Os06g0367500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Prefoldin domain containing protein.
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Os06g0367500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Prefoldin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.05 | 0.55 | 5.79 | 1.93 | 0.63 | 1.02 | -0.732 | -4.33 | 0.0192 | 23.4 | 1.034 | 29 | -- | -- |
| 146.73 | 0.564 | 5.81 | 1.74 | 0.658 | 0.552 | -0.385 | -- | 0.0469 | 22.9 | 1.101 | 14 | -- | -- |
| 139.2 | 0.55 | 5.79 | 1.95 | 0.635 | 0.979 | -- | -3.99 | 0.0204 | 23.1 | 1.068 | 28 | -- | -- |
| 147.28 | 0.565 | 5.83 | 1.74 | 0.651 | 0.554 | -- | -- | 0.00432 | 22.9 | 1.111 | 14 | -- | -- |
| 164.09 | 0.597 | 5.77 | 1.95 | -- | 0.873 | -- | -4.05 | 0.0287 | -- | 1.088 | 28 | -- | -- |
| 155.02 | 0.584 | 5.83 | 1.68 | 0.64 | -- | -0.423 | -- | 0.0023 | 22 | -- | -- | -- | -- |
| 155.7 | 0.584 | 5.83 | 1.7 | 0.644 | -- | -- | -- | 0.00372 | 21.9 | -- | -- | -- | -- |
| 173.06 | 0.613 | 5.81 | 1.77 | -- | 0.49 | -- | -- | -0.00299 | -- | 1.109 | 14 | -- | -- |
| 226.83 | 0.701 | 5.88 | -- | 0.646 | 0.405 | -- | -- | -0.197 | 22.8 | 1.153 | 8 | -- | -- |
| 180.48 | 0.628 | 5.81 | 1.7 | -- | -- | -- | -- | 0.0035 | -- | -- | -- | -- | -- |
| 231.42 | 0.712 | 5.87 | -- | 0.65 | -- | -- | -- | -0.185 | 22.1 | -- | -- | -- | -- |
| 253.44 | 0.741 | 5.86 | -- | -- | 0.319 | -- | -- | -0.197 | -- | 1.162 | 8 | -- | -- |
| 256.89 | 0.748 | 5.85 | -- | -- | -- | -- | -- | -0.185 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.95 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 18 |
| 2 | 132.23 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 3 | 132.27 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 4 | 132.40 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 13 |
| 5 | 132.41 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 11 |
| 7 | 132.43 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 6 |
| 10 | 132.47 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 24 | 132.78 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 26 | 132.79 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 32 | 132.79 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 37 | 132.80 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 51 | 132.96 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 56 | 133.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 61 | 133.07 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 17 | 15 |
| 62 | 133.08 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 69 | 133.13 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 78 | 133.20 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 84 | 133.23 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 85 | 133.23 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 17 | 15 |
| 86 | 133.24 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 99 | 133.30 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 15 | 5 |
| 101 | 133.31 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 113 | 133.38 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 116 | 133.38 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 15 |
| 139 | 133.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 141 | 133.49 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 151 | 133.56 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 155 | 133.57 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 165 | 133.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 8 |
| 176 | 133.61 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 179 | 133.62 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 188 | 133.65 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 189 | 133.65 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 14 | 18 |
| 190 | 133.66 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 193 | 133.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 207 | 133.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 210 | 133.67 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 14 | 19 |
| 211 | 133.67 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 220 | 133.70 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 243 | 133.74 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 253 | 133.77 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 268 | 133.81 | humidity | 90.0 | 43200 | < th | dose independent | sin | 20 | NA |
| 342 | 133.93 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 351 | 133.95 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 355 | 133.96 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 6 |
| 373 | 134.00 | humidity | 90.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 376 | 134.00 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 380 | 134.01 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 17 |
| 415 | 134.05 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 417 | 134.05 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 11 |
| 424 | 134.07 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 495 | 134.13 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 17 |
| 514 | 134.16 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 526 | 134.17 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 556 | 134.21 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 569 | 134.22 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 572 | 134.22 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 13 | 20 |
| 575 | 134.23 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 594 | 134.26 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 17 | 10 |
| 615 | 134.29 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 619 | 134.29 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 628 | 134.30 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 657 | 134.35 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 663 | 134.35 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 666 | 134.36 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 682 | 134.38 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 737 | 134.44 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 752 | 134.45 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 17 | 6 |
| 789 | 134.48 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 23 |
| 804 | 134.50 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 812 | 134.51 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 817 | 134.51 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 837 | 134.52 | radiation | 10.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 841 | 134.52 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 856 | 134.53 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 859 | 134.53 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 21 | NA |
| 915 | 134.59 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 19 |
| 980 | 134.64 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 12 |