BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0658000 Os04g0658000|AK071255
(344 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0658000 Similar to Possible apospory-associated like p... 671 0.0
AK070482 469 e-132
Os01g0658700 Aldose 1-epimerase family protein 429 e-120
Os02g0176900 Aldose 1-epimerase family protein 406 e-113
Os05g0569400 Aldose 1-epimerase family protein 225 4e-59
Os09g0327400 Aldose 1-epimerase family protein 157 1e-38
Os04g0603000 Aldose 1-epimerase family protein 121 9e-28
Os08g0241500 Aldose 1-epimerase family protein 92 7e-19
>Os04g0658000 Similar to Possible apospory-associated like protein
Length = 344
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 23 QPQQEGPVVTCKGVNGLDKVVLREVRGSSAEVYLYGGHVTSWKDEHGEELLFVSNKAIFK 82
QPQQEGPVVTCKGVNGLDKVVLREVRGSSAEVYLYGGHVTSWKDEHGEELLFVSNKAIFK
Sbjct: 23 QPQQEGPVVTCKGVNGLDKVVLREVRGSSAEVYLYGGHVTSWKDEHGEELLFVSNKAIFK 82
Query: 83 PPKAIRGGIPICFPQFSNFGNLDPHGFARNRTWSVENDPPPFPVPTSNKAYVDLILTHTE 142
PPKAIRGGIPICFPQFSNFGNLDPHGFARNRTWSVENDPPPFPVPTSNKAYVDLILTHTE
Sbjct: 83 PPKAIRGGIPICFPQFSNFGNLDPHGFARNRTWSVENDPPPFPVPTSNKAYVDLILTHTE 142
Query: 143 EDLKIWPHSYEFRLRVALGPGGDLMLTSRIRNTNADGKPFSFTFAYHTYFSISDISEVRV 202
EDLKIWPHSYEFRLRVALGPGGDLMLTSRIRNTNADGKPFSFTFAYHTYFSISDISEVRV
Sbjct: 143 EDLKIWPHSYEFRLRVALGPGGDLMLTSRIRNTNADGKPFSFTFAYHTYFSISDISEVRV 202
Query: 203 EGLETLDYLDNLQERNRYTEQGDAIVFESELDRIYLGTPSKIAIIDHEKKRTFVVRKGGL 262
EGLETLDYLDNLQERNRYTEQGDAIVFESELDRIYLGTPSKIAIIDHEKKRTFVVRKGGL
Sbjct: 203 EGLETLDYLDNLQERNRYTEQGDAIVFESELDRIYLGTPSKIAIIDHEKKRTFVVRKGGL 262
Query: 263 PDAVVWNPWDKKAKAMSDFGDDEYKRMVCVEAAAIEKPITLKPGEEWTGKLELSAVPSSY 322
PDAVVWNPWDKKAKAMSDFGDDEYKRMVCVEAAAIEKPITLKPGEEWTGKLELSAVPSSY
Sbjct: 263 PDAVVWNPWDKKAKAMSDFGDDEYKRMVCVEAAAIEKPITLKPGEEWTGKLELSAVPSSY 322
Query: 323 YSGQLDPDRVLQDSSVPEDSIS 344
YSGQLDPDRVLQDSSVPEDSIS
Sbjct: 323 YSGQLDPDRVLQDSSVPEDSIS 344
>AK070482
Length = 330
Score = 469 bits (1206), Expect = e-132, Method: Compositional matrix adjust.
Identities = 217/281 (77%), Positives = 251/281 (89%)
Query: 54 VYLYGGHVTSWKDEHGEELLFVSNKAIFKPPKAIRGGIPICFPQFSNFGNLDPHGFARNR 113
V+LYGG VTSWK++ G+ELLFVS+KA FKPPKAIRGGIPICFPQF G L+ HGFARNR
Sbjct: 49 VHLYGGQVTSWKNDRGDELLFVSSKATFKPPKAIRGGIPICFPQFGTHGILEKHGFARNR 108
Query: 114 TWSVENDPPPFPVPTSNKAYVDLILTHTEEDLKIWPHSYEFRLRVALGPGGDLMLTSRIR 173
W+++++PPPFP T+ KA+VDLIL +EEDLKIWPHS+EFRLRVALGPGGDL LTSRIR
Sbjct: 109 FWAIDDNPPPFPTSTAAKAFVDLILKTSEEDLKIWPHSFEFRLRVALGPGGDLALTSRIR 168
Query: 174 NTNADGKPFSFTFAYHTYFSISDISEVRVEGLETLDYLDNLQERNRYTEQGDAIVFESEL 233
NTN DG+PFSFTFAYHTYFS+SDISEVR+EGLETLDY+D L+ + R TEQGDAIVFESE+
Sbjct: 169 NTNTDGRPFSFTFAYHTYFSVSDISEVRIEGLETLDYIDCLRGKERSTEQGDAIVFESEV 228
Query: 234 DRIYLGTPSKIAIIDHEKKRTFVVRKGGLPDAVVWNPWDKKAKAMSDFGDDEYKRMVCVE 293
D+IYL P+KIAIIDHEKKRTFV+RK GLPDAV+WNPWDK+ K M DFGD+EYK M+CVE
Sbjct: 229 DKIYLDAPAKIAIIDHEKKRTFVLRKDGLPDAVLWNPWDKRTKNMQDFGDEEYKHMLCVE 288
Query: 294 AAAIEKPITLKPGEEWTGKLELSAVPSSYYSGQLDPDRVLQ 334
AA+EKPITLKPGEEW GK++LSAVPSSY SGQLDP++VLQ
Sbjct: 289 PAAVEKPITLKPGEEWKGKMDLSAVPSSYCSGQLDPNKVLQ 329
>Os01g0658700 Aldose 1-epimerase family protein
Length = 314
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/305 (66%), Positives = 249/305 (81%), Gaps = 4/305 (1%)
Query: 25 QQEGPVVTCKGVNGLDKVVLREVRGSSAEVYLYGGHVTSWKDEHGEELLFVSNKAIFKPP 84
Q+ G VT K NG D+V++R RG+S V L+GG V SW+++ GEELLF S+KAIFKPP
Sbjct: 9 QRPGFEVT-KDWNGADQVMIRSPRGASVLVSLHGGQVVSWRNDRGEELLFTSSKAIFKPP 67
Query: 85 KAIRGGIPICFPQFSNFGNLDPHGFARNRTWSVENDPPPFPVPTSN-KAYVDLILTHTEE 143
KA+RGGIPICFPQF N G L+ HGFARNR W+++++ PP +N K VDL+L +E+
Sbjct: 68 KAMRGGIPICFPQFGNCGTLEQHGFARNRLWAIDDEAPPLNHNDNNGKVSVDLLLKPSED 127
Query: 144 DLKIWPHSYEFRLRVALGPGGDLMLTSRIRNTNADGKPFSFTFAYHTYFSISDISEVRVE 203
DLK WPH +EFRLRV+L GDL L SR+RN N GKPFSF+FAYHTY S+SDISEVR+E
Sbjct: 128 DLKCWPHCFEFRLRVSLSTDGDLSLVSRVRNVN--GKPFSFSFAYHTYLSVSDISEVRIE 185
Query: 204 GLETLDYLDNLQERNRYTEQGDAIVFESELDRIYLGTPSKIAIIDHEKKRTFVVRKGGLP 263
GLETLDYLDNL +R R+TEQGDAI FESE+DR+Y+G+PS IA++DHEKKRTF+VRK GLP
Sbjct: 186 GLETLDYLDNLSQRERFTEQGDAITFESEVDRVYVGSPSVIAVLDHEKKRTFIVRKEGLP 245
Query: 264 DAVVWNPWDKKAKAMSDFGDDEYKRMVCVEAAAIEKPITLKPGEEWTGKLELSAVPSSYY 323
D VVWNPWDKK+K M+DFGD+EYK+M+CV+AAA+E+ ITLKPGEEWTGKLELSAV S+
