BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0483500 Os04g0483500|AK060512
(318 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0483500 Similar to B-keto acyl reductase 548 e-156
Os11g0432600 Similar to Beta-keto acyl reductase (Fragment) 298 3e-81
Os02g0597900 Similar to B-keto acyl reductase (Beta-ketoacy... 252 3e-67
Os06g0299100 Glucose/ribitol dehydrogenase family protein 214 5e-56
Os06g0300200 205 3e-53
Os06g0299300 Glucose/ribitol dehydrogenase family protein 197 6e-51
Os04g0116600 Glucose/ribitol dehydrogenase family protein 196 2e-50
Os06g0299200 Glucose/ribitol dehydrogenase family protein 186 2e-47
Os06g0300000 Glucose/ribitol dehydrogenase family protein 179 2e-45
Os06g0298700 Glucose/ribitol dehydrogenase family protein 148 6e-36
>Os04g0483500 Similar to B-keto acyl reductase
Length = 318
Score = 548 bits (1412), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/318 (86%), Positives = 274/318 (86%)
Query: 1 MDALSAQPXXXXXXXXXXXXXXXXXSARLARWLYAAFLRPGKPLRRRYGEWAVVTGATDX 60
MDALSAQP SARLARWLYAAFLRPGKPLRRRYGEWAVVTGATD
Sbjct: 1 MDALSAQPAWALALAGVGLMVAATASARLARWLYAAFLRPGKPLRRRYGEWAVVTGATDG 60
Query: 61 XXXXXXXXXXXXXMSLVLVGRSPDKLAAVSGEIRGKHPRAEVRTFVLDFXXXXXXXXXXX 120
MSLVLVGRSPDKLAAVSGEIRGKHPRAEVRTFVLDF
Sbjct: 61 IGRALAFRFAGAGMSLVLVGRSPDKLAAVSGEIRGKHPRAEVRTFVLDFAAEGLAAKVAA 120
Query: 121 XXDSIRGLDVGVLVNSAGMSYPYARYFHEVDEELMRNLIRLNVEALTRVTHAVLPGMVER 180
DSIRGLDVGVLVNSAGMSYPYARYFHEVDEELMRNLIRLNVEALTRVTHAVLPGMVER
Sbjct: 121 LGDSIRGLDVGVLVNSAGMSYPYARYFHEVDEELMRNLIRLNVEALTRVTHAVLPGMVER 180
Query: 181 KRGAIVNIGSGASSILPSYPLYSVYAATKAYVDQFSRCLYVEYKNKGIDVQCQVPLYAAT 240
KRGAIVNIGSGASSILPSYPLYSVYAATKAYVDQFSRCLYVEYKNKGIDVQCQVPLYAAT
Sbjct: 181 KRGAIVNIGSGASSILPSYPLYSVYAATKAYVDQFSRCLYVEYKNKGIDVQCQVPLYAAT 240
Query: 241 KMASIKKASFFAPSPETYARAAVRYIGYEPRCTPYWPHAVLWFLISAFPEPIVDRLLLNM 300
KMASIKKASFFAPSPETYARAAVRYIGYEPRCTPYWPHAVLWFLISAFPEPIVDRLLLNM
Sbjct: 241 KMASIKKASFFAPSPETYARAAVRYIGYEPRCTPYWPHAVLWFLISAFPEPIVDRLLLNM 300
Query: 301 SVGIRKRGMAKDARKKTQ 318
SVGIRKRGMAKDARKKTQ
Sbjct: 301 SVGIRKRGMAKDARKKTQ 318
>Os11g0432600 Similar to Beta-keto acyl reductase (Fragment)
Length = 339
Score = 298 bits (763), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/288 (51%), Positives = 190/288 (65%), Gaps = 10/288 (3%)
Query: 32 WLYAAFLRPGKPLRRRYGEWAVVTGATDXXXXXXXXXXXXXXMSLVLVGRSPDKLAAVSG 91
WL AFLRPGK L RRYGEWAVVTGATD + LVLVGR+P KL+ V
