BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0269600 Os04g0269600|AK100640
(702 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0269600 Copper amine oxidase family protein 1346 0.0
Os06g0338200 Copper amine oxidase family protein 499 e-141
Os07g0572100 Similar to Amine oxidase like protein (EC 1.4.... 426 e-119
Os06g0338700 Copper amine oxidase family protein 406 e-113
Os04g0136200 190 3e-48
Os04g0476100 Similar to Peroxisomal copper-containing amine... 187 2e-47
Os04g0465366 143 4e-34
Os02g0593150 Copper amine oxidase family protein 90 7e-18
>Os04g0269600 Copper amine oxidase family protein
Length = 702
Score = 1346 bits (3484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/702 (92%), Positives = 652/702 (92%)
Query: 1 MDHSTSLLRLIFXXXXXXXXXXXXRSAFRLPGDIDTTTTSLFDDGNGGSCTRFSPWACRQ 60
MDHSTSLLRLIF RSAFRLPGDIDTTTTSLFDDGNGGSCTRFSPWACRQ
Sbjct: 1 MDHSTSLLRLIFLALGAALVVLVVRSAFRLPGDIDTTTTSLFDDGNGGSCTRFSPWACRQ 60
Query: 61 GRGDXXXXXXXXXXXXHESDVPRHPLDPLTXXXXXXXXXXXXAHPLFASAPSSLFVHSLE 120
GRGD HESDVPRHPLDPLT AHPLFASAPSSLFVHSLE
Sbjct: 61 GRGDPRSNPSNPRRPSHESDVPRHPLDPLTVREVNRVRELLRAHPLFASAPSSLFVHSLE 120
Query: 121 LDEPEKSVVKSWRKGXXXXXXXXXXXXXXFRGESHVLGVDLSEGDGAVTPLPVPASGYPM 180
LDEPEKSVVKSWRKG FRGESHVLGVDLSEGDGAVTPLPVPASGYPM
Sbjct: 121 LDEPEKSVVKSWRKGADPLPPRRAVAVVRFRGESHVLGVDLSEGDGAVTPLPVPASGYPM 180
Query: 181 MNMDEQTSLCFAPFKDEAFNASLLRRGVRASDVACLPISLGWYGPAEENRRLIKSQCFST 240
MNMDEQTSLCFAPFKDEAFNASLLRRGVRASDVACLPISLGWYGPAEENRRLIKSQCFST
Sbjct: 181 MNMDEQTSLCFAPFKDEAFNASLLRRGVRASDVACLPISLGWYGPAEENRRLIKSQCFST 240
Query: 241 EGTANFYMRPIEGLTVLVDMDTAEVLHVSDRGAGIPIPAAANTDYRHGHSAPTPAEAQAQ 300
EGTANFYMRPIEGLTVLVDMDTAEVLHVSDRGAGIPIPAAANTDYRHGHSAPTPAEAQAQ
Sbjct: 241 EGTANFYMRPIEGLTVLVDMDTAEVLHVSDRGAGIPIPAAANTDYRHGHSAPTPAEAQAQ 300
Query: 301 GRHGYQTDPATGEHRDVMYKGMASELFVPYMDPTEAWYFKTYMDAGEYGFGLQAMPLVPL 360
GRHGYQTDPATGEHRDVMYKGMASELFVPYMDPTEAWYFKTYMDAGEYGFGLQAMPLVPL
Sbjct: 301 GRHGYQTDPATGEHRDVMYKGMASELFVPYMDPTEAWYFKTYMDAGEYGFGLQAMPLVPL 360
Query: 361 NDCPRHARYLDAVFVAADGRPYVRENMICVFERYAGDIAWRHSESPITGMDIRESRPKVT 420
NDCPRHARYLDAVFVAADGRPYVRENMICVFERYAGDIAWRHSESPITGMDIRESRPKVT
Sbjct: 361 NDCPRHARYLDAVFVAADGRPYVRENMICVFERYAGDIAWRHSESPITGMDIRESRPKVT 420
Query: 421 LVARMAASVANYDYIVDWEFQMDGLVRIKVGLSGILMVKGTQYSHMNQVHQNDNMYGTLL 480
LVARMAASVANYDYIVDWEFQMDGLVRIKVGLSGILMVKGTQYSHMNQVHQNDNMYGTLL
Sbjct: 421 LVARMAASVANYDYIVDWEFQMDGLVRIKVGLSGILMVKGTQYSHMNQVHQNDNMYGTLL 480
Query: 481 SENVIGVIHDHFVTFRLDMDIDGADNSFVKVAMARQNTGAGESPRKSYLKATRHVARTEK 540
SENVIGVIHDHFVTFRLDMDIDGADNSFVKVAMARQNTGAGESPRKSYLKATRHVARTEK
Sbjct: 481 SENVIGVIHDHFVTFRLDMDIDGADNSFVKVAMARQNTGAGESPRKSYLKATRHVARTEK 540
Query: 541 DAQVRLKLYEPSEFHIVNPMKKTRVGNPVGYKVVPAGTAASLLDPEDPPQKRGAFTNNQI 600
DAQVRLKLYEPSEFHIVNPMKKTRVGNPVGYKVVPAGTAASLLDPEDPPQKRGAFTNNQI
Sbjct: 541 DAQVRLKLYEPSEFHIVNPMKKTRVGNPVGYKVVPAGTAASLLDPEDPPQKRGAFTNNQI 600
Query: 601 WVTPYNKTEEWAGGLFVYQSKGEDTLATWSERDRPIENKDLVLWYTLGFHHVPCQEDFPI 660
WVTPYNKTEEWAGGLFVYQSKGEDTLATWSERDRPIENKDLVLWYTLGFHHVPCQEDFPI
Sbjct: 601 WVTPYNKTEEWAGGLFVYQSKGEDTLATWSERDRPIENKDLVLWYTLGFHHVPCQEDFPI 660
Query: 661 MPTVSSSFDLKPVNFFESNPILGQRPTQENDLPVCAAAATTS 702
MPTVSSSFDLKPVNFFESNPILGQRPTQENDLPVCAAAATTS
Sbjct: 661 MPTVSSSFDLKPVNFFESNPILGQRPTQENDLPVCAAAATTS 702
>Os06g0338200 Copper amine oxidase family protein
Length = 698
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 276/675 (40%), Positives = 383/675 (56%), Gaps = 69/675 (10%)
Query: 84 HPLDPLTXXXXXXXXXXXXAHPLFASAPSSLFVHSLELDEPEKSVVKSWRKGXXXXXXXX 143
HPLDPLT A PL + P LF H + LDEP+K V S+ G
Sbjct: 28 HPLDPLTATEITAIRAAVLASPLVPARP--LFFHYVGLDEPDKPDVLSYAYGAADAAATS 85
Query: 144 XXXXXXFR--------GESHVLGVDLSEGDGAVTPLPV-PASGYPMMNMDEQTSLCFAPF 194
R G+SH VD++ + +V V G+PM ++Q + P+
Sbjct: 86 SQMTLPRRAFVIARAGGQSHEFTVDIAADNASVLSHAVHRGPGFPMFTDEDQIAAMALPY 145
Query: 195 KDEAFNASLLRRGVRASDVACLPISLGWYG---PAEENRRLIKSQCFSTE--GTANFYMR 249
F S+ RRG+ +V C +S GW+G PA R+ K +C + TAN Y R
Sbjct: 146 TYPPFVESVRRRGLDVGEVGCGVLSRGWFGAEQPAYGGARVAKMKCVVVDYNATANIYAR 205
Query: 250 PIEGLTVLVDMDTAEVLHVSDRGAGIPIPAAANTDYRH--------GHSAPTPAEAQAQG 301
P+EG+ ++VD+D ++ DR A +P A TDYR G +AP Q +G
Sbjct: 206 PVEGVVMVVDLDRMAIIGYRDR-AVFTVPKAEGTDYRADKVGPPFTGPAAPPGVVMQPEG 264
Query: 302 R----HGY---------------------------QTDPATGEHRDVMYKGMASELFVPY 330
R HG+ TD A G R V+Y+G SE+FVPY
Sbjct: 265 RGFHVHGHLVKWANWEFHVGFDMRAGTVISLASVNDTD-AGGLKRRVLYRGFVSEIFVPY 323
Query: 331 MDPTEAWYFKTYMDAGEYGFGLQAMPLVPLNDCPRHARYLDAVFVAADGRPYVRENMICV 390
MDP E WYF T+ DAGEYG G A L DCP +A Y+D + +DG+P E++IC+
Sbjct: 324 MDPEEEWYFHTFTDAGEYGLGALASQLQRGADCPANAVYMDGYYAGSDGKPVKAEDVICL 383
Query: 391 FERYAGDIAWRHSESPITGMDIRESRPKVTLVARMAASVANYDYIVDWEFQMDGLVRIKV 450
FERYAGD+AWRH+ G E RP VTLV RM +V NYDY +DWEF+ G ++I V
Sbjct: 384 FERYAGDVAWRHTNGIGLGGLFSEVRPDVTLVVRMVVTVGNYDYTLDWEFKTVGSIKIVV 443
Query: 451 GLSGILMVKGTQYSHMNQVHQNDNMYGTLLSENVIGVIHDHFVTFRLDMDIDGADNSFV- 509
LSGIL +K Y+H++Q+ + + +GTL++EN IGV HDHFVT+ LD+DIDG NSF+
Sbjct: 444 SLSGILEMKAINYTHVDQIRE--DTHGTLITENTIGVYHDHFVTYHLDLDIDGTRNSFIK 501
Query: 510 -----KVAMARQNTGAGESPRKSYLKATRHVARTEKDAQVRLKLYEPSEFHIVNPMKKTR 564
K + TG +PR+SY VA TE + QV + P++ VNP KK +
Sbjct: 502 NNIVPKCNTGVRATGGAPTPRRSYWTVLYEVAETEAEGQVNIN-SAPADLLFVNPSKKMK 560
Query: 565 VGNPVGYKVVPAG-TAASLLDPEDPPQKRGAFTNNQIWVTPYNKTEEWAGGLFVYQSKGE 623
+GN VGY+++P G TA SLL +D P++R ++T Q+WVTPYNK+E+WA GL+ QS G+
Sbjct: 561 IGNEVGYRLIPTGATATSLLADDDYPERRASYTKKQVWVTPYNKSEKWASGLYAEQSTGD 620
Query: 624 DTLATWSERDRPIENKDLVLWYTLGFHHVPCQEDFPIMPTVSSSFDLKPVNFFESNPILG 683
D LA WS+R+R I+++D+VLWYT+G HHVP QEDFP+MPT+S + +++P NFFE NP++
Sbjct: 621 DNLAAWSKRNRSIKDEDIVLWYTVGLHHVPYQEDFPVMPTISGALEVRPSNFFERNPLIR 680
Query: 684 QRPTQENDLPVCAAA 698
+P + + P C+ +
Sbjct: 681 TKPPENS--PNCSCS 693
>Os07g0572100 Similar to Amine oxidase like protein (EC 1.4.3.6) (Copper amine
oxidase)
Length = 446
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/395 (52%), Positives = 266/395 (67%), Gaps = 9/395 (2%)
Query: 315 RDVMYKGMASELFVPYMDPTEAWYFKTYMDAGEYGFGLQAMPLVPLNDCPRHARYLDAVF 374
R V+Y+G SE+FVPYMDP E WY++T++DAGEYG GL A PL P DCP +A YLD +
Sbjct: 51 RQVLYRGFVSEIFVPYMDPVEEWYYRTFLDAGEYGLGLWAFPLQPGGDCPANAAYLDGHY 110
Query: 375 VAADGRPYVRENMICVFERYAGDIAWRHSESPITGMDIRESRPKVTLVARMAASVANYDY 434
DGRP NMICVFERY+GD+AWRH+E+ I E RP V+LVARM S NYDY
