BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0459500 Os04g0459500|AK071685
(402 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0459500 Similar to GADPH (383 AA) (Fragment) 705 0.0
Os03g0129300 Similar to Glyceraldehyde-3-phosphate dehydrog... 498 e-141
AK109016 489 e-138
AK108431 278 4e-75
Os06g0666600 Similar to Glyceraldehyde-3-phosphate dehydrog... 276 2e-74
Os02g0171100 Similar to Glyceraldehyde-3-phosphate dehydrog... 273 1e-73
Os04g0486600 Similar to Glyceraldehyde-3-phosphate dehydrog... 265 5e-71
Os02g0601300 Similar to Glyceraldehyde-3-phosphate dehydrog... 257 1e-68
AK109097 254 6e-68
Os08g0126300 Similar to Glyceraldehyde-3-phosphate dehydrog... 253 2e-67
AK100159 253 2e-67
AK108644 249 3e-66
>Os04g0459500 Similar to GADPH (383 AA) (Fragment)
Length = 402
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/402 (88%), Positives = 354/402 (88%)
Query: 1 MASPMLSAATVPLQXXXXXXXXXXXXXXXXXXXXNATSDDFMNAVSFRTHAVGTSGGARR 60
MASPMLSAATVPLQ NATSDDFMNAVSFRTHAVGTSGGARR
Sbjct: 1 MASPMLSAATVPLQGGGLSEFSGLRSSSSLPLRRNATSDDFMNAVSFRTHAVGTSGGARR 60
Query: 61 APTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTGGVKQASHLLKYDSTLGI 120
APTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTGGVKQASHLLKYDSTLGI
Sbjct: 61 APTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTGGVKQASHLLKYDSTLGI 120
Query: 121 FDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQA 180
FDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQA
Sbjct: 121 FDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQA 180
Query: 181 GAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKG 240
GAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKG
Sbjct: 181 GAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKG 240
Query: 241 TMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIALR 300
TMTTTHSYTGDQ NIVPTSTGAAKAVALVLPNLKGKLNGIALR
Sbjct: 241 TMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALR 300
Query: 301 VPTPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCT 360
VPTPN SKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCT
Sbjct: 301 VPTPNVSVVDLVVQVSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCT 360
Query: 361 IDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK 402
IDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK
Sbjct: 361 IDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK 402
>Os03g0129300 Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
(Fragment)
Length = 444
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/364 (70%), Positives = 286/364 (78%), Gaps = 4/364 (1%)
Query: 41 FMNAVSFRTHAVGTSGGARRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAIN 100
F + + + A T A RAP EAKLKVAINGFGRIGRNFLRCWH R ++SPL+V+ +N
Sbjct: 52 FSDVLGSQLVARATGENAVRAPAEAKLKVAINGFGRIGRNFLRCWHER-ENSPLEVVVVN 110
Query: 101 DTGGVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDL 160
D+GGV+ ASHLLKYDS LG F ADVK V D ISVDGK+IKVVS+R+P LPW ELGID+
Sbjct: 111 DSGGVRNASHLLKYDSMLGTFKADVKIVDDQTISVDGKLIKVVSNRDPLKLPWAELGIDI 170
Query: 161 VIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKG-DIPTYVVGVNADQYSPD-EPIISNAS 218
VIEGTGVFVD GAGKHIQAGAKKV+ITAP KG DIPTYV+GVN YS + IISNAS
Sbjct: 171 VIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVLGVNEGDYSHEVANIISNAS 230
Query: 219 CTTNCLAPFVKILDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTG 278
CTTNCLAPFVKILD++FGI+KGTMTTTHSYTGDQ NIVPTSTG
Sbjct: 231 CTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTG 290
Query: 279 AAKAVALVLPNLKGKLNGIALRVPTPNXXXXXXXXXXSKKTL-AEEVNQAFRDSAANELK 337
AAKAVALVLP LKGKLNGIALRVPTPN K + A++VN AFR +AA L
Sbjct: 291 AAKAVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVKTGITADDVNAAFRKAAAGPLS 350
Query: 338 GILEVCDVPLVSVDFRCSDVSCTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIV 397
GIL+VCDVPLVSVDFRCSDVS TIDASL+MVMGDDMVKV+AWYDNEWGYSQRVVDLA +V
Sbjct: 351 GILDVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLV 410
Query: 398 ANQW 401
A++W
Sbjct: 411 ASKW 414
>AK109016
Length = 377
Score = 489 bits (1258), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/348 (70%), Positives = 276/348 (79%), Gaps = 4/348 (1%)
Query: 56 GGARRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTGGVKQASHLLKYD 115
G + RA E K+KVAINGFGRIGRNF+RC R DS LDV+AIND+GGVKQASHLLKYD
Sbjct: 33 GSSIRA--EKKIKVAINGFGRIGRNFMRCLETRTDS-LLDVVAINDSGGVKQASHLLKYD 89
Query: 116 STLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAG 175
