Os01g0658700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aldose 1-epimerase family protein.
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Os01g0658700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aldose 1-epimerase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 218.28 | 0.694 | 5.16 | -2.78 | 2.37 | 1.12 | 0.836 | 0.464 | -0.56 | 10.1 | 64.3 | 1221 | -- | -- |
| 218.43 | 0.688 | 5.17 | -2.8 | 2.38 | 1.19 | 0.803 | -- | -0.554 | 10.1 | 64 | 1216 | -- | -- |
| 220.95 | 0.692 | 5.17 | -2.76 | 2.37 | 1.15 | -- | 0.171 | -0.557 | 10.1 | 64 | 1221 | -- | -- |
| 220.97 | 0.692 | 5.17 | -2.77 | 2.37 | 1.17 | -- | -- | -0.554 | 10.1 | 64 | 1216 | -- | -- |
| 496.62 | 1.04 | 5.25 | -2.63 | -- | 1.55 | -- | 0.843 | -0.658 | -- | 80.46 | 1557 | -- | -- |
| 243.84 | 0.732 | 5.21 | -2.59 | 2.28 | -- | 0.627 | -- | -0.734 | 9.92 | -- | -- | -- | -- |
| 245.36 | 0.734 | 5.21 | -2.56 | 2.27 | -- | -- | -- | -0.732 | 9.92 | -- | -- | -- | -- |
| 489.21 | 1.03 | 5.26 | -2.61 | -- | 1.54 | -- | -- | -0.695 | -- | 88.07 | 1522 | -- | -- |
| 407.13 | 0.94 | 5.16 | -- | 2.37 | 0.893 | -- | -- | -0.466 | 10 | 94.01 | 1382 | -- | -- |
| 555.51 | 1.1 | 5.27 | -2.59 | -- | -- | -- | -- | -0.733 | -- | -- | -- | -- | -- |
| 418.49 | 0.957 | 5.15 | -- | 2.28 | -- | -- | -- | -0.447 | 10 | -- | -- | -- | -- |
| 666.96 | 1.21 | 5.21 | -- | -- | 1.53 | -- | -- | -0.452 | -- | 94.01 | 1382 | -- | -- |
| 732.29 | 1.26 | 5.21 | -- | -- | -- | -- | -- | -0.445 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 213.65 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 5 | 215.42 | temperature | 10 | 30 | > th | dose dependent | rect. | 4 | 21 |
| 6 | 215.71 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 10 | 216.07 | humidity | 60 | 1440 | < th | dose dependent | sin | 11 | NA |
| 14 | 216.39 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 17 | 216.47 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 26 | 216.76 | humidity | 60 | 1440 | < th | dose dependent | rect. | 15 | 20 |
| 28 | 216.91 | humidity | 80 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 34 | 216.96 | humidity | 60 | 1440 | < th | dose independent | sin | 11 | NA |
| 37 | 217.00 | humidity | 50 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 41 | 217.02 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 42 | 217.03 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 52 | 217.12 | humidity | 60 | 1440 | > th | dose independent | sin | 11 | NA |
| 53 | 217.12 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 57 | 217.18 | humidity | 60 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 72 | 217.29 | humidity | 60 | 1440 | < th | dose independent | rect. | 16 | 18 |
| 76 | 217.34 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 12 |
| 84 | 217.39 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 3 |
| 87 | 217.40 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 88 | 217.40 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 7 |
| 112 | 217.53 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 128 | 217.55 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 139 | 217.62 | humidity | 80 | 1440 | < th | dose dependent | sin | 15 | NA |
| 163 | 217.79 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 179 | 217.83 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 184 | 217.84 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 188 | 217.86 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 20 |
| 324 | 218.63 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 337 | 218.67 | radiation | 30 | 1440 | < th | dose independent | rect. | 2 | 6 |
| 529 | 219.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 17 |
| 565 | 219.28 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 9 |
| 605 | 219.36 | temperature | 25 | 10 | > th | dose independent | rect. | 24 | 20 |
| 647 | 219.51 | humidity | 50 | 1440 | > th | dose dependent | sin | 19 | NA |
| 707 | 219.74 | humidity | 50 | 1440 | > th | dose independent | rect. | 2 | 15 |
| 741 | 219.85 | humidity | 50 | 1440 | > th | dose independent | rect. | 23 | 18 |
| 763 | 219.91 | humidity | 50 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 784 | 219.94 | humidity | 50 | 1440 | > th | dose independent | rect. | 21 | 20 |
| 809 | 219.97 | humidity | 50 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 814 | 219.99 | humidity | 50 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 928 | 220.37 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 936 | 220.40 | humidity | 60 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 971 | 220.47 | humidity | 60 | 1440 | < th | dose dependent | no | NA | NA |