Sbjct: 43 WLRRAFLRPGKGLCRRYGEWAVVTGATDGIGRAVALELARRGLHLVLVGRNPGKLSGVCK 102
Query: 92 EIRGKHPRAEVRTFVLDFXX--------XXXXXXXXXXXDSIRGLDVGVLVNSAGMSYPY 143
E+R P +VRT V D ++ GLDVG+LVN+AG +YP
Sbjct: 103 EVRAAAPACKVRTVVFDLAAPGDDDVGGGELSRGVARVAAAVEGLDVGLLVNNAGATYPC 162
Query: 144 ARYFHEVDEELMRNLIRLNVEALTRVTHAVLPGMVERKRGAIVNIGSGASSILPSYPLYS 203
A YFHEV + + ++R+NV A TR+ A++P M + RGA+VN+GSG+S ++P++PLY+
Sbjct: 163 AAYFHEVPDAVWEAVLRVNVVAATRIARALVPAMAAKGRGAVVNVGSGSSVVVPAFPLYA 222
Query: 204 VYAATKAYVDQFSRCLYVEYKNKGIDVQCQVPLYAATKMASIKKASFFAPSPETYARAAV 263
VYAATKAYVDQ SR L+VEYK+ G+DVQCQ+PLY ATKM+ ++ S F PSPE YA+AAV
Sbjct: 223 VYAATKAYVDQLSRSLHVEYKHHGVDVQCQIPLYVATKMSPVQGNSPFIPSPEEYAKAAV 282
Query: 264 RYIGYEPRCTPYWPHAVLWFLISAFPEPIVDRLLLNMSVGIRKRGMAK 311
R IGYEPRC PYW H++ WF S P+ +++ L + VGIRKR K
Sbjct: 283 RCIGYEPRCVPYWRHSIQWFFASLLPDSVLN--LWRLQVGIRKRNQMK 328
>Os02g0597900 Similar to B-keto acyl reductase (Beta-ketoacyl reductase)
Length = 147
Score = 252 bits (643), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 115/147 (78%), Positives = 132/147 (89%)
Query: 172 AVLPGMVERKRGAIVNIGSGASSILPSYPLYSVYAATKAYVDQFSRCLYVEYKNKGIDVQ 231
AVLP MVERKRGAIVNIGSG+SS++PS PLYSVYAATKAYVDQFSRCLYVEYK+KGIDVQ
Sbjct: 1 AVLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQ 60
Query: 232 CQVPLYAATKMASIKKASFFAPSPETYARAAVRYIGYEPRCTPYWPHAVLWFLISAFPEP 291
CQVPLY ATKMASI+K+SFF PS +TYARAA+R+IGYEPRCTPYWPH+V+WFLIS PE
Sbjct: 61 CQVPLYVATKMASIRKSSFFVPSADTYARAAIRHIGYEPRCTPYWPHSVMWFLISILPES 120
Query: 292 IVDRLLLNMSVGIRKRGMAKDARKKTQ 318
++D + L M + IRK+G AKDA+KK Q
Sbjct: 121 LIDSIRLGMCIKIRKKGQAKDAKKKAQ 147
>Os06g0299100 Glucose/ribitol dehydrogenase family protein
Length = 329
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 165/286 (57%), Gaps = 12/286 (4%)
Query: 34 YAAFLRPGKPLRRRYGEWAVVTGATDXXXXXXXXXXXXXXMSLVLVGRSPDKLAAVSGEI 93
Y A G RRYG WAV+TG T ++LVLVGR P +L +SG I
Sbjct: 44 YVAICLGGPKDLRRYGAWAVITGPTSGIGCAMALELARRGLNLVLVGRDPARLREISGTI 103
Query: 94 RGKHPRAEVRTFVLDFXXXXX---XXXXXXXXDSIRGLDVGVLVNSAGMSYPYARYFHEV 150
R +H R + + V D +++ GLDVGV+VN+A P A Y HE
Sbjct: 104 RSRHGRVQTKAVVFDLSLASTPDGDQPLRRLREAVAGLDVGVVVNNASEGRPGAVYLHEA 163
Query: 151 DEELMRNLIRLNVEALTRVTHAVLPGMVERKRG-AIVNIGSGASSILPSYPLYSVYAATK 209
D E + R+NV A+T VT AVLPGMVER RG A+VN+GS AS +PS+PLY++YA+TK
Sbjct: 164 DVEEWVRMARVNVSAVTEVTAAVLPGMVERGRGGAVVNLGSAASEAIPSFPLYTMYASTK 223
Query: 210 AYVDQFSRCLYVEYKNKGIDVQCQVPLYAATKM-ASIKKASFFAPSP-----ETYARAAV 263
