Os02g0176900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aldose 1-epimerase family protein.
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Os02g0176900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aldose 1-epimerase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.71 | 0.543 | 4.52 | -0.884 | 0.926 | -1.23 | -0.208 | 2.04 | -0.0251 | 2.96 | 25.4 | 4485 | -- | -- |
| 122.72 | 0.516 | 4.51 | -0.839 | 0.876 | -1.43 | -0.17 | -- | 0.203 | 2.95 | 22.3 | 12332 | -- | -- |
| 133.85 | 0.539 | 4.52 | -0.883 | 0.923 | -1.23 | -- | 2.03 | -0.0256 | 2.94 | 25.41 | 4498 | -- | -- |
| 122.17 | 0.515 | 4.49 | -0.805 | 0.898 | -1.43 | -- | -- | 0.288 | 2.88 | 22.6 | 13390 | -- | -- |
| 158.37 | 0.589 | 4.58 | -1.57 | -- | -0.718 | -- | 0.32 | -0.123 | -- | 25.81 | 4708 | -- | -- |
| 166.93 | 0.606 | 4.64 | -1.83 | 0.879 | -- | -0.166 | -- | -0.376 | 3.06 | -- | -- | -- | -- |
| 167.02 | 0.605 | 4.64 | -1.83 | 0.878 | -- | -- | -- | -0.375 | 3.06 | -- | -- | -- | -- |
| 158.8 | 0.589 | 4.59 | -1.64 | -- | -0.71 | -- | -- | -0.144 | -- | 25.81 | 4708 | -- | -- |
| 126.13 | 0.523 | 4.48 | -- | 0.898 | -1.78 | -- | -- | 0.368 | 2.7 | 22.3 | 21988 | -- | -- |
| 211.16 | 0.679 | 4.64 | -1.79 | -- | -- | -- | -- | -0.353 | -- | -- | -- | -- | -- |
| 255.29 | 0.747 | 4.59 | -- | 0.842 | -- | -- | -- | -0.172 | 3.05 | -- | -- | -- | -- |
| 172.65 | 0.612 | 4.47 | -- | -- | -1.78 | -- | -- | 0.384 | -- | 22.3 | 20513 | -- | -- |
| 295.93 | 0.803 | 4.59 | -- | -- | -- | -- | -- | -0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.48 | temperature | 25 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 5 | 122.09 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 10 | 122.35 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 17 | 122.52 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 20 | 122.57 | temperature | 30 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 23 | 122.68 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 26 | 122.69 | temperature | 30 | 14400 | < th | dose dependent | rect. | 6 | 10 |
| 27 | 122.70 | temperature | 30 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 31 | 122.72 | temperature | 30 | 14400 | < th | dose dependent | rect. | 11 | 4 |
| 44 | 122.80 | temperature | 25 | 14400 | < th | dose dependent | sin | 2 | NA |
| 48 | 122.81 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 10 | 9 |
| 62 | 122.85 | temperature | 10 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 65 | 122.86 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 81 | 122.90 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 128 | 123.00 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 17 |
| 165 | 123.05 | temperature | 25 | 14400 | < th | dose dependent | rect. | 6 | 21 |
| 247 | 123.18 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 18 | NA |
| 291 | 123.24 | temperature | 25 | 14400 | < th | dose dependent | rect. | 14 | 22 |
| 303 | 123.26 | temperature | 25 | 14400 | < th | dose dependent | no | NA | NA |
| 315 | 123.28 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 316 | 123.28 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 17 |
| 320 | 123.28 | temperature | 25 | 14400 | < th | dose dependent | rect. | 18 | 23 |
| 422 | 123.41 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 10 | 14 |
| 458 | 123.45 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 10 | 10 |
| 505 | 123.52 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 17 | NA |
| 584 | 123.63 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 617 | 123.68 | temperature | 10 | 14400 | > th | dose dependent | rect. | 2 | 10 |
| 632 | 123.70 | temperature | 25 | 14400 | < th | dose dependent | sin | 17 | NA |
| 647 | 123.71 | temperature | 25 | 14400 | < th | dose dependent | rect. | 13 | 14 |
| 665 | 123.73 | temperature | 10 | 14400 | > th | dose dependent | rect. | 2 | 12 |
| 677 | 123.75 | temperature | 25 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 738 | 123.81 | temperature | 10 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 782 | 123.85 | temperature | 10 | 14400 | > th | dose dependent | sin | 4 | NA |