Os03g0848400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : B-cell receptor-associated 31-like family protein.
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Os03g0848400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : B-cell receptor-associated 31-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.04 | 0.431 | 5.85 | -1.15 | 0.835 | 1.41 | -0.259 | -0.869 | -0.0721 | 19.8 | 16 | 1310 | -- | -- |
| 84.71 | 0.429 | 5.83 | -0.952 | 0.817 | 1.46 | -0.259 | -- | -0.0189 | 19.7 | 15.32 | 1250 | -- | -- |
| 84.21 | 0.427 | 5.85 | -1.14 | 0.834 | 1.39 | -- | -0.856 | -0.0716 | 19.8 | 16.29 | 1300 | -- | -- |
| 84.9 | 0.429 | 5.83 | -0.937 | 0.82 | 1.44 | -- | -- | -0.0154 | 19.7 | 15.59 | 1248 | -- | -- |
| 95.63 | 0.455 | 5.81 | -1.05 | -- | 1.96 | -- | -0.635 | -0.0687 | -- | 15.8 | 689 | -- | -- |
| 121.64 | 0.517 | 5.77 | -0.495 | 0.836 | -- | -0.227 | -- | 0.25 | 20.4 | -- | -- | -- | -- |
| 121.8 | 0.517 | 5.77 | -0.488 | 0.836 | -- | -- | -- | 0.25 | 20.4 | -- | -- | -- | -- |
| 96.15 | 0.457 | 5.81 | -0.989 | -- | 2.01 | -- | -- | -0.0634 | -- | 14.9 | 670 | -- | -- |
| 104.98 | 0.477 | 5.78 | -- | 0.785 | 1.05 | -- | -- | 0.144 | 19.6 | 16.66 | 1132 | -- | -- |
| 160.8 | 0.593 | 5.74 | -0.492 | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
| 128.07 | 0.529 | 5.75 | -- | 0.839 | -- | -- | -- | 0.305 | 20.4 | -- | -- | -- | -- |
| 119.17 | 0.508 | 5.78 | -- | -- | 1.56 | -- | -- | 0.091 | -- | 16.25 | 632 | -- | -- |
| 167.19 | 0.604 | 5.73 | -- | -- | -- | -- | -- | 0.296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 83.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 4 | 83.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 6 | 83.05 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 17 |
| 7 | 83.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 14 | 83.24 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 38 | 83.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 15 |
| 53 | 83.51 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 57 | 83.53 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 78 | 83.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 79 | 83.62 | temperature | 15 | 1440 | > th | dose dependent | sin | 12 | NA |
| 80 | 83.62 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 112 | 83.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 139 | 83.83 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 5 |
| 199 | 83.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 220 | 84.03 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 221 | 84.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 291 | 84.17 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 342 | 84.26 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 468 | 84.44 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 481 | 84.45 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 493 | 84.47 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 546 | 84.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 639 | 84.68 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 783 | 84.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 995 | 85.17 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |