BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0176900 Os02g0176900|Os02g0176900
(304 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0176900 Aldose 1-epimerase family protein 632 0.0
Os04g0658000 Similar to Possible apospory-associated like p... 406 e-114
AK070482 387 e-108
Os01g0658700 Aldose 1-epimerase family protein 364 e-101
Os05g0569400 Aldose 1-epimerase family protein 219 3e-57
Os09g0327400 Aldose 1-epimerase family protein 130 1e-30
Os08g0241500 Aldose 1-epimerase family protein 82 7e-16
Os04g0603000 Aldose 1-epimerase family protein 65 8e-11
>Os02g0176900 Aldose 1-epimerase family protein
Length = 304
Score = 632 bits (1630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/304 (100%), Positives = 304/304 (100%)
Query: 1 MAGGVSSVEVVKDGATGLEKLVLREAHGCSVQVFLYGGQVIFWENEYREQLLFVSRKAYF 60
MAGGVSSVEVVKDGATGLEKLVLREAHGCSVQVFLYGGQVIFWENEYREQLLFVSRKAYF
Sbjct: 1 MAGGVSSVEVVKDGATGLEKLVLREAHGCSVQVFLYGGQVIFWENEYREQLLFVSRKAYF 60
Query: 61 KPPKAIRGGIQICFPQFGNHGVLEQHGFARNRLWSVDETPPPFPATTSNCHIDLILKQSP 120
KPPKAIRGGIQICFPQFGNHGVLEQHGFARNRLWSVDETPPPFPATTSNCHIDLILKQSP
Sbjct: 61 KPPKAIRGGIQICFPQFGNHGVLEQHGFARNRLWSVDETPPPFPATTSNCHIDLILKQSP 120
Query: 121 EDLKIWPHSFEFRLRVALSPTGDLMLTSRIKNTNADGKPFKFGFSYNTYFSVSDISEVRV 180
EDLKIWPHSFEFRLRVALSPTGDLMLTSRIKNTNADGKPFKFGFSYNTYFSVSDISEVRV
Sbjct: 121 EDLKIWPHSFEFRLRVALSPTGDLMLTSRIKNTNADGKPFKFGFSYNTYFSVSDISEVRV 180
Query: 181 EGLETLDYIDNLQCGKRCTEQGDAVVFESEAEKVYLSAPPKIVIIDHDKKRTFELRKEGL 240
EGLETLDYIDNLQCGKRCTEQGDAVVFESEAEKVYLSAPPKIVIIDHDKKRTFELRKEGL
Sbjct: 181 EGLETLDYIDNLQCGKRCTEQGDAVVFESEAEKVYLSAPPKIVIIDHDKKRTFELRKEGL 240
Query: 241 PDVVVWNPWDRKAKTILDFGEEEYKCMLCVGAANAEKPITLRPATARLASSSLDRLIEAD 300
PDVVVWNPWDRKAKTILDFGEEEYKCMLCVGAANAEKPITLRPATARLASSSLDRLIEAD
Sbjct: 241 PDVVVWNPWDRKAKTILDFGEEEYKCMLCVGAANAEKPITLRPATARLASSSLDRLIEAD 300
Query: 301 ELHF 304
ELHF
Sbjct: 301 ELHF 304
>Os04g0658000 Similar to Possible apospory-associated like protein
Length = 344
Score = 406 bits (1044), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/284 (68%), Positives = 228/284 (80%), Gaps = 4/284 (1%)
Query: 14 GATGLEKLVLREAHGCSVQVFLYGGQVIFWENEYREQLLFVSRKAYFKPPKAIRGGIQIC 73
G GL+K+VLRE G S +V+LYGG V W++E+ E+LLFVS KA FKPPKAIRGGI IC
Sbjct: 35 GVNGLDKVVLREVRGSSAEVYLYGGHVTSWKDEHGEELLFVSNKAIFKPPKAIRGGIPIC 94
Query: 74 FPQFGNHGVLEQHGFARNRLWSVDETPPPFPATTSN-CHIDLILKQSPEDLKIWPHSFEF 132
FPQF N G L+ HGFARNR WSV+ PPPFP TSN ++DLIL + EDLKIWPHS+EF
Sbjct: 95 FPQFSNFGNLDPHGFARNRTWSVENDPPPFPVPTSNKAYVDLILTHTEEDLKIWPHSYEF 154
Query: 133 RLRVALSPTGDLMLTSRIKNTNADGKPFKFGFSYNTYFSVSDISEVRVEGLETLDYIDNL 192
RLRVAL P GDLMLTSRI+NTNADGKPF F F+Y+TYFS+SDISEVRVEGLETLDY+DNL
Sbjct: 155 RLRVALGPGGDLMLTSRIRNTNADGKPFSFTFAYHTYFSISDISEVRVEGLETLDYLDNL 214
Query: 193 QCGKRCTEQGDAVVFESEAEKVYLSAPPKIVIIDHDKKRTFELRKEGLPDVVVWNPWDRK 252
Q R TEQGDA+VFESE +++YL P KI IIDH+KKRTF +RK GLPD VVWNPWD+K
Sbjct: 215 QERNRYTEQGDAIVFESELDRIYLGTPSKIAIIDHEKKRTFVVRKGGLPDAVVWNPWDKK 274
Query: 253 AKTILDFGEEEYKCMLCVGAANAEKPITLRPA---TARLASSSL 293
AK + DFG++EYK M+CV AA EKPITL+P T +L S++
Sbjct: 275 AKAMSDFGDDEYKRMVCVEAAAIEKPITLKPGEEWTGKLELSAV 318
>AK070482
Length = 330
Score = 387 bits (994), Expect = e-108, Method: Compositional matrix adjust.