STLG FDA+VK V D ISV+GKVI+VVS R+P+ LPWG+L IDLVIEGTGVF+D GA
Sbjct: 90 STLGKFDAEVKVVDDGHISVNGKVIRVVSSRDPTKLPWGDLDIDLVIEGTGVFIDTPGAS 149
Query: 176 KHIQAGAKKVLITAPGKG-DIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQK 234
KHIQAGAKKVLITAP KG DIPTYVVGVNA Y + IISNASCTTNCLAPFVK+LD+K
Sbjct: 150 KHIQAGAKKVLITAPAKGSDIPTYVVGVNAHDYKHSDAIISNASCTTNCLAPFVKVLDEK 209
Query: 235 FGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGKL 294
FGI+KGTMTTTHSYTGDQ NIVPT+TGAAKAVALVLP LKGKL
Sbjct: 210 FGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTTTGAAKAVALVLPKLKGKL 269
Query: 295 NGIALRVPTPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRC 354
NGIALRVPTPN KKT AEEVN AF+++A L G+L V D PLVSVDFRC
Sbjct: 270 NGIALRVPTPNVSVVDLVVQVEKKTFAEEVNNAFKEAANGALNGVLAVGDEPLVSVDFRC 329
Query: 355 SDVSCTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK 402
+DVS TID+SL+MVMGDDMVKV+AWYDNEWGYSQRVVDLA++ A +W+
Sbjct: 330 TDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAELTAQKWE 377
>AK108431
Length = 337
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/333 (43%), Positives = 201/333 (60%), Gaps = 6/333 (1%)
Query: 68 KVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVK 126
KV INGFGRIGR R G +DV+A+ND V A+++L+YDST G F ++
Sbjct: 4 KVGINGFGRIGRIVFRNATQAG---TVDVVAVNDPFIEVHYAAYMLRYDSTHGQFKGTIE 60
Query: 127 PVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVL 186
G + V+GK I+ ++R+P+ +PWG+ G D V+E TGVF D A HI+ GAKKV+
Sbjct: 61 INGTEGLIVNGKKIRFYAERDPAAIPWGKEGADYVVESTGVFTTTDKASAHIKGGAKKVI 120
Query: 187 ITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMTTTH 246
I+AP D P +V+GVN D Y+ D ++SNASCTTNCLAP K+++ K+G+++G MTT H
Sbjct: 121 ISAP-SADAPMFVMGVNNDSYTKDVNVLSNASCTTNCLAPLAKVINDKYGLVEGLMTTVH 179
Query: 247 SYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPN 305
SYT Q NI+P+STGAAKAV V+P+L GKL G+++RVPT N
Sbjct: 180 SYTATQKTVDGPSGKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTAN 239
Query: 306 XXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTIDASL 365
K EE+ + ++ NELKGIL + +VS D D S DA
Sbjct: 240 VSVVDLTCRIEKGATYEEIKATIKAASENELKGILGYTEDDIVSTDLNGDDHSSIFDAKA 299
Query: 366 SMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 398
+ + + +K+++WYDNEWGYS RVVDL +A
Sbjct: 300 GIALNANFIKLVSWYDNEWGYSHRVVDLISYIA 332
>Os06g0666600 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 415
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 199/337 (59%), Gaps = 6/337 (1%)
Query: 59 RRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDST 117
++ + K KV INGFGRIGR LR R D ++V+A+ND K +++ KYDST
Sbjct: 72 HQSSSTEKTKVGINGFGRIGRLVLRIATNRDD---IEVVAVNDPFIDAKYMAYMFKYDST 128
Query: 118 LGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKH 177
G F +K V ++ + ++GK I V S R+PS++PWG G + V+E +GVF + A H
Sbjct: 129 HGPFKGTIKVVDESTLEINGKKISVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAH 188
Query: 178 IQAGAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGI 237
++ GA+KV+I+AP D P +VVGVN Y+P ++SNASCTTNCLAP KI+ ++FGI
Sbjct: 189 LKGGARKVVISAP-SADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAKIVHEEFGI 247
Query: 238 IKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNG 296
+G MTT H+ T Q NI+P+STGAAKAV VLP L GKL G
Sbjct: 248 AEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPALNGKLTG 307
Query: 297 IALRVPTPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSD 356
+A RVPTPN K E+V A ++++ LKGIL D +VS DF
Sbjct: 308 MAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKEASEGSLKGILGYTDEDVVSNDFIGDT 367
Query: 357 VSCTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 393
S DA + + +K+++WYDNEWGYS RV+DL
Sbjct: 368 RSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDL 404
>Os02g0171100 Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
(GAPDH)
Length = 411
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 195/330 (59%), Gaps = 6/330 (1%)
Query: 66 KLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDAD 124
K KV INGFGRIGR LR R D ++V+A+ND K +++ KYDST G F
Sbjct: 75 KTKVGINGFGRIGRLVLRIATSRDD---IEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGS 131
Query: 125 VKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKK 184
+K V D+ + ++GK + + S R+P+++PWG G + V+E +GVF + A H++ GAKK
Sbjct: 132 IKVVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKK 191
Query: 185 VLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMTT 244
V+I+AP D P +VVGVN Y P ++SNASCTTNCLAP K++ ++FGI++G MTT
Sbjct: 192 VVISAP-SADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMTT 250
