Os04g0269600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Copper amine oxidase family protein.
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Os04g0269600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Copper amine oxidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48 | 0.326 | 13.2 | 0.562 | 1.06 | 0.326 | -0.482 | 2.33 | 0.18 | 18.5 | 80.24 | 1490 | -- | -- |
| 48.84 | 0.325 | 13.2 | 0.765 | 1.05 | 0.399 | -0.385 | -- | 0.318 | 18.5 | 77 | 23018 | -- | -- |
| 48.51 | 0.324 | 13.2 | 0.574 | 1.07 | 0.334 | -- | 2.37 | 0.178 | 18.5 | 79.99 | 1564 | -- | -- |
| 47.26 | 0.32 | 13.2 | 0.599 | 1.08 | 0.619 | -- | -- | 0.299 | 18.6 | 76 | 24869 | -- | -- |
| 105.34 | 0.478 | 13.2 | 0.547 | -- | 0.517 | -- | 2.29 | 0.16 | -- | 81 | 1369 | -- | -- |
| 54.94 | 0.347 | 13.2 | 0.737 | 1.07 | -- | -0.409 | -- | 0.192 | 18.5 | -- | -- | -- | -- |
| 55.35 | 0.348 | 13.2 | 0.743 | 1.07 | -- | -- | -- | 0.191 | 18.6 | -- | -- | -- | -- |
| 106.93 | 0.482 | 13.2 | 0.563 | -- | 0.622 | -- | -- | 0.304 | -- | 76 | 24446 | -- | -- |
| 56.68 | 0.351 | 13.2 | -- | 1.06 | 0.957 | -- | -- | 0.174 | 18.6 | 71.29 | 47520 | -- | -- |
| 114.87 | 0.501 | 13.2 | 0.717 | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
| 69.88 | 0.391 | 13.2 | -- | 1.06 | -- | -- | -- | 0.108 | 18.6 | -- | -- | -- | -- |
| 114.63 | 0.499 | 13.2 | -- | -- | 0.8 | -- | -- | 0.0851 | -- | 66.27 | 47520 | -- | -- |
| 128.41 | 0.529 | 13.2 | -- | -- | -- | -- | -- | 0.0895 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.22 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 2 | 44.56 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 3 | 45.36 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 45.80 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 8 | 45.94 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 12 | 46.18 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 13 | 46.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 14 | 46.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 15 | 46.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 19 | 46.33 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 32 | 46.44 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 36 | 46.51 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 45 | 46.60 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 77 | 46.83 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 94 | 46.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 95 | 46.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 101 | 46.99 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 102 | 46.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 120 | 47.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 130 | 47.13 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 135 | 47.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 20 |
| 136 | 47.15 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 20 |
| 138 | 47.15 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 20 |
| 142 | 47.17 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 19 |
| 146 | 47.20 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 9 |
| 164 | 47.30 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 168 | 47.33 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 20 | 6 |
| 171 | 47.34 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 173 | 47.34 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 176 | 47.36 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 184 | 47.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 218 | 47.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 220 | 47.47 | temperature | 30.0 | 90 | < th | dose independent | rect. | 6 | 11 |
| 221 | 47.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 234 | 47.51 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 239 | 47.52 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 241 | 47.53 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 253 | 47.56 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 282 | 47.59 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 317 | 47.65 | humidity | 90.0 | 720 | > th | dose independent | rect. | 6 | 18 |
| 365 | 47.71 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 375 | 47.72 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 380 | 47.72 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 8 |
| 396 | 47.74 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 398 | 47.74 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 17 |
| 408 | 47.75 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 419 | 47.77 | humidity | 80.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 440 | 47.78 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 447 | 47.78 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 19 | 22 |
| 459 | 47.79 | humidity | 90.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 477 | 47.81 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 8 |
| 487 | 47.81 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 8 |
| 494 | 47.82 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 503 | 47.83 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 17 |
| 506 | 47.83 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 508 | 47.83 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 526 | 47.85 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 15 |
| 527 | 47.85 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 528 | 47.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 547 | 47.87 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 615 | 47.92 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 617 | 47.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 638 | 47.93 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 12 |
| 647 | 47.94 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 21 |
| 657 | 47.95 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 669 | 47.95 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 677 | 47.95 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 14 |
| 687 | 47.96 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 16 |
| 709 | 47.97 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 713 | 47.98 | humidity | 80.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 714 | 47.98 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 744 | 47.99 | humidity | 70.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 756 | 48.00 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 16 |
| 770 | 48.00 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 16 |
| 823 | 48.03 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 832 | 48.04 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 855 | 48.05 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 877 | 48.05 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 22 |
| 896 | 48.07 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 923 | 48.08 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 954 | 48.10 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 958 | 48.10 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 13 |
| 965 | 48.10 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 13 | 13 |
| 974 | 48.10 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 997 | 48.12 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 8 | 1 |