Os05g0272900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : B-cell receptor-associated 31-like family protein.
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Os05g0272900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : B-cell receptor-associated 31-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.45 | 0.371 | 7.41 | 0.99 | 0.437 | 1.01 | -0.72 | -2.4 | 0.252 | 23 | 25.17 | 15 | -- | -- |
| 64.45 | 0.374 | 7.38 | 1.26 | 0.416 | 0.8 | -0.535 | -- | 0.314 | 22.7 | 24.7 | 23 | -- | -- |
| 64.38 | 0.374 | 7.4 | 1.1 | 0.431 | 0.957 | -- | -1.77 | 0.282 | 22.7 | 25.3 | 18 | -- | -- |
| 65.47 | 0.377 | 7.38 | 1.29 | 0.421 | 0.797 | -- | -- | 0.312 | 22.6 | 24.68 | 18 | -- | -- |
| 66.99 | 0.381 | 7.38 | 1.08 | -- | 1.01 | -- | -2.36 | 0.331 | -- | 27.1 | 464 | -- | -- |
| 74.87 | 0.406 | 7.36 | 1.4 | 0.405 | -- | -0.326 | -- | 0.39 | 19.9 | -- | -- | -- | -- |
| 75.14 | 0.406 | 7.36 | 1.41 | 0.409 | -- | -- | -- | 0.39 | 19.7 | -- | -- | -- | -- |
| 66.91 | 0.381 | 7.35 | 1.3 | -- | 0.799 | -- | -- | 0.377 | -- | 26.6 | 473 | -- | -- |
| 106.35 | 0.48 | 7.42 | -- | 0.429 | 1.11 | -- | -- | 0.0975 | 0.431 | 23.24 | 142 | -- | -- |
| 84.12 | 0.429 | 7.35 | 1.41 | -- | -- | -- | -- | 0.384 | -- | -- | -- | -- | -- |
| 127.79 | 0.529 | 7.39 | -- | 0.398 | -- | -- | -- | 0.233 | 19.9 | -- | -- | -- | -- |
| 102.24 | 0.471 | 7.42 | -- | -- | 1.42 | -- | -- | 0.0552 | -- | 13.57 | 637 | -- | -- |
| 136.41 | 0.545 | 7.38 | -- | -- | -- | -- | -- | 0.228 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.83 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 31 | 56.43 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 14 |
| 47 | 57.34 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 21 |
| 62 | 57.63 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 72 | 57.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 80 | 57.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 90 | 58.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 10 |
| 107 | 58.30 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 10 |
| 112 | 58.32 | temperature | 15 | 30 | > th | dose dependent | rect. | 6 | 16 |
| 121 | 58.43 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 3 |
| 279 | 59.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 5 |
| 311 | 59.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 9 |
| 384 | 60.28 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 404 | 60.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 3 |
| 408 | 60.39 | humidity | 70 | 270 | > th | dose independent | rect. | 17 | 11 |
| 416 | 60.45 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 5 |
| 452 | 60.66 | temperature | 30 | 270 | < th | dose independent | rect. | 8 | 11 |
| 454 | 60.67 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 1 |
| 538 | 61.06 | temperature | 30 | 270 | < th | dose independent | rect. | 17 | 11 |
| 540 | 61.07 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 10 |
| 545 | 61.08 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 553 | 61.12 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 2 |
| 555 | 61.12 | temperature | 25 | 30 | > th | dose dependent | rect. | 1 | 21 |
| 565 | 61.15 | temperature | 25 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 591 | 61.23 | humidity | 50 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 621 | 61.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 7 |
| 668 | 61.47 | radiation | 1 | 30 | > th | dose independent | rect. | 16 | 19 |
| 793 | 61.78 | radiation | 1 | 90 | < th | dose independent | sin | 11 | NA |
| 818 | 61.85 | temperature | 25 | 90 | > th | dose independent | rect. | 3 | 17 |
| 948 | 62.15 | temperature | 30 | 720 | < th | dose independent | rect. | 22 | 14 |
| 966 | 62.19 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 2 |
| 983 | 62.22 | temperature | 25 | 720 | < th | dose independent | sin | 5 | NA |
| 992 | 62.23 | radiation | 10 | 270 | < th | dose dependent | rect. | 17 | 11 |
| 1000 | 62.25 | temperature | 30 | 720 | > th | dose independent | rect. | 10 | 6 |