BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0850400 Os03g0850400|AK121930
(482 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0850400 Similar to Aspartate kinase precursor (EC 2.7.... 970 0.0
Os07g0300900 Similar to Lysine-sensitive aspartate kinase 838 0.0
Os01g0927900 Similar to Aspartate kinase precursor (EC 2.7.... 795 0.0
Os09g0294000 Similar to Bifunctional aspartokinase/homoseri... 167 2e-41
Os08g0342400 Similar to Bifunctional aspartokinase/homoseri... 144 2e-34
>Os03g0850400 Similar to Aspartate kinase precursor (EC 2.7.2.4)
Length = 482
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/482 (98%), Positives = 473/482 (98%)
Query: 1 MKFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASE 60
MKFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASE
Sbjct: 1 MKFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASE 60
Query: 61 IPELAVIKELHVRTIDELGLDRSIVSGXXXXXXXXXKGVAMMKELTPRTRDYLVSFGECM 120
IPELAVIKELHVRTIDELGLDRSIVSG KGVAMMKELTPRTRDYLVSFGECM
Sbjct: 61 IPELAVIKELHVRTIDELGLDRSIVSGLLEELEQLLKGVAMMKELTPRTRDYLVSFGECM 120
Query: 121 STRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPAIP 180
STRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPAIP
Sbjct: 121 STRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPAIP 180
Query: 181 IVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICANAI 240
IVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICANAI
Sbjct: 181 IVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICANAI 240
Query: 241 PVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITKTRDLSKS 300
PVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITKTRDLSKS
Sbjct: 241 PVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITKTRDLSKS 300
Query: 301 ILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSK 360
ILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSK
Sbjct: 301 ILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSK 360
Query: 361 LWCRELIQQELDHVVEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRRNGVNV 420
LWCRELIQQELDHVVEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRRNGVNV
Sbjct: 361 LWCRELIQQELDHVVEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRRNGVNV 420
Query: 421 QMISQGASKVNISLVVHDSEAKQCIQALHSAFFENGFLSEVEEEDLQHNGSPVSPNGVIY 480
QMISQGASKVNISLVVHDSEAKQCIQALHSAFFENGFLSEVEEEDLQHNGSPVSPNGVIY
Sbjct: 421 QMISQGASKVNISLVVHDSEAKQCIQALHSAFFENGFLSEVEEEDLQHNGSPVSPNGVIY 480
Query: 481 GN 482
GN
Sbjct: 481 GN 482
>Os07g0300900 Similar to Lysine-sensitive aspartate kinase
Length = 575
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/482 (85%), Positives = 435/482 (90%), Gaps = 4/482 (0%)
Query: 1 MKFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASE 60
MKFGGSSVASAERMREVADLILSFPEE PV+VLSAMGKTTN LL+AGEKAV CGA SE
Sbjct: 94 MKFGGSSVASAERMREVADLILSFPEERPVIVLSAMGKTTNKLLMAGEKAVGCGATNVSE 153
Query: 61 IPELAVIKELHVRTIDELGLDRSIVSGXXXXXXXXXKGVAMMKELTPRTRDYLVSFGECM 120
+ EL IKELH TID+LGLDRSIVSG KG+AMMKELT RTRDYLVSFGECM
Sbjct: 154 LDELTFIKELHFGTIDQLGLDRSIVSGLSDELEQLLKGIAMMKELTLRTRDYLVSFGECM 213
Query: 121 STRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPAIP 180
STRIFAA LNKLG KARQYDAF+IGFITTDDFTNADILEATYPA+AKRL GDW+ PAIP
Sbjct: 214 STRIFAALLNKLGVKARQYDAFEIGFITTDDFTNADILEATYPAIAKRLHGDWVTGPAIP 273
Query: 181 IVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICANAI 240
IVTGFLGKGWK+ A+TTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNI NA
Sbjct: 274 IVTGFLGKGWKTGAITTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNIHPNAK 333
Query: 241 PVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITKTRDLSKS 300
PVPYLTF+EAAELAYFGAQVLHPQSMRPA+EGDIPVRVKNSYNRRAPGT+ITK RD+SK+
Sbjct: 334 PVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNRRAPGTLITKARDMSKT 393
Query: 301 ILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSK 360
+LTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSK
Sbjct: 394 VLTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSK 453
Query: 361 LWCRELIQQ--ELDHVVEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRRNGV 418
LW RELI+Q ELDHV+EELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLR NGV
Sbjct: 454 LWSRELIKQANELDHVIEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRTNGV 513
Query: 419 NVQMISQGASKVNISLVVHDSEAKQCIQALHSAFFENGFLSEVEEEDLQHNGSPVSPNGV 478
NVQMISQGASKVNISLVVHDSEAKQC+QALHSAFFE+GFL EV D+ + S NG
Sbjct: 514 NVQMISQGASKVNISLVVHDSEAKQCVQALHSAFFESGFLPEV--NDILQDDSVAHSNGT 571
Query: 479 IY 480
+Y
Sbjct: 572 VY 573
>Os01g0927900 Similar to Aspartate kinase precursor (EC 2.7.2.4)
Length = 570
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/467 (82%), Positives = 420/467 (89%)
Query: 1 MKFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASE 60
MKFGGSSV+SA RMREVA LIL+FPEE PVVVLSAMGKTTN LLLAGEKAV CG + SE
Sbjct: 102 MKFGGSSVSSAARMREVAGLILAFPEERPVVVLSAMGKTTNLLLLAGEKAVGCGVIRVSE 161
Query: 61 IPELAVIKELHVRTIDELGLDRSIVSGXXXXXXXXXKGVAMMKELTPRTRDYLVSFGECM 120
I E +IK+LH++T++EL L RS++ KG+AMMKELT RT DYLVSFGECM
Sbjct: 162 IEEWNLIKDLHIKTVEELALPRSVIHTMLDELEQLLKGIAMMKELTLRTTDYLVSFGECM 221
Query: 121 STRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPAIP 180
STRIFAAYLNK+G KARQYDAFDIGFITTDDF NADILEATYPAVAKRL GDWI DPAIP
Sbjct: 222 STRIFAAYLNKIGVKARQYDAFDIGFITTDDFGNADILEATYPAVAKRLHGDWIRDPAIP 281
Query: 181 IVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICANAI 240
IVTGFLGKGWKS AVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNI NA
Sbjct: 282 IVTGFLGKGWKSGAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNIYPNAT 341
Query: 241 PVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITKTRDLSKS 300
VPYLTFEEAAELAYFGAQVLHPQSMRPA+EGDIPVRVKNSYN +APGT+ITK R++ K
Sbjct: 342 TVPYLTFEEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPKAPGTLITKQREMDKV 401
Query: 301 ILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSK 360
+LTSIVLKSN+TMLDIVSTRMLGQ+GFLAKVFSIFEDLGISVDCVATSEVSIS++LDPSK
Sbjct: 402 VLTSIVLKSNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDCVATSEVSISVSLDPSK 461
Query: 361 LWCRELIQQELDHVVEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRRNGVNV 420
+W RELIQQELDHVVEELEKIAVVHLLQ R+IISLIGNV+RSSLILEKAF VLR++GVNV
Sbjct: 462 IWSRELIQQELDHVVEELEKIAVVHLLQQRAIISLIGNVRRSSLILEKAFQVLRKSGVNV 521
Query: 421 QMISQGASKVNISLVVHDSEAKQCIQALHSAFFENGFLSEVEEEDLQ 467
QMISQGASKVN+SL+VHDSEAKQCI+ALH AFFE+ L+EVEEE L
Sbjct: 522 QMISQGASKVNMSLIVHDSEAKQCIKALHQAFFEDDVLTEVEEEALH 568
>Os09g0294000 Similar to Bifunctional aspartokinase/homoserine dehydrogenase 2,
chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes:
Aspartokinase (EC 2.7.2.4)
Length = 915
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 239/481 (49%), Gaps = 51/481 (10%)
Query: 2 KFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASEI 61
KFGG+ + + +R++ VAD++L E ++++SAM K T+ + KA S + +
Sbjct: 93 KFGGTCMGTPQRIQNVADIVLGDSSERKLIIVSAMSKVTDMMFNLVHKAQSRDNSYVTAL 152
Query: 62 PE-----LAVIKELHVRTIDELGLDRSI--VSGXXXXXXXXXKGVAMMKELTPRTRDYLV 114
