BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0658700 Os01g0658700|AK101948
(314 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0658700 Aldose 1-epimerase family protein 654 0.0
Os04g0658000 Similar to Possible apospory-associated like p... 429 e-120
AK070482 416 e-116
Os02g0176900 Aldose 1-epimerase family protein 364 e-101
Os05g0569400 Aldose 1-epimerase family protein 300 1e-81
Os09g0327400 Aldose 1-epimerase family protein 149 2e-36
Os04g0603000 Aldose 1-epimerase family protein 103 1e-22
Os08g0241500 Aldose 1-epimerase family protein 72 6e-13
>Os01g0658700 Aldose 1-epimerase family protein
Length = 314
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/314 (100%), Positives = 314/314 (100%)
Query: 1 MSMGHYSEQRPGFEVTKDWNGADQVMIRSPRGASVLVSLHGGQVVSWRNDRGEELLFTSS 60
MSMGHYSEQRPGFEVTKDWNGADQVMIRSPRGASVLVSLHGGQVVSWRNDRGEELLFTSS
Sbjct: 1 MSMGHYSEQRPGFEVTKDWNGADQVMIRSPRGASVLVSLHGGQVVSWRNDRGEELLFTSS 60
Query: 61 KAIFKPPKAMRGGIPICFPQFGNCGTLEQHGFARNRLWAIDDEAPPLNHNDNNGKVSVDL 120
KAIFKPPKAMRGGIPICFPQFGNCGTLEQHGFARNRLWAIDDEAPPLNHNDNNGKVSVDL
Sbjct: 61 KAIFKPPKAMRGGIPICFPQFGNCGTLEQHGFARNRLWAIDDEAPPLNHNDNNGKVSVDL 120
Query: 121 LLKPSEDDLKCWPHCFEFRLRVSLSTDGDLSLVSRVRNVNGKPFSFSFAYHTYLSVSDIS 180
LLKPSEDDLKCWPHCFEFRLRVSLSTDGDLSLVSRVRNVNGKPFSFSFAYHTYLSVSDIS
Sbjct: 121 LLKPSEDDLKCWPHCFEFRLRVSLSTDGDLSLVSRVRNVNGKPFSFSFAYHTYLSVSDIS 180
Query: 181 EVRIEGLETLDYLDNLSQRERFTEQGDAITFESEVDRVYVGSPSVIAVLDHEKKRTFIVR 240
EVRIEGLETLDYLDNLSQRERFTEQGDAITFESEVDRVYVGSPSVIAVLDHEKKRTFIVR
Sbjct: 181 EVRIEGLETLDYLDNLSQRERFTEQGDAITFESEVDRVYVGSPSVIAVLDHEKKRTFIVR 240
Query: 241 KEGLPDVVVWNPWDKKSKTMADFGDEEYKQMLCVDAAAVERAITLKPGEEWTGKLELSAV 300
KEGLPDVVVWNPWDKKSKTMADFGDEEYKQMLCVDAAAVERAITLKPGEEWTGKLELSAV
Sbjct: 241 KEGLPDVVVWNPWDKKSKTMADFGDEEYKQMLCVDAAAVERAITLKPGEEWTGKLELSAV 300
Query: 301 ASTNCSDHLDYPCS 314
ASTNCSDHLDYPCS
Sbjct: 301 ASTNCSDHLDYPCS 314
>Os04g0658000 Similar to Possible apospory-associated like protein
Length = 344
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/305 (66%), Positives = 249/305 (81%), Gaps = 4/305 (1%)
Query: 9 QRPGFEVT-KDWNGADQVMIRSPRGASVLVSLHGGQVVSWRNDRGEELLFTSSKAIFKPP 67