Sbjct: 111 SGQDGRPVEARNMICVFERYSGDVAWRHTEAGFPNQLITEVRPDVSLVARMVVSAGNYDY 170
Query: 435 IVDWEFQMDGLVRIKVGLSGILMVKGTQYSHMNQVHQNDNMYGTLLSENVIGVIHDHFVT 494
I+DWEF+ G +++ V L+G+L VK T Y+H ++V Q + +GTL++EN I V HDH+VT
Sbjct: 171 ILDWEFKTSGSIKLVVSLTGLLEVKATAYAHADEVAQ--DAHGTLVAENTIAVYHDHYVT 228
Query: 495 FRLDMDIDGADNSFVK-----VAMARQNTGAGESPRKSYLKATRHVARTEKDAQVRLKLY 549
+ LD+D+DG +NSFVK V A ++PR+SY R VA E D QV L
Sbjct: 229 YHLDLDVDGTNNSFVKNIVTAVVRDADADAAADTPRRSYWTVRREVAEREADGQVDLGGG 288
Query: 550 EPSEFHIVNPMKKTRVGNPVGYKVVPAGT-AASLLDPEDPPQKRGAFTNNQIWVTPYNKT 608
P++ VNP KKTR+GN VGY+VVP G AAS+L +D PQ+R A+ Q+ VTPY+++
Sbjct: 289 APADLVFVNPGKKTRMGNEVGYRVVPGGAMAASVLADDDFPQRRAAYCKKQVRVTPYSRS 348
Query: 609 EEWAGGLFVYQSKGEDTLATWSERDRPIENKDLVLWYTLGFHHVPCQEDFPIMPTVSSSF 668
E+WA GL+ QS G D LA WSERDR I +D+VLWYT+G HHVP QEDFP+MPT+S
Sbjct: 349 EKWASGLYADQSTGGDGLAAWSERDRAIRGEDIVLWYTVGLHHVPYQEDFPVMPTLSGGL 408
Query: 669 DLKPVNFFESNPILGQRPTQEND-LPVCAAAATTS 702
+L+P NFFE NP+L P L C+ A S
Sbjct: 409 ELRPSNFFERNPLLTTMPIGHGRPLVNCSCAGGDS 443
>Os06g0338700 Copper amine oxidase family protein
Length = 594
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/574 (42%), Positives = 322/574 (56%), Gaps = 54/574 (9%)
Query: 84 HPLDPLTXXXXXXXXXXXXAHPLFASAPSSLFVHSLELDEPEK-SVVKSWRKGXXXXXXX 142
HPLDPL+ A L AS P S H + LDEPEK V+
Sbjct: 28 HPLDPLSPTELTAVRSAVLAFSLVASRPISF--HYVGLDEPEKPDVLSHTNAAAAAILPR 85
Query: 143 XXXXXXXFRGESHVLGVDLSEGDG--AVTPLPVPASGYPMMNMDEQTSLCFAPFKDEAFN 200
G SH VD++ V+ G+PM +EQ + + F
Sbjct: 86 RAFVIARAGGLSHEFYVDVTNTSAPRVVSHGIHDGPGFPMFTTEEQVAAGQLSREYPPFR 145
Query: 201 ASLLRRGVRASDVACLPISLGWYGPAEENRRLIKSQCFSTEG-TANFYMRPIEGLTVLVD 259
SL RRG+ ++V C S+GW+G E RRL K QCF G TAN+Y RP+EG+T+LVD
Sbjct: 146 ESLQRRGLALTNVGCGVFSMGWFG-KNEARRLAKVQCFIVAGGTANYYARPLEGVTLLVD 204
Query: 260 MDTAEVLHVSDRGAGIPIPAAANTDYRHGHSAP-----TPA-----EAQAQGRH------ 303
++ ++ DR A +P A TDYR G + P PA + + +G H
Sbjct: 205 VEKLVIVAYRDRAA-YSVPKAEGTDYRAGKARPPFNGAVPAPGVVVQPEGKGFHIDDHIV 263
Query: 304 ---------GYQTDPAT-----GEH-------RDVMYKGMASELFVPYMDPTEAWYFKTY 342
G+ T H R V+Y+G ASE+FVPYMDP E WYF T+
Sbjct: 264 RWANWEFHVGFDMRAGTVISMASVHDADADLWRRVLYRGFASEIFVPYMDPEEEWYFHTF 323
Query: 343 MDAGEYGFGLQAMPLVPLNDCPRHARYLDAVFVAADGRPYVRENMICVFERYAGDIAWRH 402
MDAGEYG G+ A+PL P D P +A Y+D +V ADG+P EN+ICVFERYAGDIAWRH
Sbjct: 324 MDAGEYGLGVSAVPLQPEADYPANAAYMDGYYVDADGKPVKSENIICVFERYAGDIAWRH 383
Query: 403 SESPITGMDIRESRPKVTLVARMAASVANYDYIVDWEFQMDGLVRIKVGLSGILMVKGTQ 462
+ I E RP VTLV RM +V NYDY +DWEF+ G ++ V LSGIL +K T
Sbjct: 384 TGVAGPIAPITEVRPDVTLVVRMVVTVGNYDYTLDWEFKTVGSIKTVVSLSGILEMKATN 443
Query: 463 YSHMNQVHQNDNMYGTLLSENVIGVIHDHFVTFRLDMDIDGADNSFVK-VAMARQNTGA- 520
Y+H++Q+ D+++GTL++EN +GV HDHF+T+ LD+DIDG NSF+K + ++NTG
Sbjct: 444 YTHVDQIR--DDIHGTLIAENTVGVYHDHFITYHLDLDIDGTKNSFIKNTIIPKRNTGVR 501
Query: 521 --GESPR-KSYLKATRHVARTEKDAQVRLKLYEPSEFHIVNPMKKTRVGNPVGYKVVPAG 577
G +P +SY VA TE + QV + P++ VNP KKT+VGN VGY+++PAG
Sbjct: 502 ATGGAPTPRSYWTVLYEVAETEAEGQVNIN-GAPADLLFVNPSKKTKVGNEVGYRLIPAG 560
Query: 578 -TAASLLDPEDPPQKRGAFTNNQIWVTPYNKTEE 610
TA SLL D PQ+R ++T Q+WVTPYNK+E+
Sbjct: 561 ATATSLLANNDYPQRRASYTKKQVWVTPYNKSEK 594
>Os04g0136200
Length = 819
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/523 (28%), Positives = 223/523 (42%), Gaps = 61/523 (11%)
Query: 199 FNASLLRRGVRASDVACL-PISLGWYGPAEE-NRRLIKSQCF----STEGTANFYMRPIE 252
F ++ +RG+ D+ + P G+Y A+ +RR+ K F S N Y RP+E
Sbjct: 257 FIEAMRKRGIDDMDLVTVDPWCAGYYSDADAPSRRIAKPLVFCRTESDNPIENGYARPVE 316
Query: 253 GLTVLVDMDTAEVLHVSDRGAGIPIPAAANT-DYRHGHS--------APTPAEAQAQG-- 301
G+ ++VDM V+ DR +P+P + + +Y G + Q QG
Sbjct: 317 GVHIIVDMQNNTVIEFEDRKL-VPLPPSDHLRNYTSGETRGGVDRTDVKPLVINQPQGPS 375
Query: 302 ---------------RHGYQTDPATGEH-----------RDVMYKGMASELFVPYMDPTE 335
R G+ H R + ++ E+ VPY DP E
Sbjct: 376 FHVNGYLVEWQKWNFRIGFTPKEGLVLHSVAYVDGNRGRRPIAHRLSFVEMVVPYGDPNE 435
Query: 336 AWYFKTYMDAGEYGFGLQAMPLVPLNDCPRHARYLDAVFVAADGRPYVRENMICVFERYA 395
Y K DAGE G G A L DC +Y DA F G EN +C+ E
Sbjct: 436 PHYRKNAFDAGEDGLGKNANSLKKGCDCLGVIKYFDAHFTNFTGGVETIENAVCLHEEDH 495
Query: 396 GDIAWRHSESPITGMDIRESRPKVTLVARMAASVANYDYIVDWEFQMDGLVRIKVGLSGI 455
G I W+H + ++R SR L ++ANY+Y W F DG + +V L+GI
Sbjct: 496 G-ILWKHRDWRTGLAEVRRSR---RLTVSFICTIANYEYGFYWHFYQDGKIEAEVKLTGI 551
