BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0486600 Os04g0486600|AK064960
(337 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0486600 Similar to Glyceraldehyde-3-phosphate dehydrog... 657 0.0
Os02g0601300 Similar to Glyceraldehyde-3-phosphate dehydrog... 618 e-177
Os08g0126300 Similar to Glyceraldehyde-3-phosphate dehydrog... 588 e-168
AK100159 588 e-168
Os06g0666600 Similar to Glyceraldehyde-3-phosphate dehydrog... 485 e-137
Os02g0171100 Similar to Glyceraldehyde-3-phosphate dehydrog... 482 e-136
AK109097 467 e-132
AK108431 450 e-127
AK108644 446 e-125
Os03g0129300 Similar to Glyceraldehyde-3-phosphate dehydrog... 263 1e-70
AK109016 253 1e-67
Os04g0459500 Similar to GADPH (383 AA) (Fragment) 248 5e-66
D21280 175 4e-44
>Os04g0486600 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 337
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/337 (95%), Positives = 322/337 (95%)
Query: 1 MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHE 60
MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHE
Sbjct: 1 MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHE 60
Query: 61 VKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXX 120
VKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFT
Sbjct: 61 VKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKK 120
Query: 121 VVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
VVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV
Sbjct: 121 VVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
Query: 181 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV
Sbjct: 181 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
Query: 241 DVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAK 300
DVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAK
Sbjct: 241 DVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAK 300
Query: 301 AGIALNDNFVKLVSWYDNEWGYSSRVVDLIRHMYNTQ 337
AGIALNDNFVKLVSWYDNEWGYSSRVVDLIRHMYNTQ
Sbjct: 301 AGIALNDNFVKLVSWYDNEWGYSSRVVDLIRHMYNTQ 337
>Os02g0601300 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 337
Score = 618 bits (1594), Expect = e-177, Method: Compositional matrix adjust.
Identities = 299/337 (88%), Positives = 312/337 (92%)
Query: 1 MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHE 60
M KIKIGINGFGRIGRLVARVALQS+DVELVAVNDPFITT+YMTYMFKYDTVHGQWKHHE
Sbjct: 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHE 60
Query: 61 VKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXX 120
VKVKDSKTL+FG KEV VFGCRNPEEIPW GAE+VVESTGVFT
Sbjct: 61 VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGGAKK 120
Query: 121 VVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
VVISAPSKDAPMFVVGVNEKEYK D++IVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV
Sbjct: 121 VVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
Query: 181 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
HAITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV
Sbjct: 181 HAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
Query: 241 DVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAK 300
DVSVVDLTVRLEKPASYDQIKAAIKEE+EGKLKGILGYVEEDLVSTDFQGD+RSSIFDAK
Sbjct: 241 DVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAK 300
Query: 301 AGIALNDNFVKLVSWYDNEWGYSSRVVDLIRHMYNTQ 337
AGIAL+D FVKLVSWYDNEWGYS+RV+DLIRHM++T
Sbjct: 301 AGIALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHSTN 337
>Os08g0126300 Similar to Glyceraldehyde-3-phosphate dehydrogenase (Fragment)
Length = 337
Score = 588 bits (1515), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/337 (84%), Positives = 302/337 (89%)
Query: 1 MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHE 60
M KIKIGINGFGRIGRLVARVALQS+DVELVAVNDPFITTDYMTYMFKYDTVHGQWKH +
Sbjct: 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSD 60
Query: 61 VKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXX 120
+K+KDSKTLL GEK VTVFG RNP+EIPW E GAE+VVESTGVFT
Sbjct: 61 IKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKK 120
Query: 121 VVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
VVISAPSKDAPMFV GVNE +Y DIDIVSNASCTTNCLAPLAKVI+D FGI+EGLMTTV
Sbjct: 121 VVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTV 180
Query: 181 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPTV
Sbjct: 181 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 240
Query: 241 DVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAK 300
DVSVVDLTVR+EK ASYD IK+AIK SEGKLKGI+GYVEEDLVSTDF GD+RSSIFDAK
Sbjct: 241 DVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAK 300
Query: 301 AGIALNDNFVKLVSWYDNEWGYSSRVVDLIRHMYNTQ 337
AGIALNDNFVKLV+WYDNEWGYS+RV+DLIRHM TQ
Sbjct: 301 AGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337
>AK100159
Length = 337
Score = 588 bits (1515), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/337 (84%), Positives = 302/337 (89%)
Query: 1 MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHE 60
M KIKIGINGFGRIGRLVARVALQS+DVELVAVNDPFITTDYMTYMFKYDTVHGQWKH +
Sbjct: 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSD 60
Query: 61 VKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXX 120
+K+KDSKTLL GEK VTVFG RNP+EIPW E GAE+VVESTGVFT
Sbjct: 61 IKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKK 120
Query: 121 VVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
VVISAPSKDAPMFV GVNE +Y DIDIVSNASCTTNCLAPLAKVI+D FGI+EGLMTTV
Sbjct: 121 VVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTV 180
Query: 181 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPTV
Sbjct: 181 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 240
Query: 241 DVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAK 300
DVSVVDLTVR+EK ASYD IK+AIK SEGKLKGI+GYVEEDLVSTDF GD+RSSIFDAK
Sbjct: 241 DVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAK 300
Query: 301 AGIALNDNFVKLVSWYDNEWGYSSRVVDLIRHMYNTQ 337
AGIALNDNFVKLV+WYDNEWGYS+RV+DLIRHM TQ
Sbjct: 301 AGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337
>Os06g0666600 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 415
Score = 485 bits (1249), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/331 (70%), Positives = 266/331 (80%), Gaps = 1/331 (0%)
Query: 3 KIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHEVK 62
K K+GINGFGRIGRLV R+A DD+E+VAVNDPFI YM YMFKYD+ HG +K +K
Sbjct: 79 KTKVGINGFGRIGRLVLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKG-TIK 137
Query: 63 VKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXXVV 122
V D TL K+++V R+P +IPWG GAE+VVES+GVFT VV
Sbjct: 138 VVDESTLEINGKKISVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVV 197
Query: 123 ISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
ISAPS DAPMFVVGVNEK Y P +++VSNASCTTNCLAPLAK++++ FGI EGLMTTVHA
Sbjct: 198 ISAPSADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAKIVHEEFGIAEGLMTTVHA 257
Query: 183 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
TATQKTVDGPS KDWRGGR AS NIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT +V
Sbjct: 258 TTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPNV 317
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAG 302