Identities = 180/253 (71%), Positives = 210/253 (83%), Gaps = 1/253 (0%)
Query: 33 VFLYGGQVIFWENEYREQLLFVSRKAYFKPPKAIRGGIQICFPQFGNHGVLEQHGFARNR 92
V LYGGQV W+N+ ++LLFVS KA FKPPKAIRGGI ICFPQFG HG+LE+HGFARNR
Sbjct: 49 VHLYGGQVTSWKNDRGDELLFVSSKATFKPPKAIRGGIPICFPQFGTHGILEKHGFARNR 108
Query: 93 LWSVDETPPPFPATTS-NCHIDLILKQSPEDLKIWPHSFEFRLRVALSPTGDLMLTSRIK 151
W++D+ PPPFP +T+ +DLILK S EDLKIWPHSFEFRLRVAL P GDL LTSRI+
Sbjct: 109 FWAIDDNPPPFPTSTAAKAFVDLILKTSEEDLKIWPHSFEFRLRVALGPGGDLALTSRIR 168
Query: 152 NTNADGKPFKFGFSYNTYFSVSDISEVRVEGLETLDYIDNLQCGKRCTEQGDAVVFESEA 211
NTN DG+PF F F+Y+TYFSVSDISEVR+EGLETLDYID L+ +R TEQGDA+VFESE
Sbjct: 169 NTNTDGRPFSFTFAYHTYFSVSDISEVRIEGLETLDYIDCLRGKERSTEQGDAIVFESEV 228
Query: 212 EKVYLSAPPKIVIIDHDKKRTFELRKEGLPDVVVWNPWDRKAKTILDFGEEEYKCMLCVG 271
+K+YL AP KI IIDH+KKRTF LRK+GLPD V+WNPWD++ K + DFG+EEYK MLCV
Sbjct: 229 DKIYLDAPAKIAIIDHEKKRTFVLRKDGLPDAVLWNPWDKRTKNMQDFGDEEYKHMLCVE 288
Query: 272 AANAEKPITLRPA 284
A EKPITL+P
Sbjct: 289 PAAVEKPITLKPG 301
>Os01g0658700 Aldose 1-epimerase family protein
Length = 314
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/301 (59%), Positives = 224/301 (74%), Gaps = 8/301 (2%)
Query: 9 EVVKDGATGLEKLVLREAHGCSVQVFLYGGQVIFWENEYREQLLFVSRKAYFKPPKAIRG 68
EV KD G +++++R G SV V L+GGQV+ W N+ E+LLF S KA FKPPKA+RG
Sbjct: 14 EVTKD-WNGADQVMIRSPRGASVLVSLHGGQVVSWRNDRGEELLFTSSKAIFKPPKAMRG 72
Query: 69 GIQICFPQFGNHGVLEQHGFARNRLWSVDETPPPFPATTSN--CHIDLILKQSPEDLKIW 126
GI ICFPQFGN G LEQHGFARNRLW++D+ PP +N +DL+LK S +DLK W
Sbjct: 73 GIPICFPQFGNCGTLEQHGFARNRLWAIDDEAPPLNHNDNNGKVSVDLLLKPSEDDLKCW 132
Query: 127 PHSFEFRLRVALSPTGDLMLTSRIKNTNADGKPFKFGFSYNTYFSVSDISEVRVEGLETL 186
PH FEFRLRV+LS GDL L SR++N N GKPF F F+Y+TY SVSDISEVR+EGLETL
Sbjct: 133 PHCFEFRLRVSLSTDGDLSLVSRVRNVN--GKPFSFSFAYHTYLSVSDISEVRIEGLETL 190
Query: 187 DYIDNLQCGKRCTEQGDAVVFESEAEKVYLSAPPKIVIIDHDKKRTFELRKEGLPDVVVW 246
DY+DNL +R TEQGDA+ FESE ++VY+ +P I ++DH+KKRTF +RKEGLPDVVVW
Sbjct: 191 DYLDNLSQRERFTEQGDAITFESEVDRVYVGSPSVIAVLDHEKKRTFIVRKEGLPDVVVW 250
Query: 247 NPWDRKAKTILDFGEEEYKCMLCVGAANAEKPITLRPA---TARLASSSLDRLIEADELH 303
NPWD+K+KT+ DFG+EEYK MLCV AA E+ ITL+P T +L S++ +D L
Sbjct: 251 NPWDKKSKTMADFGDEEYKQMLCVDAAAVERAITLKPGEEWTGKLELSAVASTNCSDHLD 310
Query: 304 F 304
+
Sbjct: 311 Y 311
>Os05g0569400 Aldose 1-epimerase family protein
Length = 195
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 125/164 (76%), Gaps = 4/164 (2%)
Query: 53 FVSRKAYFKPPKAIRGGIQICFPQFGNHGVLEQHGFARNRLWSVDETPPPFPATTSN--C 110
F+ +A FKPPKA+RGGI ICFPQFGN G LEQHGFARNR+W++DE PP +N
Sbjct: 34 FLDVQAIFKPPKAMRGGIPICFPQFGNSGTLEQHGFARNRIWALDEEHPPLNQNDNNSKA 93
