BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0321800 Os02g0321800|AK070852
(226 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42570.1 | chr5:17021459-17022497 REVERSE LENGTH=219 180 7e-46
AT1G11905.1 | chr1:4014958-4016222 FORWARD LENGTH=222 156 9e-39
AT5G48660.1 | chr5:19736986-19738327 FORWARD LENGTH=220 106 8e-24
AT3G07190.1 | chr3:2285979-2287155 REVERSE LENGTH=221 103 8e-23
AT3G20450.1 | chr3:7130723-7131239 REVERSE LENGTH=138 80 1e-15
>AT5G42570.1 | chr5:17021459-17022497 REVERSE LENGTH=219
Length = 218
Score = 180 bits (456), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 127/199 (63%), Gaps = 10/199 (5%)
Query: 22 KTPLRKLAVMGIDRLKRGRRAPVAVKTVAGVVLALLASTLYSMAEIXXXXXXXXXXXXXX 81
KTPLRKL ++ DR+KRGR PV VKT+ V +L S++YS+ I
Sbjct: 22 KTPLRKLIILTFDRIKRGR-GPVVVKTIGTTVFVVLLSSIYSLVNIQRRSEDGAVLN--- 77
Query: 82 XXXXXXPTDQVLFSRHLLEASLMGYSLFLALVIDRLHQYIRELRGLKKNVEAVTKHNKML 141
PTDQVL S+HLLEASLMG+ LFL+L+IDRLH YIRELR L+K +E K N+
Sbjct: 78 ------PTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLRKTMETAKKQNRGF 131
Query: 142 EEAKHGRSEETKKYQEEIGALNEDMKKLKLQVQEKTEEVHVAEDKALAIRKQSESLLLEY 201
E+ K EE K EEI AL +K L+ + + K +E+ A+ + A+RKQ++ L+EY
Sbjct: 132 EDGKTTSGEEVKALGEEIAALKAKIKTLESESESKGKELKGAQGETEALRKQADGFLMEY 191
Query: 202 DRLLEDNQHLREQLQSIDH 220
DRLLEDNQ+LR QL+SI H
Sbjct: 192 DRLLEDNQNLRNQLESIGH 210
>AT1G11905.1 | chr1:4014958-4016222 FORWARD LENGTH=222
Length = 221
Score = 156 bits (394), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 128/198 (64%), Gaps = 10/198 (5%)
Query: 22 KTPLRKLAVMGIDRLKRGRRAPVAVKTVAGVVLALLASTLYSMAEIXXXXXXXXXXXXXX 81
KTP+RKL +M +DR KRGR PV ++TV+ V+ LL +++Y+M I
Sbjct: 22 KTPIRKLLIMSLDRSKRGR-GPVVIQTVSATVIVLLVTSVYNMMGIQKRWIEDGVVN--- 77
Query: 82 XXXXXXPTDQVLFSRHLLEASLMGYSLFLALVIDRLHQYIRELRGLKKNVEAVTKHNKML 141
PTD+V+ ++HLLE++LMG LFL L+IDRLH Y+RELR +KN+E + K +L
Sbjct: 78 ------PTDEVIMAKHLLESTLMGGFLFLGLMIDRLHHYMRELRIRRKNMEVIKKEGALL 131
Query: 142 EEAKHGRSEETKKYQEEIGALNEDMKKLKLQVQEKTEEVHVAEDKALAIRKQSESLLLEY 201
E K +E K EEI +L + ++L +++ +++E+ + A+A++KQSE L+E+
Sbjct: 132 EGVKARGLDEVKNLMEEITSLRKRQEQLDSELEARSKEIRTEKTSAVALQKQSEGFLIEF 191
Query: 202 DRLLEDNQHLREQLQSID 219
+RLLE+NQ LR+QL ++D
Sbjct: 192 NRLLEENQVLRDQLHTVD 209
>AT5G48660.1 | chr5:19736986-19738327 FORWARD LENGTH=220
Length = 219
Score = 106 bits (265), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 117/199 (58%), Gaps = 17/199 (8%)
Query: 24 PLRKLAVMGIDRLKRGRRAPVAVKTVAGVVLALLASTLYSMAEIXXXXXXXXXXXXXXXX 83