SVVDLT RLEK ASY+ +KAAIKE SEG LKGILGY +ED+VS DF GD RSSIFDAKAG
Sbjct: 318 SVVDLTCRLEKSASYEDVKAAIKEASEGSLKGILGYTDEDVVSNDFIGDTRSSIFDAKAG 377
Query: 303 IALNDNFVKLVSWYDNEWGYSSRVVDLIRHM 333
I L+ +F+KLVSWYDNEWGYS+RV+DLI HM
Sbjct: 378 IGLSSSFMKLVSWYDNEWGYSNRVLDLIGHM 408
>Os02g0171100 Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
(GAPDH)
Length = 411
Score = 482 bits (1241), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/331 (70%), Positives = 265/331 (80%), Gaps = 1/331 (0%)
Query: 3 KIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHEVK 62
K K+GINGFGRIGRLV R+A DD+E+VAVNDPFI YM YMFKYD+ HG +K +K
Sbjct: 75 KTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKG-SIK 133
Query: 63 VKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXXVV 122
V D TL K+VT+ R+P +IPWG GAE+VVES+GVFT VV
Sbjct: 134 VVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVV 193
Query: 123 ISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
ISAPS DAPMFVVGVNEK Y P +++VSNASCTTNCLAPLAKV+++ FGIVEGLMTTVHA
Sbjct: 194 ISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHA 253
Query: 183 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
TATQKTVDGPS KDWRGGR A+ NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +V
Sbjct: 254 TTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 313
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAG 302
SVVDLT R+EK ASYD +KAAIK SEG LKGILGY +ED+VS DF GD RSSIFDAKAG
Sbjct: 314 SVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAG 373
Query: 303 IALNDNFVKLVSWYDNEWGYSSRVVDLIRHM 333
I L+ +F+KLVSWYDNEWGYS+RV+DLI HM
Sbjct: 374 IGLSSSFMKLVSWYDNEWGYSNRVLDLIAHM 404
>AK109097
Length = 334
Score = 467 bits (1201), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/333 (68%), Positives = 269/333 (80%), Gaps = 9/333 (2%)
Query: 6 IGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWK---HHEVK 62
IGINGFGRIGR+V R AL+ V +VA+NDPFI DYM YMFKYD+ HG++K HH
Sbjct: 5 IGINGFGRIGRIVLRAALEKG-VNVVAINDPFIPLDYMVYMFKYDSTHGRFKGDIHHA-- 61
Query: 63 VKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXXVV 122
+ L +++VF ++P +IPWG++GAE+VVE+ GVFT V+
Sbjct: 62 ---NGFLYVNGHQISVFTEKDPTQIPWGKSGAEYVVEAAGVFTTIDKCQAHITGGAKKVI 118
Query: 123 ISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
I+APS DAPMFV GVNEK Y P I+I+SNASCTTNCLAPLAKVIND+FGIVEGLMTTVH+
Sbjct: 119 ITAPSADAPMFVCGVNEKTYNPSINILSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHS 178
Query: 183 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
TATQKTVDGPS+KDWRGGR A+ NIIPSSTGAAKAVGKV+P LNGKLTGMAFRVPT DV
Sbjct: 179 YTATQKTVDGPSNKDWRGGRTAATNIIPSSTGAAKAVGKVIPDLNGKLTGMAFRVPTADV 238
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAG 302
SVVDLTVRL KPA YD+IKAA+K SEG+LKGIL Y E+++VS+DF GD+ SSIFDAKAG
Sbjct: 239 SVVDLTVRLAKPAKYDEIKAAVKAASEGELKGILAYTEDEVVSSDFIGDHHSSIFDAKAG 298
Query: 303 IALNDNFVKLVSWYDNEWGYSSRVVDLIRHMYN 335
I+LNDNFVKLVSWYDNE+GYS RV+DLI+H+++
Sbjct: 299 ISLNDNFVKLVSWYDNEFGYSCRVIDLIKHVHS 331
>AK108431
Length = 337
Score = 450 bits (1157), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/329 (65%), Positives = 261/329 (79%), Gaps = 1/329 (0%)
Query: 5 KIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHEVKVK 64
K+GINGFGRIGR+V R A Q+ V++VAVNDPFI Y YM +YD+ HGQ+K +++
Sbjct: 4 KVGINGFGRIGRIVFRNATQAGTVDVVAVNDPFIEVHYAAYMLRYDSTHGQFKG-TIEIN 62
Query: 65 DSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXXVVIS 124
++ L+ K++ + R+P IPWG+ GA++VVESTGVFT V+IS
Sbjct: 63 GTEGLIVNGKKIRFYAERDPAAIPWGKEGADYVVESTGVFTTTDKASAHIKGGAKKVIIS 122
Query: 125 APSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAIT 184
