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Os07g0291200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.62 (0.015) R2 : 0.000829
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0195 (0.0317) R2dN8 : 0.00107 R2N8 : 0.000829
σ : 0.283
deviance : 36.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
16.89 0.193 9.62 0.134 0.679 -1.23 -0.239 0.979 -0.00585 3.72 0.5124 688 -- --
17.36 0.194 9.61 0.168 0.735 -1.34 0.423 -- 0.00219 4.05 0.4956 696 -- --
16.95 0.192 9.62 0.152 0.682 -1.23 -- 0.729 -0.0039 3.7 0.4855 685 -- --
17.85 0.197 9.61 0.168 0.745 -1.32 -- -- 0.00889 3.94 0.48 691 -- --
17.48 0.195 9.63 0.139 -- -0.822 -- 0.914 -0.00389 -- 0.4572 996 -- --
20.99 0.215 9.62 0.277 0.5 -- -0.333 -- 0.058 19.8 -- -- -- --
21.3 0.216 9.63 0.285 0.499 -- -- -- 0.0573 19.8 -- -- -- --
18.23 0.199 9.62 0.183 -- -0.846 -- -- 0.00653 -- 0.4799 1018 -- --
18.5 0.2 9.62 -- 0.843 -1.43 -- -- -0.0249 4.05 0.44 686 -- --
34.79 0.276 9.61 0.279 -- -- -- -- 0.0504 -- -- -- -- --
23.44 0.226 9.63 -- 0.497 -- -- -- 0.0256 19.9 -- -- -- --
19.03 0.203 9.63 -- -- -0.883 -- -- -0.0196 -- 0.39 1030 -- --
36.85 0.283 9.62 -- -- -- -- -- 0.0195 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.59 radiation 1.0 720 < th dose dependent rect. 23 22
2 16.68 wind 9.0 43200 > th dose dependent rect. 19 2
8 16.83 radiation 1.0 4320 > th dose independent rect. 4 1
18 16.83 radiation 1.0 4320 > th dose dependent rect. 4 1
30 16.94 wind 9.0 43200 > th dose independent rect. 18 3
32 16.97 radiation 1.0 43200 > th dose independent rect. 7 1
33 16.97 radiation 1.0 43200 < th dose independent rect. 7 1
34 17.00 radiation 1.0 720 < th dose dependent rect. 5 16
36 17.02 radiation 1.0 720 < th dose dependent rect. 17 10
37 17.03 wind 9.0 43200 < th dose independent rect. 18 3
62 17.07 radiation 10.0 4320 < th dose independent rect. 4 2
65 17.09 radiation 10.0 4320 < th dose independent rect. 1 5
66 17.09 radiation 10.0 4320 < th dose independent rect. 20 10
67 17.09 radiation 1.0 720 < th dose dependent sin 13 NA
68 17.09 radiation 1.0 720 < th dose dependent rect. 8 22
74 17.10 radiation 1.0 720 < th dose independent rect. 8 13
75 17.10 radiation 1.0 43200 < th dose dependent rect. 7 1
76 17.11 radiation 10.0 4320 < th dose independent rect. 22 8
78 17.11 radiation 1.0 720 < th dose dependent rect. 7 14
79 17.12 wind 9.0 43200 < th dose independent rect. 18 1
86 17.14 radiation 1.0 720 < th dose independent rect. 15 6
88 17.14 radiation 1.0 720 < th dose dependent rect. 15 6
90 17.14 radiation 1.0 720 < th dose dependent rect. 15 15
94 17.16 radiation 1.0 720 < th dose dependent rect. 15 23
98 17.18 radiation 10.0 14400 < th dose independent rect. 18 6
102 17.19 temperature 30.0 90 < th dose dependent rect. 11 20
104 17.19 radiation 1.0 720 < th dose dependent rect. 5 23
114 17.21 radiation 1.0 720 < th dose dependent rect. 13 22
133 17.23 temperature 10.0 720 > th dose dependent rect. 12 6
165 17.25 humidity 70.0 43200 > th dose independent rect. 8 1
171 17.25 radiation 1.0 1440 < th dose dependent rect. 17 12
175 17.25 temperature 10.0 720 > th dose dependent rect. 21 21
177 17.26 radiation 1.0 720 < th dose dependent no NA NA
182 17.27 radiation 1.0 1440 < th dose dependent rect. 17 2
193 17.28 humidity 70.0 43200 < th dose independent rect. 8 1
194 17.28 radiation 10.0 14400 < th dose independent rect. 18 1
198 17.28 radiation 1.0 720 < th dose independent rect. 17 10
211 17.29 radiation 10.0 14400 < th dose independent rect. 18 8
212 17.29 radiation 1.0 14400 < th dose dependent rect. 18 1
