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Os07g0572100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Amine oxidase like protein (EC 1.4.3.6) (Copper amine oxidase).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.85 (0.0336) R2 : 0.932
β1 : -- (--) R2dD : -- R2D : --
β2 : 8.33 (0.122) R2dC : 1.38 R2C : 0.812
β3 : 3.67 (0.186) R2dE : 0.122 R2E : -0.455
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.653 (0.0749) R2dN8 : 0.0175 R2N8 : -0.0164
σ : 0.625
deviance : 180.07
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C
peak time of C : 17
E
wheather : temperature
threshold : 30.05
memory length : 207
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 21.5
open length of G : 15.8

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
170.58 0.614 7.86 0.111 8.28 3.77 2.38 0.578 0.671 17.1 30.57 257 21.1 17.3
170.8 0.609 7.86 0.173 8.27 3.72 2.05 -- 0.677 17.1 30.68 244 21.2 17.3
176.47 0.619 7.83 0.404 8.34 3.68 -- -1.38 0.764 17.1 30.35 209 21.4 15.8
179.93 0.625 7.82 0.261 8.34 3.75 -- -- 0.736 17 30.09 212 21.4 16.2
1041.01 1.5 7.78 -4.67 -- 5.84 -- 4.72 -0.0105 -- 72.55 674 2.4 18.1
305.92 0.82 7.96 -0.536 6.59 -- 2.01 -- 0.0658 16.9 -- -- -- --
316.33 0.833 7.95 -0.529 6.61 -- -- -- 0.0759 16.9 -- -- -- --
257.35 0.747 7.79 0.0142 -- 7.92 -- -- 0.33 -- 96.12 724 3.13 15.7
180.07 0.625 7.85 -- 8.33 3.67 -- -- 0.653 17 30.05 207 21.5 15.8
2620.74 2.39 7.88 -0.775 -- -- -- -- -0.095 -- -- -- -- --
323.72 0.842 7.94 -- 6.62 -- -- -- 0.135 16.8 -- -- -- --
254.93 0.744 7.77 -- -- 8.17 -- -- 0.395 -- 86.15 717 3.32 15.6
2636.57 2.4 7.87 -- -- -- -- -- -0.00907 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 171.03 temperature 30 270 < th dose dependent rect. 21 17
3 172.12 temperature 30 270 < th dose dependent rect. 21 14
6 176.61 temperature 30 90 < th dose dependent rect. 23 16
14 178.30 temperature 30 10 < th dose dependent rect. 22 16
34 182.16 temperature 30 10 < th dose dependent rect. 22 14
38 182.41 temperature 10 720 > th dose dependent rect. 19 17
60 185.21 temperature 30 10 < th dose dependent rect. 22 21
62 185.42 temperature 10 720 > th dose dependent rect. 18 13
75 186.53 temperature 25 720 < th dose dependent rect. 17 18
104 187.10 temperature 25 720 < th dose dependent sin 11 NA
186 189.38 temperature 10 720 > th dose dependent sin 10 NA
225 190.99 temperature 25 720 < th dose dependent rect. 20 9
251 191.50 temperature 25 720 < th dose dependent no NA NA
252 191.50 temperature 25 720 < th dose dependent rect. 9 23
267 191.91 temperature 25 720 < th dose dependent rect. 3 23
268 191.93 temperature 25 720 < th dose dependent rect. 21 6
270 191.95 temperature 25 720 < th dose dependent rect. 6 23
300 192.65 temperature 25 720 < th dose dependent rect. 1 23
307 192.90 temperature 25 720 < th dose dependent rect. 23 2
461 197.75 temperature 30 10 < th dose dependent rect. 20 23
497 198.84 temperature 30 10 < th dose dependent rect. 7 23
525 199.89 temperature 10 720 > th dose dependent rect. 23 7
653 202.41 temperature 10 10 > th dose dependent sin 6 NA
718 203.90 temperature 10 720 > th dose dependent rect. 10 21
739 204.21 temperature 30 30 < th dose dependent sin 6 NA
759 204.63 temperature 25 1440 < th dose dependent rect. 4 8
887 206.93 temperature 10 1440 > th dose dependent rect. 3 9
912 207.40 temperature 10 10 > th dose dependent no NA NA
947 207.79 temperature 10 1440 > th dose dependent rect. 23 13