Q+ G VT K NG D+V++R RG+S V L+GG V SW+++ GEELLF S+KAIFKPP
Sbjct: 25 QQEGPVVTCKGVNGLDKVVLREVRGSSAEVYLYGGHVTSWKDEHGEELLFVSNKAIFKPP 84
Query: 68 KAMRGGIPICFPQFGNCGTLEQHGFARNRLWAIDDEAPPLNHNDNNGKVSVDLLLKPSED 127
KA+RGGIPICFPQF N G L+ HGFARNR W+++++ PP +N K VDL+L +E+
Sbjct: 85 KAIRGGIPICFPQFSNFGNLDPHGFARNRTWSVENDPPPFPVPTSN-KAYVDLILTHTEE 143
Query: 128 DLKCWPHCFEFRLRVSLSTDGDLSLVSRVRNVN--GKPFSFSFAYHTYLSVSDISEVRIE 185
DLK WPH +EFRLRV+L GDL L SR+RN N GKPFSF+FAYHTY S+SDISEVR+E
Sbjct: 144 DLKIWPHSYEFRLRVALGPGGDLMLTSRIRNTNADGKPFSFTFAYHTYFSISDISEVRVE 203
Query: 186 GLETLDYLDNLSQRERFTEQGDAITFESEVDRVYVGSPSVIAVLDHEKKRTFIVRKEGLP 245
GLETLDYLDNL +R R+TEQGDAI FESE+DR+Y+G+PS IA++DHEKKRTF+VRK GLP
Sbjct: 204 GLETLDYLDNLQERNRYTEQGDAIVFESELDRIYLGTPSKIAIIDHEKKRTFVVRKGGLP 263
Query: 246 DVVVWNPWDKKSKTMADFGDEEYKQMLCVDAAAVERAITLKPGEEWTGKLELSAVASTNC 305
D VVWNPWDKK+K M+DFGD+EYK+M+CV+AAA+E+ ITLKPGEEWTGKLELSAV S+
Sbjct: 264 DAVVWNPWDKKAKAMSDFGDDEYKRMVCVEAAAIEKPITLKPGEEWTGKLELSAVPSSYY 323
Query: 306 SDHLD 310
S LD
Sbjct: 324 SGQLD 328
>AK070482
Length = 330
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 195/276 (70%), Positives = 227/276 (82%), Gaps = 3/276 (1%)
Query: 37 VSLHGGQVVSWRNDRGEELLFTSSKAIFKPPKAMRGGIPICFPQFGNCGTLEQHGFARNR 96
V L+GGQV SW+NDRG+ELLF SSKA FKPPKA+RGGIPICFPQFG G LE+HGFARNR
Sbjct: 49 VHLYGGQVTSWKNDRGDELLFVSSKATFKPPKAIRGGIPICFPQFGTHGILEKHGFARNR 108
Query: 97 LWAIDDEAPPLNHNDNNGKVSVDLLLKPSEDDLKCWPHCFEFRLRVSLSTDGDLSLVSRV 156
WAIDD PP K VDL+LK SE+DLK WPH FEFRLRV+L GDL+L SR+
Sbjct: 109 FWAIDDNPPPFP-TSTAAKAFVDLILKTSEEDLKIWPHSFEFRLRVALGPGGDLALTSRI 167
Query: 157 RNVN--GKPFSFSFAYHTYLSVSDISEVRIEGLETLDYLDNLSQRERFTEQGDAITFESE 214
RN N G+PFSF+FAYHTY SVSDISEVRIEGLETLDY+D L +ER TEQGDAI FESE
Sbjct: 168 RNTNTDGRPFSFTFAYHTYFSVSDISEVRIEGLETLDYIDCLRGKERSTEQGDAIVFESE 227
Query: 215 VDRVYVGSPSVIAVLDHEKKRTFIVRKEGLPDVVVWNPWDKKSKTMADFGDEEYKQMLCV 274
VD++Y+ +P+ IA++DHEKKRTF++RK+GLPD V+WNPWDK++K M DFGDEEYK MLCV
Sbjct: 228 VDKIYLDAPAKIAIIDHEKKRTFVLRKDGLPDAVLWNPWDKRTKNMQDFGDEEYKHMLCV 287
Query: 275 DAAAVERAITLKPGEEWTGKLELSAVASTNCSDHLD 310
+ AAVE+ ITLKPGEEW GK++LSAV S+ CS LD
Sbjct: 288 EPAAVEKPITLKPGEEWKGKMDLSAVPSSYCSGQLD 323
