Os01g0891000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 20 protein.
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Os01g0891000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 20 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.04 | 0.542 | 3.13 | -0.272 | 0.0621 | 1.82 | 0.438 | -7.47 | 0.111 | 17.4 | 30.1 | 45 | -- | -- |
| 133.81 | 0.539 | 3.1 | -0.0111 | 0.0437 | 0.913 | 0.42 | -- | 0.104 | 17.1 | 30.06 | 62 | -- | -- |
| 133.27 | 0.538 | 3.13 | -0.303 | 0.0879 | 1.95 | -- | -8.07 | 0.116 | 20.2 | 30.1 | 44 | -- | -- |
| 134.01 | 0.539 | 3.1 | -0.00313 | 0.0814 | 0.947 | -- | -- | 0.122 | 19.6 | 29.97 | 62 | -- | -- |
| 133.68 | 0.538 | 3.13 | -0.276 | -- | 1.88 | -- | -7.36 | 0.114 | -- | 30.1 | 45 | -- | -- |
| 141.55 | 0.558 | 3.11 | 0.0447 | 0.175 | -- | 0.685 | -- | 0.0711 | 17.1 | -- | -- | -- | -- |
| 142.68 | 0.559 | 3.11 | 0.0445 | 0.183 | -- | -- | -- | 0.0741 | 17.8 | -- | -- | -- | -- |
| 134.31 | 0.54 | 3.1 | -0.0197 | -- | 0.979 | -- | -- | 0.113 | -- | 29.88 | 55 | -- | -- |
| 133.95 | 0.539 | 3.1 | -- | 0.0811 | 0.957 | -- | -- | 0.117 | 20.4 | 29.9 | 55 | -- | -- |
| 144.42 | 0.562 | 3.11 | 0.0388 | -- | -- | -- | -- | 0.0698 | -- | -- | -- | -- | -- |
| 142.73 | 0.559 | 3.11 | -- | 0.183 | -- | -- | -- | 0.0692 | 17.8 | -- | -- | -- | -- |
| 134.32 | 0.54 | 3.1 | -- | -- | 0.978 | -- | -- | 0.115 | -- | 29.9 | 55 | -- | -- |
| 144.46 | 0.561 | 3.11 | -- | -- | -- | -- | -- | 0.0655 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.11 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 2 | 129.07 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 11 | 129.18 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 16 | 129.41 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 19 | 129.41 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 23 | 129.41 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 29 | 129.41 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 30 | 129.41 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 50 | 129.41 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 55 | 129.46 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 17 | 19 |
| 56 | 129.50 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 58 | 129.75 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 59 | 129.81 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 61 | 129.85 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 64 | 130.02 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 78 | 130.04 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 84 | 130.14 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 85 | 130.15 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 88 | 130.24 | wind | 7.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 90 | 130.28 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 94 | 130.35 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 96 | 130.35 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 97 | 130.35 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 101 | 130.35 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 103 | 130.35 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 108 | 130.35 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 109 | 130.35 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 110 | 130.35 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 115 | 130.35 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 116 | 130.41 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 117 | 130.43 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 119 | 130.48 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 133 | 130.58 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 136 | 130.66 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 138 | 130.79 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 141 | 131.05 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 148 | 131.20 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 151 | 131.28 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 153 | 131.40 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 154 | 131.48 | wind | 3.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 155 | 131.52 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 158 | 131.65 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 159 | 131.65 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 17 | 18 |
| 161 | 131.67 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 162 | 131.68 | radiation | 10.0 | 10 | > th | dose independent | rect. | 17 | 14 |
| 169 | 131.70 | wind | 7.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 173 | 131.76 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 174 | 131.76 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 176 | 131.77 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 178 | 131.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 180 | 131.79 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 181 | 131.79 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 184 | 131.79 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 186 | 131.79 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 188 | 131.79 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 193 | 131.79 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 194 | 131.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 195 | 131.79 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 196 | 131.79 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 201 | 131.79 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 204 | 131.80 | radiation | 10.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 250 | 131.85 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 252 | 131.85 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 253 | 131.85 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 254 | 131.86 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 256 | 131.86 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 259 | 131.88 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 293 | 131.97 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 295 | 131.97 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 298 | 131.97 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 302 | 131.97 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 311 | 131.97 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 312 | 131.97 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 332 | 131.97 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 352 | 132.03 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 365 | 132.11 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 17 | 21 |
| 400 | 132.33 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 11 | 7 |
| 404 | 132.39 | humidity | 50.0 | 10 | < th | dose independent | rect. | 17 | 22 |
| 408 | 132.43 | humidity | 60.0 | 10 | < th | dose independent | rect. | 17 | 1 |
| 410 | 132.45 | temperature | 30.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 417 | 132.48 | humidity | 50.0 | 10 | < th | dose independent | rect. | 17 | 19 |
| 509 | 132.99 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 550 | 133.26 | temperature | 30.0 | 30 | > th | dose dependent | no | NA | NA |
| 661 | 133.31 | wind | 1.0 | 30 | < th | dose independent | rect. | 9 | 18 |
| 717 | 133.45 | temperature | 30.0 | 90 | > th | dose independent | rect. | 16 | 1 |
| 846 | 133.62 | temperature | 30.0 | 90 | > th | dose dependent | sin | 9 | NA |
| 851 | 133.69 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 852 | 133.69 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 884 | 133.72 | temperature | 30.0 | 30 | > th | dose dependent | sin | 22 | NA |
| 885 | 133.73 | humidity | 50.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 892 | 133.76 | temperature | 30.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 893 | 133.78 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 899 | 133.81 | wind | 1.0 | 30 | < th | dose independent | rect. | 11 | 16 |
| 902 | 133.82 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 12 | 5 |
| 963 | 133.94 | humidity | 50.0 | 90 | < th | dose independent | rect. | 12 | 5 |
| 992 | 134.01 | humidity | 50.0 | 90 | < th | dose independent | sin | 4 | NA |
| 993 | 134.01 | humidity | 50.0 | 10 | < th | dose dependent | sin | 9 | NA |