Sbjct: 246 DVVVWNPWDKKSKTMADFGDEEYKQMLCVDAAAVERAITLKPGEEWTGKLELSAVASTNC 305
Query: 324 SGQLD 328
S LD
Sbjct: 306 SDHLD 310
>Os02g0176900 Aldose 1-epimerase family protein
Length = 304
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/284 (68%), Positives = 228/284 (80%), Gaps = 4/284 (1%)
Query: 35 GVNGLDKVVLREVRGSSAEVYLYGGHVTSWKDEHGEELLFVSNKAIFKPPKAIRGGIPIC 94
G GL+K+VLRE G S +V+LYGG V W++E+ E+LLFVS KA FKPPKAIRGGI IC
Sbjct: 14 GATGLEKLVLREAHGCSVQVFLYGGQVIFWENEYREQLLFVSRKAYFKPPKAIRGGIQIC 73
Query: 95 FPQFSNFGNLDPHGFARNRTWSVENDPPPFPVPTSNKAYVDLILTHTEEDLKIWPHSYEF 154
FPQF N G L+ HGFARNR WSV+ PPPFP TSN ++DLIL + EDLKIWPHS+EF
Sbjct: 74 FPQFGNHGVLEQHGFARNRLWSVDETPPPFPATTSN-CHIDLILKQSPEDLKIWPHSFEF 132
Query: 155 RLRVALGPGGDLMLTSRIRNTNADGKPFSFTFAYHTYFSISDISEVRVEGLETLDYLDNL 214
RLRVAL P GDLMLTSRI+NTNADGKPF F F+Y+TYFS+SDISEVRVEGLETLDY+DNL
Sbjct: 133 RLRVALSPTGDLMLTSRIKNTNADGKPFKFGFSYNTYFSVSDISEVRVEGLETLDYIDNL 192
Query: 215 QERNRYTEQGDAIVFESELDRIYLGTPSKIAIIDHEKKRTFVVRKGGLPDAVVWNPWDKK 274
Q R TEQGDA+VFESE +++YL P KI IIDH+KKRTF +RK GLPD VVWNPWD+K
Sbjct: 193 QCGKRCTEQGDAVVFESEAEKVYLSAPPKIVIIDHDKKRTFELRKEGLPDVVVWNPWDRK 252
Query: 275 AKAMSDFGDDEYKRMVCVEAAAIEKPITLKPGEEWTGKLELSAV 318
AK + DFG++EYK M+CV AA EKPITL+P T +L S++
Sbjct: 253 AKTILDFGEEEYKCMLCVGAANAEKPITLRPA---TARLASSSL 293
>Os05g0569400 Aldose 1-epimerase family protein
Length = 195
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/182 (60%), Positives = 135/182 (74%), Gaps = 9/182 (4%)
Query: 56 LYGGHVTSWKDEHGEELLFVSNKAIFKPPKAIRGGIPICFPQFSNFGNLDPHGFARNRTW 115
L+ G T + + F+ +AIFKPPKA+RGGIPICFPQF N G L+ HGFARNR W
Sbjct: 22 LFHGSFTGFNTQ------FLDVQAIFKPPKAMRGGIPICFPQFGNSGTLEQHGFARNRIW 75
Query: 116 SVENDPPPFPVPTSN-KAYVDLILTHTEEDLKIWPHSYEFRLRVALGPGGDLMLTSRIRN 174
+++ + PP +N KA VDLIL +E+DLK WPH +EFRLRV+L G+L L SRIRN
Sbjct: 76 ALDEEHPPLNQNDNNSKASVDLILKPSEDDLKCWPHGFEFRLRVSLTKDGNLSLVSRIRN 135
Query: 175 TNADGKPFSFTFAYHTYFSISDISEVRVEGLETLDYLDNLQERNRYTEQGDAIVFESELD 234
N GKPFSF+F YHTY S+SDISEVR+EGLETLDYLDNL +R R+TEQGDAI FESE+
Sbjct: 136 VN--GKPFSFSFGYHTYLSVSDISEVRIEGLETLDYLDNLSQRERFTEQGDAITFESEVK 193
Query: 235 RI 236
+
Sbjct: 194 NV 195
>Os09g0327400 Aldose 1-epimerase family protein
Length = 319
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 148/296 (50%), Gaps = 35/296 (11%)
