BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0891000 Os01g0891000|AK070632
(526 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0891000 Glycoside hydrolase, family 20 protein 1045 0.0
Os05g0415700 Glycoside hydrolase, family 20 protein 788 0.0
Os05g0115900 Glycoside hydrolase, family 20 protein 561 e-160
Os07g0575500 Glycoside hydrolase, family 20 protein 231 8e-61
Os03g0219400 Glycoside hydrolase, family 20 protein 228 1e-59
>Os01g0891000 Glycoside hydrolase, family 20 protein
Length = 526
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/511 (98%), Positives = 503/511 (98%)
Query: 16 IQSCIAIELTDHIDLWPMPTSVSHGTQRLYVSKDITMSMEGSTYPDGKGILKDAFQRVVD 75
IQSCIAIELTDHIDLWPMPTSVSHGTQRLYVSKDITMSMEGSTYPDGKGILKDAFQRVVD
Sbjct: 16 IQSCIAIELTDHIDLWPMPTSVSHGTQRLYVSKDITMSMEGSTYPDGKGILKDAFQRVVD 75
Query: 76 LMKLNHVVDGANPSSFVLTGVNVVVHSPEDELKFGVDESYNLSVPTAGYPLRVQIEAQTV 135
LMKLNHVVDGANPSSFVLTGVNVVVHSPEDELKFGVDESYNLSVPTAGYPLRVQIEAQTV
Sbjct: 76 LMKLNHVVDGANPSSFVLTGVNVVVHSPEDELKFGVDESYNLSVPTAGYPLRVQIEAQTV 135
Query: 136 FGALHALQTFSQLCYFDFTSKLIELISAPWRISDTPRFPYRGLLIDTSRHYLPVTVIKKV 195
FGALHALQTFSQLCYFDFTSKLIELISAPWRISDTPRFPYRGLLIDTSRHYLPVTVIKKV
Sbjct: 136 FGALHALQTFSQLCYFDFTSKLIELISAPWRISDTPRFPYRGLLIDTSRHYLPVTVIKKV 195
Query: 196 IDTMAYSKLNVLHWHIVDAQSFPIEIPSYPKLWNGSYSFSERYTTSDAVDIVRYAENRGV 255
IDTMAYSKLNVLHWHIVDAQSFPIEIPSYPKLWNGSYSFSERYTTSDAVDIVRYAENRGV
Sbjct: 196 IDTMAYSKLNVLHWHIVDAQSFPIEIPSYPKLWNGSYSFSERYTTSDAVDIVRYAENRGV 255
Query: 256 NVMAEIDVPGHALSWGVGYPSLWPSDSCKEPLDVSNNFTFGVIDGILSDFSXXXXXXXXH 315
NVMAEIDVPGHALSWGVGYPSLWPSDSCKEPLDVSNNFTFGVIDGILSDFS H
Sbjct: 256 NVMAEIDVPGHALSWGVGYPSLWPSDSCKEPLDVSNNFTFGVIDGILSDFSKVFKFKFVH 315
Query: 316 LGGDEVNTSCWTATPHIKKWLDDNQMNVSDAYRYFVLRSQKLAISHGYDVINWEETFNNF 375
LGGDEVNTSCWTATPHIKKWLDDNQMNVSDAYRYFVLRSQKLAISHGYDVINWEETFNNF
Sbjct: 316 LGGDEVNTSCWTATPHIKKWLDDNQMNVSDAYRYFVLRSQKLAISHGYDVINWEETFNNF 375
Query: 376 GDKLDRRTVVHNWLGEDVAPKVVAAGLRCIVSNQDKWYLDHLDATWEGFYTNEPLKGIDD 435
GDKLDRRTVVHNWLGEDVAPKVVAAGLRCIVSNQDKWYLDHLDATWEGFYTNEPLKGIDD
Sbjct: 376 GDKLDRRTVVHNWLGEDVAPKVVAAGLRCIVSNQDKWYLDHLDATWEGFYTNEPLKGIDD 435
Query: 436 PEQQSLVIGGEVCMWGEQIDASDIEQTIWPRAAAAAERLWTPIEKIAEDPRLVTSRLARF 495