Query: 456 LMVKGTQYSHMNQVHQNDNMYGTLLSENVIGVIHDHFVTFRLDMDIDG----ADNSFVKV 511
L V + YGT ++ ++ +H HF R+DM +D A N V+V
Sbjct: 552 LSVGALMPGEQRK-------YGTTIAPSLYAPVHQHFFVTRMDMAVDCKPNEAYNQVVEV 604
Query: 512 AMARQNTGAGESPRKSYLKATRHVARTEKDAQVRLKLYEPSEFHIVNPMKKTRVGNPVGY 571
+ + G ++ A + ++E A + + N R G P GY
Sbjct: 605 NVNTECAGPNNMHNNAFY-AEEKLLKSELQAMRDCHPSSARYWIVRNTRTVNRTGQPTGY 663
Query: 572 KVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKTEEWAGGLFVYQS-KGEDTLATWS 630
K++P L PE +R F + +WVT Y E + GG F Q+ + + LATW
Sbjct: 664 KLIPGSNCLPLALPEAKFLRRAGFLKHNLWVTSYKNDEMYPGGEFPNQNPRINEGLATWV 723
Query: 631 ERDRPIENKDLVLWYTLGFHHVPCQEDFPIMPTVSSSFDLKPV 673
++DR +E ++VLWY G HVP ED+P+MP F LK V
Sbjct: 724 KQDRSLEETNIVLWYVFGVTHVPRLEDWPVMPVEHIGFMLKIV 766
>Os04g0476100 Similar to Peroxisomal copper-containing amine oxidase
Length = 518
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/506 (29%), Positives = 212/506 (41%), Gaps = 63/506 (12%)
Query: 229 NRRLIKSQCF----STEGTANFYMRPIEGLTVLVDMDTAEVLHVSDRGAGIPIPAAANT- 283
+RRL K F S N Y RP+EG+ V+VDM V+ DR +P+P +
Sbjct: 4 SRRLGKPLIFCRTDSDSPMENGYARPVEGIHVIVDMQNNVVIEFEDRKL-VPLPPPDHLR 62
Query: 284 DYRHGHS--------------------------------------APTPAEAQAQGRHGY 305
+Y G + TP E Y
Sbjct: 63 NYTPGETRGGVDRSDLKPLIINQPEGPSFRINGYFVEWQKWNFRIGFTPKEGLVIYSVAY 122
Query: 306 QTDPATGEHRDVMYKGMASELFVPYMDPTEAWYFKTYMDAGEYGFGLQAMPLVPLNDCPR 365
D + G R + ++ E+ VPY DP E Y K DAGE G G A L DC
Sbjct: 123 -VDGSRGR-RPIAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKRGCDCLG 180
Query: 366 HARYLDAVFVAADGRPYVRENMICVFERYAGDIAWRHSESPITGMDIRESRPKVTLVARM 425
+Y DA F G EN +C+ E G I W+H + ++R SR L
Sbjct: 181 FIKYFDAHFTNFTGGVETIENCVCLHEEDHG-ILWKHQDWRTGLAEVRRSR---RLTVSF 236
Query: 426 AASVANYDYIVDWEFQMDGLVRIKVGLSGILMVKGTQYSHMNQVHQNDNMYGTLLSENVI 485
+VANY+Y W F DG + +V L+GIL + + YGT ++ +
Sbjct: 237 ICTVANYEYGFYWHFYQDGKIEAEVKLTGILSLGALMPGESRK-------YGTTIAPGLY 289
Query: 486 GVIHDHFVTFRLDMDIDG----ADNSFVKVAMARQNTGAGESPRKSYLKATRHVARTEKD 541
+H HF R+DM +D A N V+V + +N G ++ A + ++E
