Os04g0603000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aldose 1-epimerase family protein.
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Os04g0603000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aldose 1-epimerase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.45 | 0.246 | 11.6 | -0.107 | 1.26 | 1.38 | 0.064 | -0.0134 | 0.0763 | 5.17 | 7.69 | 351 | -- | -- |
| 27.45 | 0.244 | 11.6 | -0.105 | 1.26 | 1.38 | 0.0676 | -- | 0.0768 | 5.18 | 7.791 | 353 | -- | -- |
| 27.46 | 0.244 | 11.6 | -0.112 | 1.26 | 1.38 | -- | -0.0433 | 0.0741 | 5.17 | 7.698 | 354 | -- | -- |
| 27.46 | 0.244 | 11.6 | -0.104 | 1.26 | 1.38 | -- | -- | 0.077 | 5.17 | 7.795 | 354 | -- | -- |
| 65.58 | 0.377 | 11.6 | -0.173 | -- | 1.04 | -- | 0.0714 | 0.0888 | -- | 8.869 | 2680 | -- | -- |
| 47.75 | 0.324 | 11.6 | 0.194 | 0.873 | -- | -0.221 | -- | 0.275 | 5.05 | -- | -- | -- | -- |
| 47.88 | 0.324 | 11.6 | 0.194 | 0.872 | -- | -- | -- | 0.276 | 5.07 | -- | -- | -- | -- |
| 62.94 | 0.37 | 11.6 | -0.147 | -- | 1.21 | -- | -- | 0.0802 | -- | 14.6 | 1265 | -- | -- |
| 27.72 | 0.245 | 11.6 | -- | 1.24 | 1.32 | -- | -- | 0.0946 | 5.2 | 8.445 | 364 | -- | -- |
| 87.75 | 0.438 | 11.6 | 0.225 | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
| 48.87 | 0.327 | 11.6 | -- | 0.875 | -- | -- | -- | 0.255 | 5.06 | -- | -- | -- | -- |
| 63.44 | 0.371 | 11.6 | -- | -- | 1.14 | -- | -- | 0.105 | -- | 14.8 | 1264 | -- | -- |
| 89.1 | 0.441 | 11.6 | -- | -- | -- | -- | -- | 0.273 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 2 | 27.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 3 | 27.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 4 | 27.30 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 5 | 27.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 6 | 27.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 11 |
| 7 | 27.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 24 | 27.36 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 31 | 27.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 57 | 27.41 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 75 | 27.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 10 |
| 149 | 27.58 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 222 | 27.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 322 | 27.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 365 | 27.83 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 390 | 27.86 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 393 | 27.87 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 3 |
| 405 | 27.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 409 | 27.90 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 459 | 27.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 531 | 28.02 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 532 | 28.03 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 573 | 28.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 578 | 28.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 617 | 28.13 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 639 | 28.16 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 739 | 28.28 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |