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Os09g0327400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Aldose 1-epimerase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.2 (0.0278) R2 : 0.821
β1 : -4.19 (0.101) R2dD : 0.701 R2D : 0.439
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.23 (0.106) R2dE : 0.0583 R2E : -0.0996
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.61 (0.0612) R2dN8 : 0.395 R2N8 : 0.0566
σ : 0.515
deviance : 122.49
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 13.08
memory length : 1688
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
115.68 0.505 13.2 -4.23 0.477 -1.02 -0.801 1.24 -1.62 16.3 10 1446 -- --
116.86 0.503 13.2 -4.18 0.268 -0.989 -1.37 -- -1.55 18.5 10.59 1582 -- --
115.62 0.501 13.2 -4.26 0.608 -1.05 -- 1.62 -1.64 14 10.02 1357 -- --
119.75 0.51 13.2 -4.13 0.627 -1.08 -- -- -1.58 14.1 10.03 1367 -- --
121.25 0.513 13.2 -4.27 -- -1.2 -- 1.16 -1.63 -- 19.83 1771 -- --
144.9 0.564 13.1 -4.11 0.477 -- -0.906 -- -1.39 16.1 -- -- -- --
146.37 0.567 13.1 -4.12 0.477 -- -- -- -1.4 15.1 -- -- -- --
122.49 0.515 13.2 -4.19 -- -1.23 -- -- -1.61 -- 13.08 1688 -- --
547.29 1.09 13.2 -- 0.659 -1.07 -- -- -1.4 14.5 10 30172 -- --
159.35 0.59 13.1 -4.14 -- -- -- -- -1.41 -- -- -- -- --
592.69 1.14 13 -- 0.558 -- -- -- -0.941 15.1 -- -- -- --
506.7 1.05 13 -- -- -2.06 -- -- -0.963 -- 94.24 47520 -- --
610.46 1.15 13 -- -- -- -- -- -0.953 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 112.39 radiation 10 1440 < th dose independent rect. 14 17
2 112.84 radiation 10 1440 < th dose independent rect. 15 15
3 112.95 radiation 10 1440 < th dose independent sin 14 NA
8 113.23 radiation 10 1440 < th dose independent rect. 15 4
10 113.23 radiation 10 1440 < th dose independent rect. 15 12
12 113.25 radiation 10 1440 < th dose independent rect. 15 9
15 113.26 radiation 10 1440 < th dose independent rect. 15 7
30 113.80 radiation 10 1440 < th dose independent rect. 15 2
36 114.32 humidity 80 720 > th dose dependent rect. 7 17
38 114.40 radiation 10 1440 < th dose dependent rect. 9 22
42 114.53 humidity 90 1440 < th dose dependent rect. 23 18
44 114.61 humidity 70 1440 > th dose dependent rect. 9 6
49 114.72 humidity 90 1440 < th dose dependent rect. 1 16
61 114.82 humidity 90 1440 < th dose dependent rect. 5 12
70 114.83 radiation 10 1440 < th dose dependent rect. 12 20
72 114.84 humidity 90 1440 < th dose dependent sin 1 NA
76 114.86 humidity 70 1440 > th dose dependent rect. 10 4
94 115.05 humidity 50 1440 > th dose dependent rect. 8 9
103 115.10 humidity 80 1440 > th dose independent rect. 7 10
114 115.18 radiation 10 1440 < th dose dependent sin 22 NA
118 115.19 humidity 70 1440 > th dose independent rect. 11 2
126 115.22 humidity 50 1440 > th dose dependent rect. 5 12
130 115.24 humidity 50 1440 > th dose dependent sin 0 NA
148 115.33 humidity 80 1440 > th dose independent sin 0 NA
153 115.33 radiation 10 1440 < th dose dependent rect. 6 23
175 115.40 radiation 10 1440 < th dose dependent rect. 6 18
180 115.41 radiation 10 1440 < th dose dependent rect. 6 13
184 115.41 radiation 10 1440 < th dose dependent rect. 6 16
232 115.53 radiation 10 1440 < th dose independent rect. 9 22
308 115.73 humidity 90 1440 < th dose dependent rect. 5 21
310 115.73 radiation 10 1440 < th dose dependent rect. 21 22
312 115.74 radiation 10 1440 < th dose dependent no NA NA
315 115.74 radiation 10 1440 < th dose dependent rect. 1 18
318 115.74 radiation 10 1440 < th dose dependent rect. 23 20
319 115.74 radiation 10 1440 < th dose dependent rect. 1 21
326 115.74 radiation 10 1440 < th dose dependent rect. 4 23
336 115.75 radiation 10 1440 < th dose dependent rect. 4 20
349 115.76 radiation 10 1440 < th dose dependent rect. 4 15
353 115.76 humidity 90 1440 < th dose dependent rect. 5 19
364 115.76 humidity 90 1440 < th dose dependent rect. 1 23
411 115.83 humidity 90 1440 < th dose dependent no NA NA
413 115.84 humidity 90 1440 < th dose dependent rect. 13 23
414 115.85 humidity 90 1440 < th dose dependent rect. 7 23
483 116.03 humidity 90 1440 < th dose dependent rect. 15 23
509 116.10 radiation 10 1440 < th dose dependent rect. 18 23
551 116.21 humidity 50 1440 > th dose dependent rect. 7 17
598 116.36 humidity 50 1440 > th dose dependent rect. 5 19
632 116.45 humidity 80 1440 < th dose independent sin 0 NA
661 116.56 wind 1 43200 > th dose independent rect. 5 1
689 116.60 humidity 80 1440 < th dose independent rect. 8 13
718 116.65 humidity 80 1440 < th dose independent rect. 9 6
728 116.67 radiation 10 1440 < th dose independent rect. 11 23
734 116.68 radiation 10 1440 < th dose dependent sin 13 NA
737 116.68 radiation 10 1440 < th dose dependent rect. 15 23
746 116.70 humidity 80 1440 < th dose independent rect. 8 9
748 116.70 humidity 80 1440 < th dose independent rect. 7 11
800 116.86 radiation 10 1440 < th dose independent rect. 9 18
806 116.87 radiation 10 1440 < th dose independent rect. 9 15
811 116.88 radiation 10 1440 < th dose independent rect. 9 10
813 116.88 radiation 10 1440 < th dose independent rect. 9 13
885 117.07 humidity 80 1440 > th dose independent rect. 23 19
948 117.21 humidity 80 1440 > th dose independent rect. 23 21