BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0848400 Os03g0848400|AK067600
(217 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0848400 B-cell receptor-associated 31-like family protein 338 1e-93
Os07g0291200 Conserved hypothetical protein 144 6e-35
Os05g0272900 B-cell receptor-associated 31-like family protein 126 9e-30
Os06g0367500 Prefoldin domain containing protein 109 1e-24
Os02g0321800 B-cell receptor-associated 31-like family protein 107 5e-24
>Os03g0848400 B-cell receptor-associated 31-like family protein
Length = 217
Score = 338 bits (868), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/196 (87%), Positives = 171/196 (87%)
Query: 22 KVGPLREVAMRGVEQAKTGKGPATVKTLACTLSVILMSSVASILKIQNRGLKLGTVSPMD 81
KVGPLREVAMRGVEQAKTGKGPATVKTLACTLSVILMSSVASILKIQNRGLKLGTVSPMD
Sbjct: 22 KVGPLREVAMRGVEQAKTGKGPATVKTLACTLSVILMSSVASILKIQNRGLKLGTVSPMD 81
Query: 82 QVLWRTHLLEASLIGFTLFLAFVIDRLHHYLRKLITLRKAANTSREEVEKLQMENRLFRX 141
QVLWRTHLLEASLIGFTLFLAFVIDRLHHYLRKLITLRKAANTSREEVEKLQMENRLFR
Sbjct: 82 QVLWRTHLLEASLIGFTLFLAFVIDRLHHYLRKLITLRKAANTSREEVEKLQMENRLFRE 141
Query: 142 XXXXXXXXXXXLHQEIAKLNESMKKLKSESEDHERKVLEAEAHVNALQKQSXXXXXXXXX 201
LHQEIAKLNESMKKLKSESEDHERKVLEAEAHVNALQKQS
Sbjct: 142 KEEKSSSEIKKLHQEIAKLNESMKKLKSESEDHERKVLEAEAHVNALQKQSEELLLEYDR 201
Query: 202 XXXXNQILQSQLHYKG 217
NQILQSQLHYKG
Sbjct: 202 LLEDNQILQSQLHYKG 217
>Os07g0291200 Conserved hypothetical protein
Length = 140
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/97 (73%), Positives = 78/97 (80%), Gaps = 7/97 (7%)
Query: 22 KVGPLREVAMRGVEQAKTGKGPATVKTLACTLSVILMSSVASILKIQNRGLKLGTVSPMD 81
K+GPLRE+AMRGVEQAK GKGPA VKTLACTL VI MSSVASIL+IQNRG+KLGTVSPMD
Sbjct: 22 KIGPLRELAMRGVEQAKDGKGPAAVKTLACTLLVIFMSSVASILRIQNRGIKLGTVSPMD 81
Query: 82 QVLWRTHLLEASLIG-------FTLFLAFVIDRLHHY 111
QVLWRTHLLEASLIG T+F+ F + Y
Sbjct: 82 QVLWRTHLLEASLIGIPLSSSSLTIFIFFTSTWWNLY 118
>Os05g0272900 B-cell receptor-associated 31-like family protein
Length = 221
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 7/190 (3%)
Query: 25 PLREVAMRGVEQAKTGKGPATVKTLACTLSVILMSSVASILKIQNRGLKLGTVSPMDQVL 84
P R +A+ +++AK G+GP VKT+A T+ V+L SS SI KI+ R LG ++P DQVL
Sbjct: 24 PFRRLALLAIDRAKRGRGPVMVKTVAATMLVVLGSSGYSIAKIRRRVGDLGQLTPTDQVL 83
Query: 85 WRTHLLEASLIGFTLFLAFVIDRLHHYLRKLITLRKAANTSREEVEKLQMENRLFRXXXX 144
HLLEASL+G++LFL +IDRLHHY+R+L T++K +E + ++R
Sbjct: 84 ASRHLLEASLMGYSLFLGLIIDRLHHYIRELRTMKK-------NMEAVTKQSRTLEEAKH 136