PLR+L + +D++K G+ P VKT+AG + +L S L S+ +I
Sbjct: 25 PLRELVIKSLDQMKMGK-GPATVKTIAGTMSVILFSNLMSIVKIQNKGAKLGTMS----- 78
Query: 84 XXXXPTDQVLFSRHLLEASLMGYSLFLALVIDRLHQYIRELRGLKKNV-------EAVTK 136
P DQVL+ HLLEASL+G LFL +IDR+H Y+R+L L+ NV E + K
Sbjct: 79 ----PMDQVLWRTHLLEASLLGVVLFLGFIIDRMHHYLRKLINLRSNVGSSKEELEQLQK 134
Query: 137 HNKMLEEAKHGRSEETKKYQEEIGALNEDMKKLKLQVQEKTEEVHVAEDKALAIRKQSES 196
L+E + S+E K+ Q ++ ++ E +KK + + +EK +++ AE A++KQS
Sbjct: 135 ERTELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKLETAETHVTALQKQSAE 194
Query: 197 LLLEYDRLLEDNQHLREQL 215
LLLEYDRLLEDNQHL+ Q+
Sbjct: 195 LLLEYDRLLEDNQHLQSQI 213
>AT3G07190.1 | chr3:2285979-2287155 REVERSE LENGTH=221
Length = 220
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 117/199 (58%), Gaps = 17/199 (8%)
Query: 24 PLRKLAVMGIDRLKRGRRAPVAVKTVAGVVLALLASTLYSMAEIXXXXXXXXXXXXXXXX 83
PLR+L + +D+LK G+R P +KT+AG + +L S L ++ +I
Sbjct: 25 PLRELVMKSLDQLKLGKR-PATLKTIAGTMSVILLSNLMNIIKIQNKGAKLGTMS----- 78
Query: 84 XXXXPTDQVLFSRHLLEASLMGYSLFLALVIDRLHQYIRELRGLKKNV-------EAVTK 136
P DQVL+ HLLEASLMG LF +IDR H Y+ +L L+ NV E + K
Sbjct: 79 ----PMDQVLWRTHLLEASLMGVVLFFGFIIDRTHHYLEKLITLRSNVGSSKGELEELRK 134
Query: 137 HNKMLEEAKHGRSEETKKYQEEIGALNEDMKKLKLQVQEKTEEVHVAEDKALAIRKQSES 196
L+E + S+E K+ +E++ ++E++KKL+ + +EK ++ AE A++KQS
Sbjct: 135 ERIELKEKEEKTSKEIKQLKEKLSCVSENLKKLEKESKEKETKLETAEAHVTALQKQSSE 194
Query: 197 LLLEYDRLLEDNQHLREQL 215
LLLEYDRLLEDNQ+L+ Q+
Sbjct: 195 LLLEYDRLLEDNQNLQSQI 213
>AT3G20450.1 | chr3:7130723-7131239 REVERSE LENGTH=138
Length = 137
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 23 TPLRKLAVMGIDRLKRGRRAPVAVKTVAGVVLALLASTLYSMAEIXXXXXXXXXXXXXXX 82
TP R++ V +D K+GR AP+ KTVA +L L S ++S +I
Sbjct: 27 TPARRVVVKLLDLSKQGR-APLVAKTVAATMLVLFGSVMFSTIQIHTRVSESGGVAN--- 82
Query: 83 XXXXXPTDQVLFSRHLLEASLMGYSLFLALVIDRLHQYIRELRGLKKNVEAVTKHNK 139
TDQV+F+ LLEA LMG LFLA+VIDR+H Y REL+ ++N+E K K
Sbjct: 83 -----STDQVMFANRLLEAFLMGTVLFLAMVIDRMHYYTRELQITRRNLEIAVKKGK 134
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.132 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,347,227
Number of extensions: 114343
Number of successful extensions: 1310
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1306
Number of HSP's successfully gapped: 5
Length of query: 226
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 131
Effective length of database: 8,502,049
Effective search space: 1113768419
Effective search space used: 1113768419
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)