Os02g0321800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : B-cell receptor-associated 31-like family protein.
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Os02g0321800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : B-cell receptor-associated 31-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.15 | 0.294 | 7.96 | 1.27 | 0.644 | 0.64 | 0.599 | 0.762 | 0.197 | 16.8 | 24.2 | 22 | -- | -- |
| 39.99 | 0.295 | 7.94 | 1.37 | 0.648 | 0.564 | 0.425 | -- | 0.227 | 16.9 | 24.69 | 28 | -- | -- |
| 39.99 | 0.295 | 7.95 | 1.29 | 0.65 | 0.622 | -- | 0.609 | 0.202 | 16.8 | 24.22 | 34 | -- | -- |
| 40.45 | 0.296 | 7.94 | 1.37 | 0.647 | 0.565 | -- | -- | 0.226 | 16.9 | 24.5 | 30 | -- | -- |
| 61.14 | 0.366 | 7.95 | 1.25 | -- | 0.392 | -- | 0.383 | 0.157 | -- | 24.1 | 16 | -- | -- |
| 44.48 | 0.313 | 7.97 | 1.24 | 0.591 | -- | 0.501 | -- | 0.123 | 17.5 | -- | -- | -- | -- |
| 45.09 | 0.314 | 7.97 | 1.24 | 0.594 | -- | -- | -- | 0.125 | 17.4 | -- | -- | -- | -- |
| 61.39 | 0.365 | 7.95 | 1.29 | -- | 0.361 | -- | -- | 0.163 | -- | 24.09 | 12 | -- | -- |
| 85.17 | 0.43 | 8 | -- | 0.533 | -0.203 | -- | -- | -0.0356 | 17.8 | 34.89 | 10 | -- | -- |
| 63.46 | 0.372 | 7.96 | 1.22 | -- | -- | -- | -- | 0.11 | -- | -- | -- | -- | -- |
| 85.58 | 0.433 | 8 | -- | 0.573 | -- | -- | -- | -0.013 | 17.5 | -- | -- | -- | -- |
| 93.2 | 0.45 | 8.01 | -- | -- | -0.768 | -- | -- | -0.113 | -- | 62.5 | 337 | -- | -- |
| 102.68 | 0.473 | 7.99 | -- | -- | -- | -- | -- | -0.0249 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.21 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 4 | 37.46 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 19 | 38.19 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 10 |
| 20 | 38.20 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 8 |
| 28 | 38.30 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 6 |
| 54 | 38.60 | temperature | 25 | 720 | > th | dose independent | sin | 16 | NA |
| 58 | 38.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 60 | 38.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 85 | 38.76 | temperature | 20 | 30 | > th | dose dependent | rect. | 20 | 10 |
| 115 | 38.95 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 1 |
| 126 | 38.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 128 | 38.99 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 167 | 39.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 170 | 39.16 | humidity | 80 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 197 | 39.24 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 199 | 39.25 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 205 | 39.26 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 206 | 39.26 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 207 | 39.27 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 210 | 39.27 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 211 | 39.27 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 222 | 39.28 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 228 | 39.29 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 235 | 39.29 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 236 | 39.30 | temperature | 25 | 720 | < th | dose independent | sin | 16 | NA |
| 241 | 39.30 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 249 | 39.32 | temperature | 25 | 720 | > th | dose dependent | sin | 13 | NA |
| 254 | 39.32 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 416 | 39.59 | temperature | 25 | 720 | < th | dose independent | rect. | 23 | 1 |
| 453 | 39.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 12 |
| 482 | 39.64 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 1 |
| 492 | 39.65 | temperature | 25 | 720 | < th | dose independent | rect. | 12 | 18 |
| 493 | 39.65 | temperature | 25 | 30 | < th | dose dependent | sin | 9 | NA |
| 887 | 40.06 | temperature | 25 | 720 | > th | dose independent | rect. | 22 | 2 |
| 914 | 40.08 | temperature | 10 | 30 | > th | dose dependent | sin | 10 | NA |