YV QFSR L+VEY NKGI VQCQ P + T M A +++ + SP +TYARAAV
Sbjct: 224 RYVAQFSRSLHVEYANKGIHVQCQTPFFVETTMLAKLEEEVGLSVSPLKVSTDTYARAAV 283
Query: 264 RYIGY-EPRCTP-YWPHAVLWFLISAFPEPIVDRLLLNMSVGIRKR 307
+IG P CTP H ++W + +A PE ++D ++L + R R
Sbjct: 284 AWIGRGGPLCTPGGLLHQLMWCITAAVPESVLDWIVLRFTTWNRGR 329
>Os06g0300200
Length = 457
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 163/273 (59%), Gaps = 11/273 (4%)
Query: 39 RPGKPLRRRYGEWAVVTGATDXXXXXXXXXXXXXXMSLVLVGRSPDKLAAVSGEIRGKHP 98
RP LRRRYG WAVVTG T +++VLVGR P KL V+G I H
Sbjct: 34 RPRGDLRRRYGSWAVVTGPTSGIGRAMALELAGRGLNVVLVGRDPAKLRDVAGAIARSHS 93
Query: 99 RAEVRT--FVLDFXXXXXXX---XXXXXXDSIRGLDVGVLVNSAGMSYPYARYFHEVDEE 153
VRT V DF +++ GLDVGV+VN+AG++ P A + HEV+ E
Sbjct: 94 HHGVRTKTVVFDFSLVSTVQGEKAMAALRETVEGLDVGVVVNNAGVAKPGAMFLHEVEVE 153
Query: 154 LMRNLIRLNVEALTRVTHAVLPGMVERKRGAIVNIGSGASSILPSYPLYSVYAATKAYVD 213
+ +IR+N+ ALT+VT AVLPGMV R RGA+VNIGS ++ LPS+PLYSVYA TKAYV
Sbjct: 154 PLMRMIRVNMLALTKVTAAVLPGMVMRGRGAVVNIGSASAEALPSFPLYSVYAGTKAYVG 213
Query: 214 QFSRCLYVEYKNKGIDVQCQVPLYAATKMASIKKA----SFFAPSPETYARAAVRYIGYE 269
+FSR L VEYK KGIDVQCQVP T M S S F +PE YARAAVR IG+
Sbjct: 214 EFSRGLSVEYKRKGIDVQCQVPCLVETNMISRAMKDIFLSQFVVTPEEYARAAVRSIGHG 273
Query: 270 PRCTPYWPHAVLWFLISAFPEPIVD--RLLLNM 300
C P H V + + P+ +++ RL L++
Sbjct: 274 RMCVPNMAHRVQLLGMRSTPDFVLNWYRLRLHL 306
>Os06g0299300 Glucose/ribitol dehydrogenase family protein
Length = 330
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 163/278 (58%), Gaps = 10/278 (3%)
Query: 39 RPGKPLRRRYGEWAVVTGATDXXXXXXXXXXXXXXMSLVLVGRSPDKLAAVSGEIRGKHP 98
RP LRRRYGEWAVVTG T ++LVLVGR P L +SG +R H
Sbjct: 48 RPKDDLRRRYGEWAVVTGPTSGIGRAMALELARHGLNLVLVGRDPAILREISGTVRSLH- 106
Query: 99 RAEVRTFVLDFXXXXX---XXXXXXXXDSIRGLDVGVLVNSAGMSYPYARYFHEVDEELM 155
+ + +T V D +++ GLDVGV+VN+AG++ P A Y HE D E
Sbjct: 107 KVKTKTVVFDLSLVWTPDGDEPLRRLREAVEGLDVGVVVNNAGVAKPGAVYLHEADVEAW 166
Query: 156 RNLIRLNVEALTRVTHAVLPGMVERKRGAIVNIGSGASSILPSYPLYSVYAATKAYVDQF 215
++R+N+ A+T VT VLPGMV R RGAIVNIGS S +P+ PLY++YAATK YV QF
Sbjct: 167 VRMVRVNMSAVTEVTAVVLPGMVSRGRGAIVNIGSAGSEYIPTLPLYTMYAATKRYVAQF 226
Query: 216 SRCLYVEYKNKGIDVQCQVPLYAATKM-----ASIKKASFFAPSPETYARAAVRYIGY-E 269
SR L+VEY +KGI VQCQ P + T++ + S F +P+ YARAAV +IG
Sbjct: 227 SRSLHVEYASKGIHVQCQAPFFVDTRLMFRFEEAAGGVSLFTVTPDAYARAAVAWIGRGG 286
Query: 270 PRCTPYWPHAVLWFLISAFPEPIVDRLLLNMSVGIRKR 307
CTP H +L + +A P+ + D +LL ++ RKR