PEQQSLVIGGEVCMWGEQIDASDIEQTIWPRAAAAAERLWTPIEKIAEDPRLVTSRLARF
Sbjct: 436 PEQQSLVIGGEVCMWGEQIDASDIEQTIWPRAAAAAERLWTPIEKIAEDPRLVTSRLARF 495
Query: 496 RCLLNQRGVAAAPVAGYGRTAPYEPGPCVRQ 526
RCLLNQRGVAAAPVAGYGRTAPYEPGPCVRQ
Sbjct: 496 RCLLNQRGVAAAPVAGYGRTAPYEPGPCVRQ 526
>Os05g0415700 Glycoside hydrolase, family 20 protein
Length = 531
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/501 (73%), Positives = 424/501 (84%), Gaps = 2/501 (0%)
Query: 28 IDLWPMPTSVSHGTQRLYVSKDITMSMEGSTYPDGKGILKDAFQRVVDLMKLNHVVDGAN 87
+++WPMP + S G Q L+VS+++ M+ EGS Y DG+ ILKDAFQR+V L++L+HV++G++
Sbjct: 31 VEVWPMPATASKGGQTLHVSRELRMTAEGSKYADGEAILKDAFQRMVTLIELDHVINGSS 90
Query: 88 PSSFVLTGVNVVVHSPEDELKFGVDESYNLSVPTAGYPLRVQIEAQTVFGALHALQTFSQ 147
+L GVNVVVH P DEL FGVDESYNLSVP G P+ QIEAQTVFGALHAL+TFSQ
Sbjct: 91 QGLPLLAGVNVVVHLPGDELNFGVDESYNLSVPATGSPIYAQIEAQTVFGALHALETFSQ 150
Query: 148 LCYFDFTSKLIELISAPWRISDTPRFPYRGLLIDTSRHYLPVTVIKKVIDTMAYSKLNVL 207
LC FDFTS+LIEL SAPW I+D PRFPYRGLLIDTSRHYLPV VIK VID+M YSKLNVL
Sbjct: 151 LCNFDFTSRLIELQSAPWSITDMPRFPYRGLLIDTSRHYLPVPVIKSVIDSMTYSKLNVL 210
Query: 208 HWHIVDAQSFPIEIPSYPKLWNGSYSFSERYTTSDAVDIVRYAENRGVNVMAEIDVPGHA 267
HWHIVD QSFPIEIPSYPKLWNG+YS+SERYT DA+DIV+YAE RGVNV+AEIDVPGHA
Sbjct: 211 HWHIVDEQSFPIEIPSYPKLWNGAYSYSERYTMDDAIDIVQYAERRGVNVLAEIDVPGHA 270
Query: 268 LSWGVGYPSLWPSDSCKEPLDVSNNFTFGVIDGILSDFSXXXXXXXXHLGGDEVNTSCWT 327
LSWGVGYPSLWPS +CKEPLDVS+ TF VI+GILSDFS HLGGDEVNTSCWT
Sbjct: 271 LSWGVGYPSLWPSATCKEPLDVSSESTFQVINGILSDFSKVFKFKFVHLGGDEVNTSCWT 330
Query: 328 ATPHIKKWLDDNQMNVSDAYRYFVLRSQKLAISHGYDVINWEETFNNFGDKLDRRTVVHN 387
+TP +K WL + M SDAYRYFVLR+QK+A SHGY+VINWEETFNNFGDKLDRRTVVHN
Sbjct: 331 STPRVKAWLAQHGMKESDAYRYFVLRAQKIAKSHGYEVINWEETFNNFGDKLDRRTVVHN 390
Query: 388 WLGEDVAPKVVAAGLRCIVSNQDKWYLDHLDATWEGFYTNEPLKGIDDPEQQSLVIGGEV 447
WLG VA KVVAAGLRCIVSNQDKWYLDHL+ TW+GFY NEPL+ I +P QQ LV+GGEV
Sbjct: 391 WLGGGVAEKVVAAGLRCIVSNQDKWYLDHLEVTWDGFYMNEPLRNIKNPAQQKLVLGGEV 450
Query: 448 CMWGEQIDASDIEQTIWPRAAAAAERLWTPIEKIAEDPRL--VTSRLARFRCLLNQRGVA 505
CMW E IDASDI+QTIWPRAAAAAERLWTP EK++++ + +++RLARFRCLLN RG+A
Sbjct: 451 CMWAEHIDASDIQQTIWPRAAAAAERLWTPFEKLSKEWEIAALSARLARFRCLLNHRGIA 510
Query: 506 AAPVAGYGRTAPYEPGPCVRQ 526