Query: 30 VVTCKGVNGLDKVVLREVRGSSAEVYLYGGHVTSWKDEHGEELLFVSNKAIFKPPKAIRG 89
V +G GL K+ L+ GS AE+YL+G VTSWK G++LLFV A+F K I G
Sbjct: 48 VAVSEGNGGLPKIDLKSPHGSEAEIYLFGACVTSWKVPSGKDLLFVRPDAVFNGQKPISG 107
Query: 90 GIPICFPQFSNFGNLDPHGFARNRTWSV------ENDPPPFPVPTSNKAYVDLILTHTEE 143
GIP CFPQF G + HGFARN WS+ E DP V L L
Sbjct: 108 GIPHCFPQFGP-GTMQQHGFARNMNWSITDSEANEGDPA-----------VTLELKDDSY 155
Query: 144 DLKIWPHSYEFRLRVALGPGGDLMLTSRIRNTNADGKPFSFTFAYHTYF--SISDISEVR 201
+W S++ +VAL L++ ++ TN D KPFSF A H+YF SIS +S
Sbjct: 156 SRSMWDFSFQALYKVAL---HSTSLSTTLKITNTDDKPFSFNSALHSYFSASISGVSVKG 212
Query: 202 VEGLETLDYLDNLQERNRYTEQGDAIVFESELDRIYLGTPSKIAIIDHEKKRTFVVRKGG 261
++G +TL+ + + E+ + + F +D IYLG PS++ +D+ V+
Sbjct: 213 LKGCKTLNKDPDPKNPLEGKEEREEVTFPGFVDCIYLGAPSELT-LDNGLGDKIVISNAN 271
Query: 262 LPDAVVWNPWDKKAKAMSDFGDDEYKRMVCVEAAAIEKPITLKPGEEWTG--KLEL 315
DAV+WNP + YK VCVE A IE + L P + W K+EL
Sbjct: 272 WSDAVLWNPHLQMEAC--------YKDFVCVENAKIET-LQLGPNQSWVAEQKIEL 318
>Os04g0603000 Aldose 1-epimerase family protein
Length = 92
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 62/70 (88%)
Query: 265 AVVWNPWDKKAKAMSDFGDDEYKRMVCVEAAAIEKPITLKPGEEWTGKLELSAVPSSYYS 324
V+WNPWDK+ K M DFGD+EYK M+CVE AA+EKPITLKPGEEW GK++LSAVPSSY S
Sbjct: 22 VVLWNPWDKRTKNMQDFGDEEYKHMLCVEPAAVEKPITLKPGEEWKGKMDLSAVPSSYCS 81
Query: 325 GQLDPDRVLQ 334
GQLDP++VLQ
Sbjct: 82 GQLDPNKVLQ 91
>Os08g0241500 Aldose 1-epimerase family protein
Length = 92
Score = 91.7 bits (226), Expect = 7e-19, Method: Composition-based stats.
Identities = 40/51 (78%), Positives = 45/51 (88%)
Query: 150 HSYEFRLRVALGPGGDLMLTSRIRNTNADGKPFSFTFAYHTYFSISDISEV 200
+S+EFRLRVALGP GDL LTSRIRNTN DG+ FS+TFAYHTYFS+SDI V
Sbjct: 18 YSFEFRLRVALGPNGDLSLTSRIRNTNTDGRSFSYTFAYHTYFSVSDIRYV 68
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,740,260
Number of extensions: 592697
Number of successful extensions: 1189
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1180
Number of HSP's successfully gapped: 8
Length of query: 344
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 242
Effective length of database: 11,709,973
Effective search space: 2833813466
Effective search space used: 2833813466
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)