Query: 145 XXXXXXXXLHQEIAKLNESMKKLKSESEDHERKVLEAEAHVNALQKQSXXXXXXXXXXXX 204
+EI++LNE +++ K SE ++ AEA+ ALQKQS
Sbjct: 137 GSVEEIQQYQKEISRLNEQVQEFKRLSETKTEELKTAEANTLALQKQSEGLLTEYERLIA 196
Query: 205 XNQILQSQLH 214
N+ ++QL
Sbjct: 197 ENEEFRNQLQ 206
>Os06g0367500 Prefoldin domain containing protein
Length = 199
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 14/190 (7%)
Query: 31 MRGVEQAKTGKGPATVKTLACTLSVILMSSVASILKIQNR------GLKLGTVSPMDQVL 84
M G+++ K G+GP V+T+A T+ V+L SSV S+ KI+ R G GT++P DQVL
Sbjct: 1 MLGLDRLKRGRGPVMVRTVAATVLVVLASSVHSMNKIRGRAAGELDGAGAGTLTPTDQVL 60
Query: 85 WRTHLLEASLIGFTLFLAFVIDRLHHYLRKLITLRKAANTSREEVEKLQMENRLFRXXXX 144
HLLEASL+G++LFLA VIDRLH+Y+R++ L++ + E KL N+
Sbjct: 61 LARHLLEASLMGYSLFLALVIDRLHNYIREVRGLKR----NLEAASKL---NKTLDEAKL 113
Query: 145 XXXXXXXXLHQ-EIAKLNESMKKLKSESEDHERKVLEAEAHVNALQKQSXXXXXXXXXXX 203
+Q +IA LNE +KK+K + ++ + +AEA A QKQS
Sbjct: 114 IGSSDESKTYQKDIASLNEEIKKMKRQLKEKANEAKDAEAKALAAQKQSEGLMIEYNHLV 173
Query: 204 XXNQILQSQL 213
N+ L QL
Sbjct: 174 EDNKHLHDQL 183
>Os02g0321800 B-cell receptor-associated 31-like family protein
Length = 226
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 105/199 (52%), Gaps = 17/199 (8%)
Query: 25 PLREVAMRGVEQAKTGK-GPATVKTLACTLSVILMSSVASILKIQNRGLKL--------- 74
PLR++A+ G+++ K G+ P VKT+A + +L S++ S+ +I R
Sbjct: 24 PLRKLAVMGIDRLKRGRRAPVAVKTVAGVVLALLASTLYSMAEISGRAGGDPESGGGGGG 83
Query: 75 GTVSPMDQVLWRTHLLEASLIGFTLFLAFVIDRLHHYLRKLITLRKAANTSREEVEKLQM 134
++SP DQVL+ HLLEASL+G++LFLA VIDRLH Y+R+L L+K VE +
Sbjct: 84 ASLSPTDQVLFSRHLLEASLMGYSLFLALVIDRLHQYIRELRGLKK-------NVEAVTK 136
Query: 135 ENRLFRXXXXXXXXXXXXLHQEIAKLNESMKKLKSESEDHERKVLEAEAHVNALQKQSXX 194
N++ +EI LNE MKKLK + ++ +V AE A++KQS
Sbjct: 137 HNKMLEEAKHGRSEETKKYQEEIGALNEDMKKLKLQVQEKTEEVHVAEDKALAIRKQSES 196
Query: 195 XXXXXXXXXXXNQILQSQL 213
NQ L+ QL
Sbjct: 197 LLLEYDRLLEDNQHLREQL 215
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.131 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,375,515
Number of extensions: 127990
Number of successful extensions: 483
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 478
Number of HSP's successfully gapped: 5
Length of query: 217
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 120
Effective length of database: 11,971,043
Effective search space: 1436525160
Effective search space used: 1436525160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)