E +A KEL +D L R + + + + + T D++V
Sbjct: 153 DEVFNKHMAAAKEL----LDGEDLARFLAQLHSDISNLRAMLRAIFIAGHATESFSDFVV 208
Query: 115 SFGECMSTRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWI 174
GE S ++ + + K G D ++ + + ++ ++ Y KRLQ +
Sbjct: 209 GHGELWSAQMLSYAIKKSGVPCSWMDTREVLVVKP---SGSNQVDPDYLESEKRLQKWFS 265
Query: 175 DDPA-IPIVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDP 233
PA I I TGF+ ++ TTL R GSD +A+ IG + ++ +W DVDGV + DP
Sbjct: 266 RQPAEIIIATGFIASTAENIP-TTLKRDGSDFSASIIGSLVRACQVTIWTDVDGVFSADP 324
Query: 234 NICANAIPVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITK 293
+ A+ + L+++EA E++YFGA VLHP+++ P + +IP+ ++N +N APGT I K
Sbjct: 325 RKVSEAVILSTLSYQEAWEMSYFGANVLHPRTIIPVMKDNIPIVIRNMFNLSAPGTTICK 384
Query: 294 -----TRDLSKSILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCV--A 346
DL + S + ++++ T M G G + +FS +D+G +V + A
Sbjct: 385 QPANENADLDACV-KSFATIDKLALVNVEGTGMAGVPGTASAIFSAAKDVGANVIMISQA 443
Query: 347 TSEVSISLTLDPSKLWCRELIQQELDHVVEELE----------KIAVVHLLQHRSIISLI 396
+SE S+ C + ++E+ V L +++ V +++ SI++ +
Sbjct: 444 SSEHSV----------CFAVPEKEVAAVSTALHVRFREALAAGRLSKVEVIRGCSILAAV 493
Query: 397 GNVQRS----SLILEKAFNVLRRNGVNVQMISQGASKVNISLVVHDSEAKQCIQALHSAF 452
G S S IL F+ L + +NV+ I+QG S+ NI++V+ + + ++A+HS F
Sbjct: 494 GLRMASTPGVSAIL---FDALAKANINVRAIAQGCSEYNITVVLKQEDCVRALRAVHSRF 550
Query: 453 F 453
F
Sbjct: 551 F 551
>Os08g0342400 Similar to Bifunctional aspartokinase/homoserine dehydrogenase 1,
chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes:
Aspartokinase (EC 2.7.2.4)
Length = 763
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 194/376 (51%), Gaps = 34/376 (9%)
Query: 97 KGVAMMKELTPRTRDYLVSFGECMSTRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNAD 156
+ + + T D++V GE S ++ + + K G D ++ + T ++
Sbjct: 39 RAICIAGHATESFSDFVVGHGEIWSAQLLSFAIKKSGTPCSWMDTREVLVVNP---TGSN 95
Query: 157 ILEATYPAVAKRLQGDWIDDPAIPIV-TGFLGKGWKSCAVTTLGRGGSDLTATTIGKALG 215
++ Y KRL+ + PA I+ TGF+ ++ TTL R GSD +A IG +
Sbjct: 96 QVDPDYLESEKRLEKWFARQPAETIIATGFIASTPENIP-TTLKRDGSDFSAAIIGSLVK 154
Query: 216 LREIQVWKDVDGVLTCDPNICANAIPVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIP 275
++ +W DVDGV + DP + A+ + L+++EA E++YFGA VLHP+++ P + +IP
Sbjct: 155 AGQVTIWTDVDGVFSADPRKVSEAVILSTLSYQEAWEMSYFGANVLHPRTIIPVMKYNIP 214
Query: 276 VRVKNSYNRRAPGTVI-----TKTRDLSKSILTSIVLKSNITMLDIVSTRMLGQYGFLAK 330
+ ++N +N APGT+I ++ DL ++ + + ++++++ T M G G +
Sbjct: 215 IVIRNMFNISAPGTMICQQPANESGDL-EACVKAFATIDKLSLVNVEGTGMAGVPGTASA 273
Query: 331 VFSIFEDLGISVDCV--ATSEVSISLTLDPSKLWCRELIQQELDHVVEELE--------- 379
+F +D+G +V + A+SE S+ C + ++E+ V L
Sbjct: 274 IFGAVKDVGANVIMISQASSEHSV----------CFAVPEKEVAAVSAALHVRFREALSA 323
Query: 380 -KIAVVHLLQHRSIISLIG-NVQRSSLILEKAFNVLRRNGVNVQMISQGASKVNISLVVH 437
+++ V ++ + SI++ +G + + + F+ L + +NV+ I+QG S+ NI++V+
Sbjct: 324 GRLSKVEVIHNCSILAAVGLKMASTPGVSATLFDALAKANINVRAIAQGCSEYNITVVLK 383
Query: 438 DSEAKQCIQALHSAFF 453
+ + ++A HS FF
Sbjct: 384 QEDCVRALRAAHSRFF 399
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,928,121
Number of extensions: 585606
Number of successful extensions: 1636
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1630
Number of HSP's successfully gapped: 5
Length of query: 482
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 377
Effective length of database: 11,553,331
Effective search space: 4355605787
Effective search space used: 4355605787
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)