223 17.30 wind 3.0 43200 > th dose dependent rect. 15 1
242 17.32 wind 5.0 43200 < th dose independent rect. 15 4
245 17.32 radiation 1.0 720 < th dose independent rect. 23 22
246 17.32 atmosphere 1010.0 4320 > th dose dependent rect. 6 1
255 17.34 wind 5.0 43200 > th dose independent rect. 15 1
258 17.34 wind 5.0 43200 > th dose independent rect. 15 4
264 17.34 wind 3.0 43200 > th dose dependent rect. 14 5
265 17.34 wind 9.0 43200 > th dose dependent rect. 18 7
268 17.34 temperature 30.0 90 < th dose dependent rect. 9 22
296 17.36 wind 5.0 43200 < th dose independent rect. 15 1
299 17.36 radiation 1.0 720 > th dose independent rect. 12 7
310 17.36 wind 9.0 43200 < th dose dependent rect. 14 2
318 17.37 humidity 60.0 43200 > th dose independent rect. 8 3
325 17.37 radiation 1.0 720 < th dose independent rect. 8 19
326 17.37 humidity 90.0 43200 > th dose dependent rect. 8 1
353 17.38 wind 9.0 43200 > th dose dependent rect. 18 12
376 17.39 wind 9.0 43200 < th dose dependent rect. 13 6
389 17.40 radiation 1.0 720 > th dose independent rect. 11 22
400 17.40 wind 9.0 43200 < th dose dependent rect. 13 8
405 17.40 radiation 1.0 720 < th dose dependent rect. 7 20
481 17.44 radiation 10.0 14400 < th dose dependent rect. 3 2
490 17.45 humidity 50.0 43200 > th dose independent rect. 18 1
491 17.45 radiation 1.0 14400 > th dose independent rect. 10 1
534 17.46 precipitation 0.1 43200 > th dose independent rect. 23 1
545 17.46 precipitation 0.1 43200 > th dose dependent rect. 23 1
574 17.47 radiation 40.0 43200 < th dose independent rect. 15 8
595 17.47 temperature 10.0 270 > th dose dependent rect. 4 22
598 17.48 humidity 50.0 43200 > th dose independent rect. 12 1
600 17.48 radiation 1.0 14400 < th dose independent rect. 10 1
601 17.48 precipitation 0.1 43200 < th dose independent rect. 23 1
605 17.48 radiation 40.0 43200 < th dose independent rect. 15 6
614 17.48 radiation 1.0 14400 < th dose dependent rect. 10 1
615 17.48 precipitation 0.1 43200 < th dose dependent rect. 23 1
627 17.49 radiation 40.0 43200 < th dose independent rect. 15 1
661 17.50 radiation 40.0 43200 < th dose independent rect. 15 15
665 17.50 humidity 80.0 43200 < th dose dependent rect. 11 1
685 17.50 humidity 70.0 14400 < th dose dependent rect. 19 13
686 17.50 radiation 1.0 14400 < th dose dependent rect. 18 14
709 17.52 wind 9.0 43200 > th dose independent rect. 24 1
716 17.52 wind 9.0 43200 > th dose independent rect. 18 7
722 17.52 wind 9.0 43200 > th dose dependent rect. 24 1
735 17.52 temperature 30.0 10 < th dose dependent rect. 10 21
739 17.53 humidity 50.0 43200 < th dose independent rect. 18 1
741 17.53 wind 7.0 14400 > th dose independent rect. 5 2
776 17.54 atmosphere 1010.0 4320 > th dose dependent rect. 9 1
781 17.54 humidity 80.0 43200 < th dose dependent rect. 8 5
792 17.54 temperature 30.0 10 < th dose dependent rect. 9 23
794 17.55 humidity 50.0 43200 > th dose independent rect. 14 1
815 17.55 humidity 90.0 43200 < th dose dependent rect. 8 1
826 17.56 wind 9.0 43200 < th dose independent rect. 24 1
828 17.56 humidity 50.0 43200 < th dose independent rect. 14 1
867 17.57 atmosphere 1010.0 4320 > th dose independent rect. 9 2
903 17.58 atmosphere 1010.0 4320 < th dose independent rect. 9 2
916 17.58 wind 3.0 43200 < th dose dependent rect. 20 1
933 17.58 temperature 15.0 720 > th dose dependent rect. 4 14
939 17.58 temperature 10.0 720 > th dose dependent rect. 12 21
941 17.59 atmosphere 1005.0 43200 > th dose independent rect. 16 1
979 17.60 humidity 70.0 43200 > th dose independent rect. 5 7