A PV GYGR+AP EP C++Q
Sbjct: 511 AGPVTGYGRSAPAEPSSCIKQ 531
>Os05g0115900 Glycoside hydrolase, family 20 protein
Length = 541
Score = 561 bits (1446), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/504 (54%), Positives = 348/504 (69%), Gaps = 8/504 (1%)
Query: 30 LWPMPTSVSHGTQRLYVSKDITMSMEGSTYPDGKGILKDAFQRVVDLMKLNHVVDGANPS 89
LWP+P + + G++ L V D+ + +G R + H A+
Sbjct: 39 LWPLPRNFTSGSRTLLVDPDLALDGQGPGGAAAAVAEAFERYRSLVFSPWAHAARNAS-G 97
Query: 90 SFVLTGVNVVVHSPEDELKFGVDESYNLSVPTAGYPLRV----QIEAQTVFGALHALQTF 145
+ + + VVV S +++L+ GVDESY + V AG + IEA T++GA+ L+TF
Sbjct: 98 GYDVGKLTVVVASADEKLELGVDESYTIYVAAAGGVNSIVGGATIEANTIYGAIRGLETF 157
Query: 146 SQLCYFDFTSKLIELISAPWRISDTPRFPYRGLLIDTSRHYLPVTVIKKVIDTMAYSKLN 205
SQLC F++ +K +E+ APW I D PRF +RGLL+DTSRH+LPV VIK+VID+M++SKLN
Sbjct: 158 SQLCVFNYDTKNVEVRHAPWYIEDEPRFAFRGLLLDTSRHFLPVDVIKQVIDSMSFSKLN 217
Query: 206 VLHWHIVDAQSFPIEIPSYPKLWNGSYSFSERYTTSDAVDIVRYAENRGVNVMAEIDVPG 265
VLHWHI+D QSFP+E+PSYPKLW GSYS ERYT DA DIV YA RG++VMAEIDVPG
Sbjct: 218 VLHWHIIDEQSFPLEVPSYPKLWKGSYSKLERYTVEDARDIVSYARKRGIHVMAEIDVPG 277
Query: 266 HALSWGVGYPSLWPSDSCKEPLDVSNNFTFGVIDGILSDFSXXXXXXXXHLGGDEVNTSC 325
HA SWG GYP LWPS C+EPLDV++NFTF VI GILSD HLGGDEV T C
Sbjct: 278 HAESWGKGYPKLWPSPKCREPLDVTSNFTFEVISGILSDMRKIFPFGLFHLGGDEVYTGC 337
Query: 326 WTATPHIKKWLDDNQMNVSDAYRYFVLRSQKLAISHGYDVINWEETFNNFGDKLDRRTVV 385
W ATPH+K+WL + M DAY+YFVL++Q++AI+ + +NWEETFN+F + L+ TVV
Sbjct: 338 WNATPHVKQWLHERNMTTKDAYKYFVLKAQEIAINLNWIPVNWEETFNSFKENLNPLTVV 397
Query: 386 HNWLGEDVAPKVVAAGLRCIVSNQDKWYLDHLDATWEGFYTNEPLKGIDDPEQQSLVIGG 445
HNWLG V PKVV G RCI+SNQ WYLDHLD W+ FYT+EPL GI++ QQ LV+GG
Sbjct: 398 HNWLGPGVCPKVVEKGFRCIMSNQGVWYLDHLDVPWQDFYTSEPLAGINNTAQQKLVLGG 457
Query: 446 EVCMWGEQIDASDIEQTIWPRAAAAAERLWTPIEKI-AED-PRLVTSRLARFRCLLNQRG 503
EVCMWGE D SD++QTIWPRAAAAAER+W+ +E I A+D V +RL FRCLLN RG
Sbjct: 458 EVCMWGETADTSDVQQTIWPRAAAAAERMWSQLEAISAQDLETTVLARLHYFRCLLNHRG 517
Query: 504 VAAAPVAG-YGRTAPYEPGPCVRQ 526
+AAAPV Y R P PG C Q
Sbjct: 518 IAAAPVTNSYARRPPIGPGSCFIQ 541
>Os07g0575500 Glycoside hydrolase, family 20 protein
Length = 706
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 177/554 (31%), Positives = 252/554 (45%), Gaps = 81/554 (14%)
