BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0333200 Os05g0333200|L28001
(390 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0333200 Guanine nucleotide-binding protein alpha-1 sub... 808 0.0
Os06g0111400 Guanine nucleotide binding protein (G-protein)... 197 9e-51
Os11g0206700 Guanine nucleotide binding protein (G-protein)... 194 6e-50
Os10g0117800 Guanine nucleotide binding protein (G-protein)... 188 5e-48
Os12g0593000 Similar to Extra-large G-protein 145 4e-35
>Os05g0333200 Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1)
Length = 390
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/390 (100%), Positives = 390/390 (100%)
Query: 1 MSVLTCVLDNMGSSCSRSHSLSEAETTKNAKSADIDRRILQETKAEQHIHKLLLLGAGES 60
MSVLTCVLDNMGSSCSRSHSLSEAETTKNAKSADIDRRILQETKAEQHIHKLLLLGAGES
Sbjct: 1 MSVLTCVLDNMGSSCSRSHSLSEAETTKNAKSADIDRRILQETKAEQHIHKLLLLGAGES 60
Query: 61 GKSTIFKQIKLLFQTGFDEAELRSYTSVIHANVYQTIKILYEGAKELSQVESDSSKYVIS 120
GKSTIFKQIKLLFQTGFDEAELRSYTSVIHANVYQTIKILYEGAKELSQVESDSSKYVIS
Sbjct: 61 GKSTIFKQIKLLFQTGFDEAELRSYTSVIHANVYQTIKILYEGAKELSQVESDSSKYVIS 120
Query: 121 PDNQEIGEKLSDIDGRLDYPLLNKELVLDVKRLWQDPAIQETYLRGSILQLPDCAQYFME 180
PDNQEIGEKLSDIDGRLDYPLLNKELVLDVKRLWQDPAIQETYLRGSILQLPDCAQYFME
Sbjct: 121 PDNQEIGEKLSDIDGRLDYPLLNKELVLDVKRLWQDPAIQETYLRGSILQLPDCAQYFME 180
Query: 181 NLDRLAEAGYVPTKEDVLYARVRTNGVVQIQFSPVGENKRGGEVYRLYDVGGQRNERRKW 240
NLDRLAEAGYVPTKEDVLYARVRTNGVVQIQFSPVGENKRGGEVYRLYDVGGQRNERRKW
Sbjct: 181 NLDRLAEAGYVPTKEDVLYARVRTNGVVQIQFSPVGENKRGGEVYRLYDVGGQRNERRKW 240
Query: 241 IHLFEGVNAVIFCAAISEYDQMLFEDETKNRMMETKELFDWVLKQRCFEKTSFILFLNKF 300
IHLFEGVNAVIFCAAISEYDQMLFEDETKNRMMETKELFDWVLKQRCFEKTSFILFLNKF
Sbjct: 241 IHLFEGVNAVIFCAAISEYDQMLFEDETKNRMMETKELFDWVLKQRCFEKTSFILFLNKF 300
Query: 301 DIFEKKIQKVPLSVCEWFKDYQPIAPGKQEVEHAYEFVKKKFEELYFQSSKPDRVDRVFK 360
DIFEKKIQKVPLSVCEWFKDYQPIAPGKQEVEHAYEFVKKKFEELYFQSSKPDRVDRVFK
Sbjct: 301 DIFEKKIQKVPLSVCEWFKDYQPIAPGKQEVEHAYEFVKKKFEELYFQSSKPDRVDRVFK 360
Query: 361 IYRTTALDQKLVKKTFKLIDESMRRSREGT 390
IYRTTALDQKLVKKTFKLIDESMRRSREGT
Sbjct: 361 IYRTTALDQKLVKKTFKLIDESMRRSREGT 390
>Os06g0111400 Guanine nucleotide binding protein (G-protein), alpha subunit
family protein
Length = 867
Score = 197 bits (502), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 216/419 (51%), Gaps = 57/419 (13%)
Query: 18 SHSLSEAETTKNAKSADIDRRILQETKAEQHIHKLLLLGAGESGKSTIFKQIKLLFQTGF 77
S + A + + A R + + ++ I KLL+LG+ +G STIFKQ KLL+ T F
Sbjct: 423 SLPVPPANSDEPKDEAPYSARTVPDYLDQKRIQKLLILGSPGAGTSTIFKQAKLLYDTRF 482
Query: 78 DEAELRSYTSVIHANVYQTIKILYEGAKELSQVE-----------------------SDS 114
+ EL S +I +N+++ + IL EG + + SDS
Sbjct: 483 TQEELDSIKLMIQSNMFKYLGILLEGRERFEEEALAGSNNPSSEDENTQHDGNKSNGSDS 542
Query: 115 SKYVISPDNQEIGEKLSDI--DGRLD--YPLLNKELVLDVKRLWQDPAIQETYLRGSILQ 170
Y I+ ++ + L DI G LD +P +E V+ +W+DPAIQ TY R L
Sbjct: 543 CIYSINAKLKKFSDWLLDIIAMGDLDAFFPAATREYAPIVEEMWKDPAIQATYKRKDELH 602