Sbjct: 290 APVHQHFFVARMDMAVDCKPNEAHNQVVEVNVKVENAGTHNVHNNAFY-AEEKLLKSELQ 348
Query: 542 AQVRLKLYEPSEFHIVNPMKKTRVGNPVGYKVVPAGTAASLLDPEDPPQKRGAFTNNQIW 601
A + + N R G P GY++VP L PE +R F + +W
Sbjct: 349 AMRDCDPSSARHWIVRNTRAVNRTGQPTGYRLVPGSNCLPLALPEAKFLRRAGFLKHNLW 408
Query: 602 VTPYNKTEEWAGGLFVYQS-KGEDTLATWSERDRPIENKDLVLWYTLGFHHVPCQEDFPI 660
VT Y E + GG F Q+ + + LATW ++DRP+E D+VLWY G H+P ED+P+
Sbjct: 409 VTQYKSDEVFPGGEFPNQNPRIHEGLATWVKKDRPLEETDIVLWYVFGLTHIPRLEDWPV 468
Query: 661 MPTVSSSFDLKPVNFFESNPILGQRP 686
MP F L P FF +P + P
Sbjct: 469 MPVERIGFMLMPHGFFNCSPAVDVPP 494
>Os04g0465366
Length = 141
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 87/118 (73%), Gaps = 5/118 (4%)
Query: 104 HPLFASAPSSLFVHSLELDEPEKSVVKSWRKGXXXXXXXXXXXXXXFRGESHVLGVDLSE 163
H L + ++LF+HSL+LDEPEKSVVKSWRKG FRG+S VLG E
Sbjct: 29 HWLALRSGANLFMHSLKLDEPEKSVVKSWRKGANPLPPRCTVVVIRFRGKSRVLG----E 84
Query: 164 GDGAVTPLPVPASGYPMMNMDEQTSLCFAPFKDEAFNASLLRRGVRASDVACLPISLG 221
G+G VTPL VPASGYPMM+MDEQTSL FA FKD AFNAS +RRGVRASDVACLPIS G
Sbjct: 85 GNGVVTPLHVPASGYPMMSMDEQTSLSFALFKDVAFNAS-IRRGVRASDVACLPISFG 141
>Os02g0593150 Copper amine oxidase family protein
Length = 311
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 556 IVNPMKKTRVGNPVGYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKTEEWAGGL 615
+ N R G P GYK+VP + L PE +R F + +WVT + E + GG
Sbjct: 28 VRNTRTVNRTGQPTGYKLVPGSSCLPLALPEAKFLRRAGFLKHNLWVTSFKNDEMFPGGE 87
Query: 616 FVYQS-KGEDTLATWSERDRPIENKDLVLWYTLGFHHVPCQEDFPIMPTVSSSFDL 670
F Q+ + + LATW ++DR +E +LVLWY G H+P ED+P+MP SF L
Sbjct: 88 FPNQNPRINEGLATWVKKDRSLEETNLVLWYVFGITHIPRLEDWPVMPVERISFML 143
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 25,204,440
Number of extensions: 1119744
Number of successful extensions: 2067
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 2036
Number of HSP's successfully gapped: 9
Length of query: 702
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 594
Effective length of database: 11,396,689
Effective search space: 6769633266
Effective search space used: 6769633266
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)