Sbjct: 287 ALCTPAVRHQLLRRMAAAAPDSVHDWILLRLATWNRKR 324
>Os04g0116600 Glucose/ribitol dehydrogenase family protein
Length = 319
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 150/265 (56%), Gaps = 9/265 (3%)
Query: 35 AAFLRPGKPLRRRYGEWAVVTGATDXXXXXXXXXXXXXXMSLVLVGRSPDKLAAVSGEIR 94
A +LR K LRR YGEWAVVTG T +LVL+ D L VS IR
Sbjct: 33 ALYLRRPKDLRRCYGEWAVVTGPTTGLGRSMAMELARRGFNLVLLDLDRDNLREVSEAIR 92
Query: 95 GKHPRA-EVRTFVLDFXXXXXXXXXXXXX---DSIRGLDVGVLVNSAGMSYPYARYFHEV 150
H A RT V D +++ G++VG+LVN+A ++ P A YFHE
Sbjct: 93 EAHAGAVATRTVVFDLSTVGTGAGEEGMRRLREAVDGVEVGMLVNNAAVARPGALYFHEA 152
Query: 151 DEELMRNLIRLNVEALTRVTHAVLPGMVERKRGAIVNIGSGASSILPSYPLYSVYAATKA 210
D E + +IR+N ALT VT AVLP M R RGAIVN+GSG++ +PS+PLY+VY++TK
Sbjct: 153 DVERLVAMIRVNAMALTAVTAAVLPAMARRGRGAIVNVGSGSTVAVPSFPLYTVYSSTKR 212
Query: 211 YVDQFSRCLYVEYKNKGIDVQCQVPLYAATKM--ASIKKASF---FAPSPETYARAAVRY 265
YV+Q S+ LYVEYK KGIDVQ QVP Y T M A+IK F + + Y RAA R+
Sbjct: 213 YVEQLSKSLYVEYKGKGIDVQLQVPFYVHTNMLSAAIKDRMLLPAFVATADDYTRAAARW 272
Query: 266 IGYEPRCTPYWPHAVLWFLISAFPE 290
+G+ P + WFL + P+
Sbjct: 273 VGHGHIAVPDAGQQLQWFLAAFVPD 297
>Os06g0299200 Glucose/ribitol dehydrogenase family protein
Length = 296
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 156/288 (54%), Gaps = 40/288 (13%)
Query: 28 RLARWLYAAFLR-PGKPLRRRYGEWAVVTGATDXXXXXXXXXXXXXXMSLVLVGRSPDKL 86
RL +L+ R P LRRRYGEWAVVTG T ++LVLVGR P L
Sbjct: 35 RLLAYLWLCLPRMPKGDLRRRYGEWAVVTGPTSGIGRAMALELARHGLNLVLVGRDPAIL 94
Query: 87 AAVSGEIRGKHPRAEVRTFVLDFXXXXXXXXXXXXXDSIRGLDVGVLVNSAGMSYPYARY 146
+S D+I L ++VN+AG++ P A Y
Sbjct: 95 RQIS--------------------------------DTIASLSELIVVNNAGVAEPGAVY 122
Query: 147 FHEVDEELMRNLIRLNVEALTRVTHAVLPGMVERKRG-AIVNIGSGASSILPSYPLYSVY 205
HE D E ++R+NV A+T VT AVLPGMV R RG A+VNIGS AS +PS PLY++Y
Sbjct: 123 LHEADVEAWARMVRVNVSAVTEVTAAVLPGMVARGRGGAVVNIGSAASESIPSLPLYTMY 182
Query: 206 AATKAYVDQFSRCLYVEYKNKGIDVQCQVPLYAATKM-----ASIKKASFFAPSPETYAR 260
++TK YV QFSR L+VEY +KGI VQCQ P T++ + S F +P+ YAR
Sbjct: 183 SSTKRYVAQFSRSLHVEYASKGIHVQCQAPFLVDTRLMFRFEEAAGGVSLFTVTPDAYAR 242
Query: 261 AAVRYIGY-EPRCTPYWPHAVLWFLISAFPEPIVDRLLLNMSVGIRKR 307
AAV +IG CTP H +L + +A P+ + D +LL+++ RKR
Sbjct: 243 AAVAWIGRGGALCTPGVRHQLLRRMAAAVPDSVHDWILLHLTTWNRKR 290
>Os06g0300000 Glucose/ribitol dehydrogenase family protein
Length = 365
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 160/288 (55%), Gaps = 28/288 (9%)