Query: 245 THSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 303
H+ T Q NI+P+STGAAKAV VLP L GKL G+A RVPT
Sbjct: 251 VHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPT 310
Query: 304 PNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTIDA 363
PN K ++V A + ++ LKGIL D +VS DF S DA
Sbjct: 311 PNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDA 370
Query: 364 SLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 393
+ + +K+++WYDNEWGYS RV+DL
Sbjct: 371 KAGIGLSSSFMKLVSWYDNEWGYSNRVLDL 400
>Os04g0486600 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 337
Score = 265 bits (676), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/332 (43%), Positives = 196/332 (59%), Gaps = 7/332 (2%)
Query: 65 AKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDA 123
AK+K+ INGFGRIGR R S ++++A+ND +++ KYD+ G +
Sbjct: 2 AKIKIGINGFGRIGRLVARV---ALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKH 58
Query: 124 DVKPVGDNAISVDG-KVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGA 182
V D+ + G K + V RNP +PWGE G + V+E TGVF D+D A H++ GA
Sbjct: 59 HEVKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGA 118
Query: 183 KKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTM 242
KKV+I+AP K D P +VVGVN +Y PD I+SNASCTTNCLAP K+++ +FGI++G M
Sbjct: 119 KKVVISAPSK-DAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLM 177
Query: 243 TTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIALRV 301
TT H+ T Q NI+P+STGAAKAV VLP L GKL G+A RV
Sbjct: 178 TTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 237
Query: 302 PTPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTI 361
PT + K +++ A ++ + +LKGIL + LVS DF+ + S
Sbjct: 238 PTVDVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIF 297
Query: 362 DASLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 393
DA + + D+ VK+++WYDNEWGYS RVVDL
Sbjct: 298 DAKAGIALNDNFVKLVSWYDNEWGYSSRVVDL 329
>Os02g0601300 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 337
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/331 (41%), Positives = 191/331 (57%), Gaps = 7/331 (2%)
Query: 66 KLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDAD 124
K+K+ INGFGRIGR R S ++++A+ND + +++ KYD+ G +
Sbjct: 3 KIKIGINGFGRIGRLVARV---ALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHH 59
Query: 125 VKPVGDNAISVDG-KVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAK 183
V D+ + G K + V RNP +PW G + V+E TGVF D+D A H++ GAK
Sbjct: 60 EVKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGGAK 119
Query: 184 KVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMT 243
KV+I+AP K D P +VVGVN +Y D I+SNASCTTNCLAP K+++ +FGI++G MT
Sbjct: 120 KVVISAPSK-DAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 178
Query: 244 TTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIALRVP 302
T H+ T Q NI+P+STGAAKAV VLP L GKL G+A RVP
Sbjct: 179 TVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 238
Query: 303 TPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTID 362
T + K +++ A ++ A +LKGIL + LVS DF+ S D
Sbjct: 239 TVDVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFD 298
Query: 363 ASLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 393
A + + D VK+++WYDNEWGYS RV+DL
Sbjct: 299 AKAGIALSDTFVKLVSWYDNEWGYSTRVIDL 329
>AK109097
Length = 334
Score = 254 bits (650), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 192/327 (58%), Gaps = 8/327 (2%)
Query: 69 VAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKP 127
+ INGFGRIGR LR +G ++V+AIND + ++ KYDST G F D+
Sbjct: 5 IGINGFGRIGRIVLRAALEKG----VNVVAINDPFIPLDYMVYMFKYDSTHGRFKGDIHH 60
Query: 128 VGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLI 187
+ + V+G I V ++++P+ +PWG+ G + V+E GVF D HI GAKKV+I
Sbjct: 61 -ANGFLYVNGHQISVFTEKDPTQIPWGKSGAEYVVEAAGVFTTIDKCQAHITGGAKKVII 119
Query: 188 TAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMTTTHS 247
TAP D P +V GVN Y+P I+SNASCTTNCLAP K+++ KFGI++G MTT HS
Sbjct: 120 TAP-SADAPMFVCGVNEKTYNPSINILSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHS 178
Query: 248 YTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNX 306
YT Q NI+P+STGAAKAV V+P+L GKL G+A RVPT +
Sbjct: 179 YTATQKTVDGPSNKDWRGGRTAATNIIPSSTGAAKAVGKVIPDLNGKLTGMAFRVPTADV 238
Query: 307 XXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTIDASLS 366
+K +E+ A + ++ ELKGIL + +VS DF S DA
Sbjct: 239 SVVDLTVRLAKPAKYDEIKAAVKAASEGELKGILAYTEDEVVSSDFIGDHHSSIFDAKAG 298
Query: 367 MVMGDDMVKVIAWYDNEWGYSQRVVDL 393