>Os02g0176900 Aldose 1-epimerase family protein
Length = 304
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/301 (59%), Positives = 224/301 (74%), Gaps = 8/301 (2%)
Query: 14 EVTKD-WNGADQVMIRSPRGASVLVSLHGGQVVSWRNDRGEELLFTSSKAIFKPPKAMRG 72
EV KD G +++++R G SV V L+GGQV+ W N+ E+LLF S KA FKPPKA+RG
Sbjct: 9 EVVKDGATGLEKLVLREAHGCSVQVFLYGGQVIFWENEYREQLLFVSRKAYFKPPKAIRG 68
Query: 73 GIPICFPQFGNCGTLEQHGFARNRLWAIDDEAPPLNHNDNNGKVSVDLLLKPSEDDLKCW 132
GI ICFPQFGN G LEQHGFARNRLW++D+ PP +N +DL+LK S +DLK W
Sbjct: 69 GIQICFPQFGNHGVLEQHGFARNRLWSVDETPPPFPATTSN--CHIDLILKQSPEDLKIW 126
Query: 133 PHCFEFRLRVSLSTDGDLSLVSRVRNVN--GKPFSFSFAYHTYLSVSDISEVRIEGLETL 190
PH FEFRLRV+LS GDL L SR++N N GKPF F F+Y+TY SVSDISEVR+EGLETL
Sbjct: 127 PHSFEFRLRVALSPTGDLMLTSRIKNTNADGKPFKFGFSYNTYFSVSDISEVRVEGLETL 186
Query: 191 DYLDNLSQRERFTEQGDAITFESEVDRVYVGSPSVIAVLDHEKKRTFIVRKEGLPDVVVW 250
DY+DNL +R TEQGDA+ FESE ++VY+ +P I ++DH+KKRTF +RKEGLPDVVVW
Sbjct: 187 DYIDNLQCGKRCTEQGDAVVFESEAEKVYLSAPPKIVIIDHDKKRTFELRKEGLPDVVVW 246
Query: 251 NPWDKKSKTMADFGDEEYKQMLCVDAAAVERAITLKPGEEWTGKLELSAVASTNCSDHLD 310
NPWD+K+KT+ DFG+EEYK MLCV AA E+ ITL+P T +L S++ +D L
Sbjct: 247 NPWDRKAKTILDFGEEEYKCMLCVGAANAEKPITLRPA---TARLASSSLDRLIEADELH 303
Query: 311 Y 311
+
Sbjct: 304 F 304
>Os05g0569400 Aldose 1-epimerase family protein
Length = 195
Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 141/162 (87%), Positives = 149/162 (91%)
Query: 57 FTSSKAIFKPPKAMRGGIPICFPQFGNCGTLEQHGFARNRLWAIDDEAPPLNHNDNNGKV 116
F +AIFKPPKAMRGGIPICFPQFGN GTLEQHGFARNR+WA+D+E PPLN NDNN K
Sbjct: 34 FLDVQAIFKPPKAMRGGIPICFPQFGNSGTLEQHGFARNRIWALDEEHPPLNQNDNNSKA 93
Query: 117 SVDLLLKPSEDDLKCWPHCFEFRLRVSLSTDGDLSLVSRVRNVNGKPFSFSFAYHTYLSV 176
SVDL+LKPSEDDLKCWPH FEFRLRVSL+ DG+LSLVSR+RNVNGKPFSFSF YHTYLSV
Sbjct: 94 SVDLILKPSEDDLKCWPHGFEFRLRVSLTKDGNLSLVSRIRNVNGKPFSFSFGYHTYLSV 153
Query: 177 SDISEVRIEGLETLDYLDNLSQRERFTEQGDAITFESEVDRV 218
SDISEVRIEGLETLDYLDNLSQRERFTEQGDAITFESEV V
Sbjct: 154 SDISEVRIEGLETLDYLDNLSQRERFTEQGDAITFESEVKNV 195
>Os09g0327400 Aldose 1-epimerase family protein
Length = 319
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 148/292 (50%), Gaps = 24/292 (8%)