Query: 48 YGEWAVVTGATDXXXXXXXXXXXXXXMSLVLVGRSPDKLAAVSGEI-RGKHPRAEVRTFV 106
YG WAV+TG T ++LVLVGR P KL VS I + E R+ V
Sbjct: 59 YGAWAVITGPTSGIGRSVALELARRGLNLVLVGRDPAKLRDVSEAISKLGDGGVETRSVV 118
Query: 107 LDFXXXXXXXXXXXXX---DSIRGLDVGVLVNSAGMSYPYARYFHEVDEELMRNLIRLNV 163
D +++ GLDVGV+VN+AG++ P A Y HE + E +IR+N+
Sbjct: 119 FDLALASTAEGDEAVRRLREAVAGLDVGVVVNNAGVARPCAVYLHEAEAEAWVRMIRVNL 178
Query: 164 EALTRVTHAVLPGMVERKRGAIVNIGSGASSILPSYPLYSVYAATKAYVDQFSRCLYVEY 223
A+T VT AVLPGMV R RGA+VNIGSG++ +PS+PLYSVYAATK YV +FSR LYVEY
Sbjct: 179 WAVTEVTAAVLPGMVARGRGAVVNIGSGSTEAIPSFPLYSVYAATKRYVAEFSRSLYVEY 238
Query: 224 KNKGIDVQCQVPLYAATKMASIKK----------------------ASFFAPSPETYARA 261
K+KGIDVQCQ PL+ AT M S + F P+ + YA A
Sbjct: 239 KSKGIDVQCQAPLFVATNMTSGVAKAGGGGDDAAAKGSKRRQRRWLSPLFVPTADAYAAA 298
Query: 262 AVRYIGYEPRCTPYWPHAVLWFLISAFPEPIVDRLLLNMSVGIRKRGM 309
A R+IG+ C P H + W + A P+ + DR+ L + +R+R +
Sbjct: 299 AARWIGHGAVCMPNLCHRLQWCVSRAVPDAVHDRVRLREN--LRQRAL 344
>Os06g0298700 Glucose/ribitol dehydrogenase family protein
Length = 345
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 129/241 (53%), Gaps = 18/241 (7%)
Query: 28 RLARWLYAAFLRPGKPLRRRYGEWAVVTGATDXXXXXXXXXXXXXXMSLVLVGRSPDKLA 87
RL +L + R K LR RYG WAV+TG T ++LVLVGR P L
Sbjct: 38 RLLAYLAFSLHRQPKDLRSRYGAWAVITGPTSGMGRAMALELARRGLNLVLVGRDPANLE 97
Query: 88 AVSGEIRGKHPRAEVRTFVLDFXXXXXXXXXX---XXXDSIRGLDVGVLVNSAGMSYPYA 144
+S +R H E +T V D +++ GLDVGVL+N+AG+ P
Sbjct: 98 EISNTVRSLH-GVETKTVVFDLSLVATPHGDEPLRQLRETVEGLDVGVLMNNAGVGEPAM 156
Query: 145 RYFHEVDEELMRNLIRLNVEALTRVTHAVLPGMVERKRGAIVNIGSGASSILPSYPLYSV 204
Y HE D E ++R+N+ A+T VT AVLPGMVER RGA+VNIGS +S +PS+PL ++
Sbjct: 157 AYLHEADVEAWVRMMRVNLWAVTEVTAAVLPGMVERGRGAVVNIGSASSQAIPSFPLCTI 216
Query: 205 YAATKAYVDQFSRCLYVEYKNKGIDVQCQVPLYAATKM----ASIKKASFFAPSPETYAR 260
Y+ATK +V R ++ + + P + AT+M A ++ S F +P YAR
Sbjct: 217 YSATKRHV----RGSFLPEPSP------RAPFFVATRMVENLAEARRLSPFTVTPGAYAR 266
Query: 261 A 261
A
Sbjct: 267 A 267
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,854,865
Number of extensions: 320109
Number of successful extensions: 682
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 669
Number of HSP's successfully gapped: 10
Length of query: 318
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 217
Effective length of database: 11,762,187
Effective search space: 2552394579
Effective search space used: 2552394579
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 156 (64.7 bits)