+ + D+ VK+++WYDNE+GYS RV+DL
Sbjct: 299 ISLNDNFVKLVSWYDNEFGYSCRVIDL 325
>Os08g0126300 Similar to Glyceraldehyde-3-phosphate dehydrogenase (Fragment)
Length = 337
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/331 (41%), Positives = 191/331 (57%), Gaps = 7/331 (2%)
Query: 66 KLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIF-DA 123
K+K+ INGFGRIGR R S ++++A+ND +++ KYD+ G + +
Sbjct: 3 KIKIGINGFGRIGRLVARV---ALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHS 59
Query: 124 DVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAK 183
D+K + + K + V RNP +PW E G + V+E TGVF D++ A H++ GAK
Sbjct: 60 DIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAK 119
Query: 184 KVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMT 243
KV+I+AP K D P +V GVN D+Y+ D I+SNASCTTNCLAP K++ FGII+G MT
Sbjct: 120 KVVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMT 178
Query: 244 TTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIALRVP 302
T H+ T Q NI+P+STGAAKAV VLP+L GKL G++ RVP
Sbjct: 179 TVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVP 238
Query: 303 TPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTID 362
T + K + + A + ++ +LKGI+ + LVS DF S D
Sbjct: 239 TVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFD 298
Query: 363 ASLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 393
A + + D+ VK++AWYDNEWGYS RV+DL
Sbjct: 299 AKAGIALNDNFVKLVAWYDNEWGYSNRVIDL 329
>AK100159
Length = 337
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/331 (41%), Positives = 191/331 (57%), Gaps = 7/331 (2%)
Query: 66 KLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIF-DA 123
K+K+ INGFGRIGR R S ++++A+ND +++ KYD+ G + +
Sbjct: 3 KIKIGINGFGRIGRLVARV---ALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHS 59
Query: 124 DVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAK 183
D+K + + K + V RNP +PW E G + V+E TGVF D++ A H++ GAK
Sbjct: 60 DIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAK 119
Query: 184 KVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMT 243
KV+I+AP K D P +V GVN D+Y+ D I+SNASCTTNCLAP K++ FGII+G MT
Sbjct: 120 KVVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMT 178
Query: 244 TTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIALRVP 302
T H+ T Q NI+P+STGAAKAV VLP+L GKL G++ RVP
Sbjct: 179 TVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVP 238
Query: 303 TPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTID 362
T + K + + A + ++ +LKGI+ + LVS DF S D
Sbjct: 239 TVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFD 298
Query: 363 ASLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 393
A + + D+ VK++AWYDNEWGYS RV+DL
Sbjct: 299 AKAGIALNDNFVKLVAWYDNEWGYSNRVIDL 329
>AK108644
Length = 333
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 188/329 (57%), Gaps = 7/329 (2%)
Query: 67 LKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADV 125
+KV +NGFGRIGR R G + V+AIND + ++ KYDST G F V
Sbjct: 2 VKVGVNGFGRIGRLVTRAAVLSGK---VQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTV 58
Query: 126 KPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKV 185
K + + ++G I + +R+PSN+ W + G + V+E TGVF + AG H++ GAK+V
Sbjct: 59 K-AENGKLVINGHAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRV 117
Query: 186 LITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMTTT 245
+I+AP D P +V+GVN ++Y I+SNASCTTNCLAP K++ FGI++G MTT
Sbjct: 118 IISAP-SADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTV 176
Query: 246 HSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTP 304
H+ T Q NI+P STGAAKAV V+P L GKL G+A RVPTP
Sbjct: 177 HAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTP 236
Query: 305 NXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTIDAS 364
N K +++ + + +A LKGIL + +VS DF S T DA
Sbjct: 237 NVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDFNGDSHSSTFDAG 296
Query: 365 LSMVMGDDMVKVIAWYDNEWGYSQRVVDL 393
+ + D VK+++WYDNE+GYS RVVDL
Sbjct: 297 AGIALNDHFVKLVSWYDNEFGYSNRVVDL 325
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,472,123
Number of extensions: 522136
Number of successful extensions: 1018
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 979
Number of HSP's successfully gapped: 12
Length of query: 402
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 299
Effective length of database: 11,657,759
Effective search space: 3485669941
Effective search space used: 3485669941
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)