Query: 11 PGFEVTKDWNGADQVMIRSPRGASVLVSLHGGQVVSWRNDRGEELLFTSSKAIFKPPKAM 70
PG V++ G ++ ++SP G+ + L G V SW+ G++LLF A+F K +
Sbjct: 46 PGVAVSEGNGGLPKIDLKSPHGSEAEIYLFGACVTSWKVPSGKDLLFVRPDAVFNGQKPI 105
Query: 71 RGGIPICFPQFGNCGTLEQHGFARNRLWAIDDEAPPLNHNDNNGKVSVDLLLKPSEDDLK 130
GGIP CFPQFG GT++QHGFARN W+I D N G +V L LK
Sbjct: 106 SGGIPHCFPQFGP-GTMQQHGFARNMNWSITDS------EANEGDPAVTLELKDDSYSRS 158
Query: 131 CWPHCFEFRLRVSLSTDGDLSLVSRVRNVNGKPFSFSFAYHTYLSVSDISEVRIEGL--- 187
W F+ +V+L + LS ++ N + KPFSF+ A H+Y S S IS V ++GL
Sbjct: 159 MWDFSFQALYKVALHST-SLSTTLKITNTDDKPFSFNSALHSYFSAS-ISGVSVKGLKGC 216
Query: 188 ETLDYLDNLSQRERFTEQGDAITFESEVDRVYVGSPSVIAVLDHEKKRTFIVRKEGLPDV 247
+TL+ + E+ + +TF VD +Y+G+PS + LD+ ++ D
Sbjct: 217 KTLNKDPDPKNPLEGKEEREEVTFPGFVDCIYLGAPSEL-TLDNGLGDKIVISNANWSDA 275
Query: 248 VVWNPWDKKSKTMADFGDEEYKQMLCVDAAAVERAITLKPGEEWTG--KLEL 297
V+WNP + YK +CV+ A +E + L P + W K+EL
Sbjct: 276 VLWNPHLQMEAC--------YKDFVCVENAKIE-TLQLGPNQSWVAEQKIEL 318
>Os04g0603000 Aldose 1-epimerase family protein
Length = 92
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 54/64 (84%)
Query: 247 VVVWNPWDKKSKTMADFGDEEYKQMLCVDAAAVERAITLKPGEEWTGKLELSAVASTNCS 306
VV+WNPWDK++K M DFGDEEYK MLCV+ AAVE+ ITLKPGEEW GK++LSAV S+ CS
Sbjct: 22 VVLWNPWDKRTKNMQDFGDEEYKHMLCVEPAAVEKPITLKPGEEWKGKMDLSAVPSSYCS 81
Query: 307 DHLD 310
LD
Sbjct: 82 GQLD 85
>Os08g0241500 Aldose 1-epimerase family protein
Length = 92
Score = 71.6 bits (174), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 134 HCFEFRLRVSLSTDGDLSLVSRVRNVN--GKPFSFSFAYHTYLSVSDISEV 182
+ FEFRLRV+L +GDLSL SR+RN N G+ FS++FAYHTY SVSDI V
Sbjct: 18 YSFEFRLRVALGPNGDLSLTSRIRNTNTDGRSFSYTFAYHTYFSVSDIRYV 68
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,554,673
Number of extensions: 496559
Number of successful extensions: 918
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 908
Number of HSP's successfully gapped: 8
Length of query: 314
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 213
Effective length of database: 11,762,187
Effective search space: 2505345831
Effective search space used: 2505345831
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)