Query: 28 IDLWPMPTSVSHGTQRLYVSKDITMSMEGSTYPDGKGILKDAFQRVVDLMKLNHVVDGAN 87
+++WP PTS+S + V + + P G L A +R L+
Sbjct: 33 VNVWPKPTSMSWAEPHMAVRVSSSFHV---VAPSGNAHLLSAARRYAALLLAERYRPLVT 89
Query: 88 PSSFV---------------LTGVNVVVHSPEDELKFGVDESYNLSV-PTAGYPLRVQIE 131
P+ V L + + V L+ GVDESY L + P +
Sbjct: 90 PAVNVTAGGAGAGAAGRGAELGYLTLAVSDLHAPLQHGVDESYALEILPAG---AAATVT 146
Query: 132 AQTVFGALHALQTFSQLCYFDFTSKLIELISAPWRISDTPRFPYRGLLIDTSRHYLPVTV 191
A T +GA+ L+TFSQL ++ + + L++A R+ D P +P+RGL++DT R Y PV
Sbjct: 147 AATAWGAMRGLETFSQLAWWCGRERAV-LVAAGVRVEDRPLYPHRGLMLDTGRTYFPVAD 205
Query: 192 IKKVIDTMAYSKLNVLHWHIVDAQSFPIEIPSYPKLW-NGSYSFSERYTTSDAVDIVRYA 250
I + ID MA +K+NV HWHI D+QSFP+E+PS P L GSY RYT D IV +A
Sbjct: 206 ILRTIDAMAANKMNVFHWHITDSQSFPLELPSEPALAEKGSYGDGMRYTVDDVKLIVDFA 265
Query: 251 ENRGVNVMAEIDVPGHALSWGVGYPSL--------------WPSDSCKEP----LDVSNN 292
NRGV V+ EID PGH SW YP L WPS EP L+
Sbjct: 266 MNRGVRVVPEIDTPGHTASWAGAYPELVSCAGEFWLPDASDWPSRLAAEPGAGQLNPLEP 325
Query: 293 FTFGVIDGILSDFSXXXXXXXXHLGGDEVNTSCWTATPHIKKWLDDNQMNVSDAYRYFVL 352
T+ V+ +++D + H G DEV CW A P I+++L +S FV
Sbjct: 326 KTYQVMSNVINDVTSLFPDGFYHAGADEVTPGCWNADPSIQRYLARGG-TLSRLLEKFVG 384
Query: 353 RSQKLAISHGYDVINWEETFNNFGDKLD------RRTVVHNW-LGEDVAPKVVAAGLRCI 405
+ L +S + WE+ + + T++ W G + +V AG R I
Sbjct: 385 AAHPLIVSRNRTAVYWEDVLLDQAVNVTASAIPPETTILQTWNNGGNNTRLIVRAGYRAI 444
Query: 406 VSNQDKWYLD--HLD--------------------------ATWEGFYTNEPLKGIDDPE 437
VS+ +YLD H D TW+ Y + G+ E
Sbjct: 445 VSSASFYYLDCGHGDFAGNDSAYDDPRSDYGTSGGSWCGPYKTWQRVYDYDVAGGL-TAE 503
Query: 438 QQSLVIGGEVCMWGEQIDASDIEQTIWPRAAAAAERLWTPIEKIAEDPRL--VTSRLARF 495
+ LV+GGEV MW EQ+DA+ ++ +WPRA+A AE LW+ R T RL +
Sbjct: 504 EARLVVGGEVAMWTEQVDAAVLDGRVWPRASAMAEALWSGNRDATGRKRYAEATDRLTDW 563
Query: 496 RCLLNQRGVAAAPV 509
R + RGV A P+
Sbjct: 564 RHRMVGRGVRAEPI 577
>Os03g0219400 Glycoside hydrolase, family 20 protein
Length = 605
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 183/565 (32%), Positives = 267/565 (47%), Gaps = 96/565 (16%)
Query: 24 LTDHIDLWPMPTSVSHGTQRLYVSKDITMSMEGS-TYPDGKGILKDAFQRVVDLMKLNHV 82
L + +WP PTS+S + +Y + S+ ++P L+ A L++
Sbjct: 42 LAQKVQVWPKPTSISWPSA-VYAPLSPSFSVRAVLSHPS----LRQAVAFYTRLIRAERH 96