Query: 111 HIDLILKQSPEDLKIWPHSFEFRLRVALSPTGDLMLTSRIKNTNADGKPFKFGFSYNTYF 170
+DLILK S +DLK WPH FEFRLRV+L+ G+L L SRI+N N GKPF F F Y+TY
Sbjct: 94 SVDLILKPSEDDLKCWPHGFEFRLRVSLTKDGNLSLVSRIRNVN--GKPFSFSFGYHTYL 151
Query: 171 SVSDISEVRVEGLETLDYIDNLQCGKRCTEQGDAVVFESEAEKV 214
SVSDISEVR+EGLETLDY+DNL +R TEQGDA+ FESE + V
Sbjct: 152 SVSDISEVRIEGLETLDYLDNLSQRERFTEQGDAITFESEVKNV 195
>Os09g0327400 Aldose 1-epimerase family protein
Length = 319
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 22/290 (7%)
Query: 10 VVKDGATGLEKLVLREAHGCSVQVFLYGGQVIFWENEYREQLLFVSRKAYFKPPKAIRGG 69
V +G GL K+ L+ HG +++L+G V W+ + LLFV A F K I GG
Sbjct: 49 AVSEGNGGLPKIDLKSPHGSEAEIYLFGACVTSWKVPSGKDLLFVRPDAVFNGQKPISGG 108
Query: 70 IQICFPQFGNHGVLEQHGFARNRLWSVDETPPPFPATTSNCHIDLILKQSPEDLKIWPHS 129
I CFPQFG G ++QHGFARN WS+ ++ A + + L LK +W S
Sbjct: 109 IPHCFPQFG-PGTMQQHGFARNMNWSITDS----EANEGDPAVTLELKDDSYSRSMWDFS 163
Query: 130 FEFRLRVALSPTGDLMLTSRIKNTNADGKPFKFGFSYNTYFSVSDISEVRVEGL---ETL 186
F+ +VAL T L++ +K TN D KPF F + ++YFS S IS V V+GL +TL
Sbjct: 164 FQALYKVALHSTS---LSTTLKITNTDDKPFSFNSALHSYFSAS-ISGVSVKGLKGCKTL 219
Query: 187 DYIDNLQCGKRCTEQGDAVVFESEAEKVYLSAPPKIVIIDHDKKRTFELRKEGLPDVVVW 246
+ + + E+ + V F + +YL AP ++ +D+ + D V+W
Sbjct: 220 NKDPDPKNPLEGKEEREEVTFPGFVDCIYLGAPSELT-LDNGLGDKIVISNANWSDAVLW 278
Query: 247 NPWDRKAKTILDFGEEEYKCMLCVGAANAEKPITLRPATARLASSSLDRL 296
NP + E YK +CV A E + L P + +A ++ +
Sbjct: 279 NPHLQM--------EACYKDFVCVENAKIET-LQLGPNQSWVAEQKIELI 319
>Os08g0241500 Aldose 1-epimerase family protein
Length = 92
Score = 81.6 bits (200), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 42/51 (82%)
Query: 128 HSFEFRLRVALSPTGDLMLTSRIKNTNADGKPFKFGFSYNTYFSVSDISEV 178
+SFEFRLRVAL P GDL LTSRI+NTN DG+ F + F+Y+TYFSVSDI V
Sbjct: 18 YSFEFRLRVALGPNGDLSLTSRIRNTNTDGRSFSYTFAYHTYFSVSDIRYV 68
>Os04g0603000 Aldose 1-epimerase family protein
Length = 92
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 243 VVVWNPWDRKAKTILDFGEEEYKCMLCVGAANAEKPITLRPA 284
VV+WNPWD++ K + DFG+EEYK MLCV A EKPITL+P
Sbjct: 22 VVLWNPWDKRTKNMQDFGDEEYKHMLCVEPAAVEKPITLKPG 63
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.138 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,425,415
Number of extensions: 501429
Number of successful extensions: 932
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 924
Number of HSP's successfully gapped: 8
Length of query: 304
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 204
Effective length of database: 11,814,401
Effective search space: 2410137804
Effective search space used: 2410137804
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)