APS DAPMFV+GVN Y D++++SNASCTTNCLAPLAKVIND++G+VEGLMTTVH+ T
Sbjct: 123 APSADAPMFVMGVNNDSYTKDVNVLSNASCTTNCLAPLAKVINDKYGLVEGLMTTVHSYT 182
Query: 185 ATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 244
ATQKTVDGPS KDWRGGR A+ NIIPSSTGAAKAVGKV+P+LNGKLTGM+ RVPT +VSV
Sbjct: 183 ATQKTVDGPSGKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTANVSV 242
Query: 245 VDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAGIA 304
VDLT R+EK A+Y++IKA IK SE +LKGILGY E+D+VSTD GD+ SSIFDAKAGIA
Sbjct: 243 VDLTCRIEKGATYEEIKATIKAASENELKGILGYTEDDIVSTDLNGDDHSSIFDAKAGIA 302
Query: 305 LNDNFVKLVSWYDNEWGYSSRVVDLIRHM 333
LN NF+KLVSWYDNEWGYS RVVDLI ++
Sbjct: 303 LNANFIKLVSWYDNEWGYSHRVVDLISYI 331
>AK108644
Length = 333
Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/330 (66%), Positives = 258/330 (78%), Gaps = 2/330 (0%)
Query: 4 IKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHEVKV 63
+K+G+NGFGRIGRLV R A+ S V++VA+NDPFI +YM YMFKYD+ HG +K VK
Sbjct: 2 VKVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKG-TVKA 60
Query: 64 KDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXXVVI 123
++ K ++ G +T+F R+P I W + GAE+VVESTGVFT V+I
Sbjct: 61 ENGKLVINGH-AITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVII 119
Query: 124 SAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAI 183
SAPS DAPMFV+GVN ++Y + IVSNASCTTNCLAPLAKVI+D FGIVEGLMTTVHAI
Sbjct: 120 SAPSADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAI 179
Query: 184 TATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVS 243
TATQKTVDGPS K WR GR A+ NIIP+STGAAKAVGKV+P LNGKLTGMAFRVPT +VS
Sbjct: 180 TATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVS 239
Query: 244 VVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAGI 303
VVDLT RLEKPA YD IK +K ++G LKGILGY E+ +VS DF GD+ SS FDA AGI
Sbjct: 240 VVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDFNGDSHSSTFDAGAGI 299
Query: 304 ALNDNFVKLVSWYDNEWGYSSRVVDLIRHM 333
ALND+FVKLVSWYDNE+GYS+RVVDL+ HM
Sbjct: 300 ALNDHFVKLVSWYDNEFGYSNRVVDLMVHM 329
>Os03g0129300 Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
(Fragment)
Length = 444
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 214/334 (64%), Gaps = 9/334 (2%)
Query: 2 AKIKIGINGFGRIGRLVARVALQSDD--VELVAVNDPFITTDYMTYMFKYDTVHGQWKHH 59
AK+K+ INGFGRIGR R + ++ +E+V VND + +++ KYD++ G +K
Sbjct: 76 AKLKVAINGFGRIGRNFLRCWHERENSPLEVVVVNDSGGVRN-ASHLLKYDSMLGTFKA- 133
Query: 60 EVKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXX 119
+VK+ D +T+ K + V R+P ++PW E G + V+E TGVF
Sbjct: 134 DVKIVDDQTISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAK 193
Query: 120 XVVISAPSK--DAPMFVVGVNEKEYKPDI-DIVSNASCTTNCLAPLAKVINDRFGIVEGL 176
V+I+AP+K D P +V+GVNE +Y ++ +I+SNASCTTNCLAP K++++ FGIV+G
Sbjct: 194 KVIITAPAKGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKILDEEFGIVKGT 253
Query: 177 MTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFR 236
MTT H+ T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A R
Sbjct: 254 MTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPQLKGKLNGIALR 312
Query: 237 VPTVDVSVVDLTVRLEKPA-SYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSS 295
VPT +VSVVDL + K + D + AA ++ + G L GIL + LVS DF+ + SS
Sbjct: 313 VPTPNVSVVDLVINTVKTGITADDVNAAFRKAAAGPLSGILDVCDVPLVSVDFRCSDVSS 372
Query: 296 IFDAKAGIALNDNFVKLVSWYDNEWGYSSRVVDL 329
DA + + D+ VK+V+WYDNEWGYS RVVDL
Sbjct: 373 TIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 406
>AK109016
Length = 377
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/331 (46%), Positives = 209/331 (63%), Gaps = 7/331 (2%)
