside hydrolase, family 20 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.69 (0.0177) R2 : 0.0634
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.207 (0.0372) R2dN8 : 0.0819 R2N8 : 0.0634
σ : 0.333
deviance : 50.76
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.8 0.269 9.67 -0.301 0.396 -0.325 0.204 -2.57 0.223 21.8 0.02335 4768 -- --
35.24 0.276 9.69 -0.273 0.385 -0.622 0.139 -- 0.228 21.8 2.5 2250 -- --
32.94 0.267 9.67 -0.312 0.395 -0.328 -- -2.57 0.221 21.8 0.4239 4839 -- --
35.31 0.277 9.69 -0.285 0.388 -0.626 -- -- 0.232 21.8 4.493 2260 -- --
42.12 0.302 9.65 -0.286 -- -0.269 -- -2.38 0.22 -- 0.769 4839 -- --
40.69 0.299 9.7 -0.0954 0.401 -- 0.226 -- 0.196 22 -- -- -- --
40.89 0.299 9.7 -0.104 0.4 -- -- -- 0.195 22 -- -- -- --
44.14 0.309 9.7 -0.31 -- -0.668 -- -- 0.222 -- 4.043 2087 -- --
37.18 0.284 9.69 -- 0.388 -0.494 -- -- 0.254 21.8 4.767 2260 -- --
50.5 0.332 9.69 -0.0995 -- -- -- -- 0.196 -- -- -- -- --
41.17 0.3 9.7 -- 0.4 -- -- -- 0.207 21.9 -- -- -- --
46.06 0.316 9.69 -- -- -0.555 -- -- 0.241 -- 4.935 1995 -- --
50.76 0.333 9.69 -- -- -- -- -- 0.207 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.07 humidity 90.0 43200 < th dose independent rect. 23 2
2 30.17 humidity 80.0 43200 > th dose dependent rect. 18 8
3 30.29 humidity 90.0 43200 < th dose independent rect. 21 6
6 30.31 humidity 90.0 43200 < th dose independent rect. 22 4
8 30.35 humidity 90.0 43200 < th dose independent rect. 20 8
10 30.37 humidity 80.0 43200 > th dose dependent rect. 19 6
26 30.70 humidity 90.0 43200 > th dose independent rect. 23 3
27 30.71 humidity 90.0 43200 > th dose independent rect. 22 5
31 30.73 humidity 60.0 14400 < th dose independent rect. 15 1
34 30.74 humidity 90.0 43200 > th dose independent rect. 20 9
45 30.81 humidity 60.0 14400 > th dose independent rect. 15 1
50 30.86 humidity 80.0 43200 > th dose dependent sin 14 NA
53 30.90 humidity 80.0 43200 < th dose dependent rect. 22 11
56 30.92 humidity 80.0 43200 > th dose dependent rect. 22 1
58 30.93 humidity 80.0 43200 > th dose dependent rect. 20 4
72 31.02 humidity 90.0 43200 > th dose dependent rect. 24 1
75 31.03 humidity 90.0 43200 > th dose dependent rect. 24 3
99 31.14 wind 3.0 14400 < th dose dependent rect. 2 2
112 31.21 humidity 70.0 14400 < th dose dependent rect. 15 2
114 31.22 wind 9.0 43200 < th dose independent rect. 13 2
120 31.24 wind 1.0 43200 < th dose dependent rect. 18 11
122 31.25 wind 1.0 43200 > th dose independent rect. 16 1
124 31.25 radiation 1.0 1440 < th dose dependent rect. 7 10
130 31.28 atmosphere 995.0 43200 > th dose independent sin 18 NA
146 31.34 atmosphere 995.0 43200 > th dose independent rect. 12 1
147 31.34 atmosphere 995.0 43200 > th dose independent rect. 11 14
153 31.35 atmosphere 995.0 43200 < th dose independent rect. 12 13
154 31.36 atmosphere 995.0 43200 < th dose independent sin 18 NA
161 31.38 wind 7.0 43200 > th dose dependent rect. 14 1
163 31.39 atmosphere 995.0 43200 > th dose independent rect. 12 12
184 31.45 radiation 40.0 43200 < th dose independent rect. 14 19
192 31.48 atmosphere 995.0 43200 < th dose independent rect. 11 15
199 31.50 humidity 90.0 43200 < th dose independent sin 12 NA
223 31.60 atmosphere 995.0 43200 < th dose dependent rect. 13 3
230 31.63 wind 9.0 43200 > th dose independent rect. 13 2
234 31.64 atmosphere 995.0 43200 < th dose independent rect. 10 5
235 31.64 wind 1.0 43200 < th dose independent rect. 19 9
239 31.65 atmosphere 995.0 43200 < th dose dependent rect. 14 1
267 31.72 atmosphere 995.0 43200 > th dose independent rect. 13 10
270 31.72 wind 1.0 43200 < th dose dependent rect. 21 8
279 31.74 atmosphere 995.0 43200 < th dose dependent rect. 12 5
285 31.76 atmosphere 995.0 43200 > th dose independent rect. 8 7
289 31.76 radiation 40.0 43200 > th dose dependent rect. 10 1
291 31.77 radiation 40.0 43200 < th dose independent rect. 14 3
312 31.78 precipitation 0.1 14400 > th dose dependent rect. 3 2
321 31.79 radiation 40.0 43200 < th dose dependent rect. 22 8
363 31.83 radiation 1.0 43200 > th dose dependent rect. 5 1
391 31.86 radiation 20.0 43200 < th dose dependent rect. 4 2
426 31.89 radiation 40.0 43200 > th dose dependent rect. 14 19
457 31.94 humidity 60.0 14400 > th dose independent rect. 14 18
535 32.02 radiation 40.0 43200 > th dose dependent rect. 8 3
565 32.05 humidity 90.0 43200 > th dose independent sin 12 NA
570 32.05 radiation 10.0 43200 > th dose dependent rect. 17 14
576 32.06 humidity 80.0 43200 > th dose independent rect. 3 4
619 32.11 humidity 80.0 43200 < th dose dependent rect. 22 1
622 32.12 wind 1.0 43200 < th dose independent rect. 1 1
632 32.13 wind 1.0 43200 < th dose independent rect. 16 1
665 32.15 wind 3.0 43200 < th dose dependent rect. 16 1
667 32.16 humidity 80.0 14400 > th dose independent rect. 17 1
681 32.17 humidity 80.0 43200 > th dose independent rect. 3 1
703 32.19 wind 7.0 43200 > th dose independent rect. 12 5
713 32.20 humidity 60.0 14400 < th dose independent rect. 14 18
714 32.20 atmosphere 995.0 43200 > th dose independent rect. 12 22
726 32.21 atmosphere 995.0 43200 > th dose independent rect. 14 23
727 32.21 humidity 60.0 43200 < th dose dependent rect. 18 1
756 32.22 radiation 40.0 43200 > th dose dependent rect. 14 1
770 32.23 wind 1.0 43200 < th dose dependent rect. 7 1
777 32.24 humidity 60.0 14400 < th dose independent rect. 14 8
791 32.24 radiation 10.0 43200 < th dose independent rect. 18 14
828 32.26 precipitation 0.1 14400 > th dose independent rect. 4 2
834 32.26 radiation 20.0 43200 < th dose independent rect. 16 15
841 32.27 humidity 80.0 43200 < th dose independent rect. 3 1
847 32.27 humidity 50.0 14400 > th dose dependent rect. 16 2
852 32.28 precipitation 0.1 14400 < th dose independent rect. 3 2
861 32.28 precipitation 0.1 14400 < th dose dependent rect. 3 2
872 32.29 radiation 40.0 43200 > th dose dependent sin 11 NA
885 32.30 radiation 10.0 43200 < th dose independent rect. 23 9
896 32.31 radiation 40.0 43200 < th dose independent rect. 8 1
898 32.31 radiation 10.0 43200 < th dose independent rect. 4 4
929 32.32 atmosphere 995.0 43200 > th dose independent rect. 23 20
932 32.32 atmosphere 995.0 43200 > th dose independent rect. 1 22
999 32.34 precipitation 0.1 4320 > th dose dependent rect. 13 4