Query: 83 VDGANPSSFVLTGVNV-----VVHSPEDELKFGVDESYNLSV-PTAGYPLRVQIEAQTVF 136
P+++ L+ V V V P+ L VDESY LSV P +G I A T +
Sbjct: 97 APLVPPANYTLSRVPVRTLTLSVSDPDVPLGPAVDESYTLSVLPDSG---SADISAATPW 153
Query: 137 GALHALQTFSQLCYFDFTSKLI--ELISAPWRISDTPRFPYRGLLIDTSRHYLPVTVIKK 194
GA+ L+TFSQL + + ++ + ISD P F +RG+L+DT+R++ PV I
Sbjct: 154 GAIRGLETFSQLAWAGGGAASGGQPIVPSGIEISDRPHFTHRGILLDTARNFYPVRDILH 213
Query: 195 VIDTMAYSKLNVLHWHIVDAQSFPIEIPSYPKLWN-GSYSFSERYTTSDAVDIVRYAENR 253
+ MA++KLNV HWHI DAQSFPI +P+ P L N GSYS + RYT +D IV +A +
Sbjct: 214 TLRAMAFNKLNVFHWHITDAQSFPIVLPTVPNLANSGSYSPTMRYTENDVRHIVSFAASF 273
Query: 254 GVNVMAEIDVPGHALSWGVGYPSL-------WPSDS----CKEP----LDVSNNFTFGVI 298
G+ V+ EID+PGH SW YP + W + EP L+ N T+ V
Sbjct: 274 GIRVIPEIDMPGHTGSWAGAYPEIVTCANRFWAPHAEPALAAEPGTGQLNPLNPKTYRVA 333
Query: 299 DGILSDFSXXXXXXXXHLGGDEVNTSCWTATPHIKKWLDDNQMN------VSDAYRYFVL 352
+L D H G DEVNT+CW P ++++L + + +A R FV
Sbjct: 334 QDVLRDMVALFPDPYLHGGADEVNTACWEDDPVVRRFLAEGGTHDHLLELFINATRPFV- 392
Query: 353 RSQKLAISHGYDVINWEETFNNFGDKLD--------RRTVVHNWL-GEDVAPKVVAAGLR 403
+Q+L V+ WE+ G K+ T++ W G + +VVAAG R
Sbjct: 393 -AQEL----NRTVVYWEDVL--LGPKVTVGPTILPRETTILQTWNDGPENTKRVVAAGYR 445
Query: 404 CIVSNQDKWYLDHLDA-------------------------------------TWEGFYT 426
IVS+ +YLD TW+ Y
Sbjct: 446 AIVSSASYYYLDCGHGGWVGNDSRYDKQEKEREGTPLFNDPGGTGGSWCAPFKTWQRVYD 505
Query: 427 NEPLKGIDDPEQQSLVIGGEVCMWGEQIDASDIEQTIWPRAAAAAERLWTPIEKIAEDPR 486
+ L G+ D E Q LV+GGEV +W EQ D + ++ +WPRAAAAAE LW+ + R
Sbjct: 506 YDILHGLTDDEAQ-LVLGGEVALWSEQSDETVLDARLWPRAAAAAETLWSGNKGSNGKKR 564
Query: 487 L--VTSRLARFRCLLNQRGVAAAPV 509
T RL +R + +RG+ A P+
Sbjct: 565 YANATDRLNDWRHRMVERGIRAEPI 589
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,813,619
Number of extensions: 819587
Number of successful extensions: 1634
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1617
Number of HSP's successfully gapped: 6
Length of query: 526
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 421
Effective length of database: 11,553,331
Effective search space: 4863952351
Effective search space used: 4863952351
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)