Query: 3 KIKIGINGFGRIGRLVARVALQSDD--VELVAVNDPFITTDYMTYMFKYDTVHGQWKHHE 60
KIK+ INGFGRIGR R D +++VA+ND +++ KYD+ G++ E
Sbjct: 41 KIKVAINGFGRIGRNFMRCLETRTDSLLDVVAINDSG-GVKQASHLLKYDSTLGKFDA-E 98
Query: 61 VKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXX 120
VKV D + K + V R+P ++PWG+ + V+E TGVF
Sbjct: 99 VKVVDDGHISVNGKVIRVVSSRDPTKLPWGDLDIDLVIEGTGVFIDTPGASKHIQAGAKK 158
Query: 121 VVISAPSK--DAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 178
V+I+AP+K D P +VVGVN +YK I+SNASCTTNCLAP KV++++FGIV+G MT
Sbjct: 159 VLITAPAKGSDIPTYVVGVNAHDYKHSDAIISNASCTTNCLAPFVKVLDEKFGIVKGTMT 218
Query: 179 TVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 238
T H+ T Q+ +D S +D R RAA+ NI+P++TGAAKAV VLP L GKL G+A RVP
Sbjct: 219 TTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTTTGAAKAVALVLPKLKGKLNGIALRVP 277
Query: 239 TVDVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFD 298
T +VSVVDL V++EK +++ A KE + G L G+L +E LVS DF+ + SS D
Sbjct: 278 TPNVSVVDLVVQVEKKTFAEEVNNAFKEAANGALNGVLAVGDEPLVSVDFRCTDVSSTID 337
Query: 299 AKAGIALNDNFVKLVSWYDNEWGYSSRVVDL 329
+ + + D+ VK+V+WYDNEWGYS RVVDL
Sbjct: 338 SSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 368
>Os04g0459500 Similar to GADPH (383 AA) (Fragment)
Length = 402
Score = 248 bits (632), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 149/332 (44%), Positives = 205/332 (61%), Gaps = 7/332 (2%)
Query: 2 AKIKIGINGFGRIGRLVARV---ALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKH 58
AK+K+ INGFGRIGR R S ++++A+ND +++ KYD+ G +
Sbjct: 65 AKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDA 123
Query: 59 HEVKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXX 118
V D+ + G K + V RNP +PWGE G + V+E TGVF
Sbjct: 124 DVKPVGDNAISVDG-KVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGA 182
Query: 119 XXVVISAPSK-DAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLM 177
V+I+AP K D P +VVGVN +Y PD I+SNASCTTNCLAP K+++ +FGI++G M
Sbjct: 183 KKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTM 242
Query: 178 TTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 237
TT H+ T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A RV
Sbjct: 243 TTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRV 301
Query: 238 PTVDVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIF 297
PT +VSVVDL V++ K +++ A ++ + +LKGIL + LVS DF+ + S
Sbjct: 302 PTPNVSVVDLVVQVSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTI 361
Query: 298 DAKAGIALNDNFVKLVSWYDNEWGYSSRVVDL 329
DA + + D+ VK+++WYDNEWGYS RVVDL
Sbjct: 362 DASLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 393
>D21280
Length = 95
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 80/92 (86%), Positives = 83/92 (90%)
Query: 7 GINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHEVKVKDS 66
GINGFGRIGRL ARVALQS+DVELVAVN PFITT YMTYMFKYDTVHGQWKHHEVKVKDS
Sbjct: 4 GINGFGRIGRLXARVALQSEDVELVAVNXPFITTXYMTYMFKYDTVHGQWKHHEVKVKDS 63
Query: 67 KTLLFGEKEVTVFGCRNPEEIPWGETGAEFVV 98
KTL+FG KEV VFGCRNPEEIPW GAE+V
Sbjct: 64 KTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVC 95
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,491,708
Number of extensions: 408977
Number of successful extensions: 960
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 943
Number of HSP's successfully gapped: 13
Length of query: 337
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 236
Effective length of database: 11,762,187
Effective search space: 2775876132
Effective search space used: 2775876132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)