Query: 171 -LPDCAQYFMENLDRLAEAGYVPTKEDVLYAR--VRTNGVVQIQF-----SPVGE----- 217
LPD A+YF+ ++ Y P+++D++YA + NG+ I+F SP+ E
Sbjct: 603 FLPDVAEYFLSRAIEVSSNEYEPSEKDIIYAEGVTQGNGLAFIEFTLDDRSPMSEMYTDN 662
Query: 218 ---NKRGGEVYRLYDVGGQ-RNERRKWIHLFEGVNAVIFCAAISEYDQMLFEDETKN--- 270
+ + Y+L V + NE KW+ +FE V+ VIF A+S+YDQ+ N
Sbjct: 663 HEPHSQTLNKYQLIRVSAKGMNEGCKWVEMFEDVSMVIFSVALSDYDQLGAPSSGGNSPL 722
Query: 271 --RMMETKELFDWVLKQRCFEKTSFILFLNKFDIFEKKIQKVPLSVCEWFKDYQPIAP-- 326
+M+++++LF+ ++Q CF F+L LNKFD+FE+KI +VPLS CEWF D+ P+
Sbjct: 723 VNKMIQSRDLFEATIRQPCFRDMPFVLVLNKFDLFEEKIGRVPLSTCEWFSDFCPLRTHH 782
Query: 327 GKQEVEH-AYEFVKKKFEELYFQSSKPDRVDRVFKIYRTTALDQKLVKKTFKLIDESMR 384
Q + H A+ +V KF+ELY + DR +++ A D+ V + FK I E ++
Sbjct: 783 NNQSLAHQAFYYVAMKFKELYAACT-----DRKLFVWQARARDRLTVDEAFKFIREVLK 836
>Os11g0206700 Guanine nucleotide binding protein (G-protein), alpha subunit
family protein
Length = 856
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 209/399 (52%), Gaps = 57/399 (14%)
Query: 38 RILQETKAEQHIHKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELRSYTSVIHANVYQTI 97
R + + ++ I KLLLLG +G STIFKQ K L+ T F + EL + +I +N+++ +
Sbjct: 431 RTVPDYLDQKRIQKLLLLGPDGAGTSTIFKQAKYLYGTRFTQEELENIKLIIQSNMFKYL 490
Query: 98 KILYEGAK------------------ELSQVE-----SDSSKYVISPDNQEIGEKLSDI- 133
IL EG + E Q E S+S Y I+P ++ + L DI
Sbjct: 491 GILLEGRERFEEEALSRSNCTISEDEETQQDENKANGSNSCIYSINPRLKKFSDWLLDII 550
Query: 134 -DGRLD--YPLLNKELVLDVKRLWQDPAIQETYLRGSILQ-LPDCAQYFMENLDRLAEAG 189
G LD +P +E V +W+DPAIQ TY R L LPD A+YF+ ++
Sbjct: 551 AMGDLDAFFPAATREYAPFVDEMWKDPAIQATYKRKDELHFLPDVAEYFLSRAIEVSSNE 610
Query: 190 YVPTKEDVLYAR--VRTNGVVQIQFS---------PVGENKRGGEV----YRLYDVGGQ- 233
Y P+++DV++A + NG+ I+F+ P EN Y+L V +
Sbjct: 611 YEPSEKDVIFAEGVTQGNGLAFIEFALDDRSPMSEPYIENPEAHSQPLTKYQLIRVSAKG 670
Query: 234 RNERRKWIHLFEGVNAVIFCAAISEYDQM---LFEDETK--NRMMETKELFDWVLKQRCF 288
N+ KW+ +FE V VIF A+S+YDQ+ ++ N+MM++KELF+ ++Q CF
Sbjct: 671 MNDGCKWVEMFEDVRMVIFSVALSDYDQVGPPVYGSSRPLLNKMMQSKELFEATIRQPCF 730
Query: 289 EKTSFILFLNKFDIFEKKIQKVPLSVCEWFKDYQPIAPGKQE---VEHAYEFVKKKFEEL 345
T F+L LNK+D+FE+KI + PL+ CEWF D+ P+ + AY +V KF++L
Sbjct: 731 CDTPFVLVLNKYDLFEEKINRAPLTTCEWFNDFSPVRTHHNNQSLAQQAYYYVAVKFKDL 790
Query: 346 YFQSSKPDRVDRVFKIYRTTALDQKLVKKTFKLIDESMR 384
Y++ + R +++ A D++ V + FK + E +R
Sbjct: 791 YYEHT-----GRKLFVWQARARDRQTVDEAFKYVREILR 824
>Os10g0117800 Guanine nucleotide binding protein (G-protein), alpha subunit
family protein
Length = 440
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 205/395 (51%), Gaps = 52/395 (13%)
Query: 38 RILQETKAEQHIHKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELRSYTSVIHANVYQTI 97
R + E ++ + KLLL+G SG STIFKQ K L+ T F E+ + +I +NVY+ +
Sbjct: 22 RFVPEYLEQKKVQKLLLVGLEGSGSSTIFKQAKFLYGTEFSPEEILNLKLMIQSNVYKYL 81
Query: 98 KILYE----------------------GAKELSQVESDSSKYVISPDNQEIGEKLSDID- 134
L E G E V+S SS Y ++ L +I
Sbjct: 82 STLLEWRECFEDEALEEEKELGMSNHKGDGEPKAVQSTSSLYSLNQRLMHFANWLLEIVA 141
Query: 135 -GRLD--YPLLNKELVLDVKRLWQDPAIQETYLRGSILQ-LPDCAQYFMENLDRLAEAGY 190
G LD +P +E V+ +W+DPAIQ TY R + L LPD A YF++ + ++ Y
Sbjct: 142 LGNLDAFFPAATREYAPIVEEVWKDPAIQATYKRKNELHFLPDVASYFLDRVVEISSNEY 201
Query: 191 VPTKEDVLYARV--RTNGVVQIQFS-----PVGE---NKRGGEV----YRLYDVGGQR-N 235
PT+ D+LYA + NG+ ++FS P+ + +K G Y+L + +
Sbjct: 202 EPTETDILYAEGVNQWNGLSTLEFSLDDRGPLSDSYADKAGNPAIQTKYQLIRMNSKGLT 261
Query: 236 ERRKWIHLFEGVNAVIFCAAISEYDQMLFED--ETKNRMMETKELFDWVLKQRCFEKTSF 293
K + + E + A+IFC ++++YDQ + E N+M+ +++LF+ V++ FE T
Sbjct: 262 GGFKCLGMLEDIRAIIFCISLADYDQTWVQSSGEPCNKMIASRDLFEDVIRHPSFEDTPC 321
Query: 294 ILFLNKFDIFEKKIQKVPLSVCEWFKDYQPIAPGKQE----VEHAYEFVKKKFEELYFQS 349
+L LNK+D FE+KI +VPL+VCEWF D+ P+ P HAY +V KF++LY S
Sbjct: 322 VLLLNKYDAFEEKISRVPLTVCEWFADFSPVRPHHTSQTSLASHAYYYVAVKFKDLY--S 379
Query: 350 SKPDRVDRVFKIYRTTALDQKLVKKTFKLIDESMR 384
S D R +++T AL+++ V F+ I E +R
Sbjct: 380 SVAD--GRKLFVFQTKALERRTVDDAFRYIREVLR 412
>Os12g0593000 Similar to Extra-large G-protein
Length = 686
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 175/349 (50%), Gaps = 50/349 (14%)
Query: 22 SEAETTKNAKSADIDRRILQETKAEQHIHKLLLLGAGESGKSTIFKQIKLLFQT-GFDEA 80
++A + ++ R + + ++ I KLLL+G SG +TI KQ K L+++ F
Sbjct: 247 NKANNQCGEEPVNVVNRPIPDYLEQRTIQKLLLVG---SGTNTILKQAKFLYKSRPFSVE 303
Query: 81 ELRSYTSVIHANVYQTIKILYEG---------AKELSQVESDSS--------------KY 117
E +I +N+Y + IL EG A + +SD S +Y
Sbjct: 304 ECEDLRLIIQSNIYNYLGILLEGRERFEEEAIADRRTTCQSDPSSSGHCEPELCNDITEY 363
Query: 118 VISPDNQEIGEKL--SDIDGRLD--YPLLNKELVLDVKRLWQDPAIQETYLRGSILQ-LP 172
I+P + + + + G L+ +P ++E V+ LW+DPAIQ TY R S L LP
Sbjct: 364 YIAPRLKAFSDWILKAMAIGNLEDIFPAASREYAPMVEELWKDPAIQATYNRRSELPFLP 423
Query: 173 DCAQYFMENLDRLAEAGYVPTKEDVLYAR--VRTNGVVQIQFS--PVGENKRGGE----- 223
A YF++ ++ Y + D+LYA ++G+ FS + + RG +
Sbjct: 424 SAASYFLDKAVDISRTEYELSDMDILYADGITSSDGLASTDFSFPQLALDGRGFDEPDPQ 483
Query: 224 ----VYRLYDVGGQR-NERRKWIHLFEGVNAVIFCAAISEYDQMLFEDETKN---RMMET 275
Y+L + + +E KW+ +F+ V VIFC A+S+YD+ +ED N +MMET
Sbjct: 484 DTLLRYQLIRINNKGLHENCKWLQMFDDVRLVIFCVAVSDYDEY-YEDANGNVVNKMMET 542
Query: 276 KELFDWVLKQRCFEKTSFILFLNKFDIFEKKIQKVPLSVCEWFKDYQPI 324
++LF+ + FE+ F+L L KFDI E+KI K PL+ C+WF D+ P+
Sbjct: 543 RQLFESIALHPIFEQMDFLLLLTKFDILEQKIGKSPLTSCDWFSDFTPL 591
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,181,205
Number of extensions: 493979
Number of successful extensions: 1413
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1395
Number of HSP's successfully gapped: 5
Length of query: 390
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 287
Effective length of database: 11,657,759
Effective search space: 3345776833
Effective search space used: 3345776833
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)